iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xtr-131762

Ensembl Protein ID

ENSXETP00000007871.4

UniProt Accession

K9J7Q2; K9J7Q2_XENTR

Genbank Protein ID

ENSXETP00000007871

Protein Name

Lysine (K)-specific demethylase 5A

Genbank Nucleotide ID

AAMC01120299

Gene Name

kdm5a

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000003642.4	ENSXETT00000007871.4	ENSXETP00000007871.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.40e-17	62.2	250	297

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +Cl+C++g+ ++ +l+ C+ C++ +H  Cl ++  +e+p+ + w CpkC +
   Q: 250  ICLFCARGDCED-KLLLCDGCDDSYHTFCLIPP-LSEVPKGD-WRCPKCVA 297
           7********987.6*******************.*******7.******75 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

RLFGMATYIE FVPPPECPVF EPSWEEFSDP LSFIGRIRPI AEKTGICKIR PPKDWQPPFA 60
CDVKSFCFTP RVQRLNELEG SIVCSRTVAD ITGGAWEVTP PSCVTPFALL LFLLRPSCPQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCTTGTTTG GAATGGCCAC CTACATCGAA TTTGTGCCCC CTCCGGAATG CCCGGTGTTC 60
GAGCCCAGCT GGGAGGAATT CTCTGATCCC CTGAGTTTCA TCGGACGCAT CCGGCCGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002061	Ailuropoda melanoleuca	76.69	0.00e+00	2230.00
IUUC-Apl-004141	Anas platyrhynchos	76.19	0.00e+00	2272.00
IUUC-Aca-004952	Anolis carolinensis	83.21	0.00e+00	2216.00
IUUC-Ame-011323	Astyanax mexicanus	75.60	0.00e+00	2006.00
IUUC-Bgr-012241	Blumeria graminis	30.16	2.00e-111	397.00
IUUC-Bta-012902	Bos taurus	76.31	0.00e+00	2262.00
IUUC-Bci-013992	Botrytis cinerea	34.94	7.00e-104	372.00
IUUC-Cja-018988	Callithrix jacchus	82.31	0.00e+00	2158.00
IUUC-Cfa-020212	Canis familiaris	75.72	0.00e+00	2195.00
IUUC-Cpo-022221	Cavia porcellus	83.84	0.00e+00	1788.00
IUUC-Csa-023575	Chlorocebus sabaeus	76.80	0.00e+00	2200.00
IUUC-Cho-024280	Choloepus hoffmanni	72.85	0.00e+00	2033.00
IUUC-Cin-025321	Ciona intestinalis	49.81	0.00e+00	1008.00
IUUC-Cgl-026613	Colletotrichum gloeosporioides	29.08	5.00e-107	383.00
IUUC-Dre-027909	Danio rerio	74.34	0.00e+00	1595.00
IUUC-Dno-029473	Dasypus novemcinctus	83.88	0.00e+00	2073.00
IUUC-Dor-030281	Dipodomys ordii	81.77	0.00e+00	1077.00
IUUC-Eca-034265	Equus caballus	75.90	0.00e+00	2246.00
IUUC-Fca-035476	Felis catus	76.74	0.00e+00	2230.00
IUUC-Fal-037078	Ficedula albicollis	75.88	0.00e+00	1979.00
IUUC-Fso-038127	Fusarium solani	29.10	5.00e-109	389.00
IUUC-Gga-040466	Gallus gallus	76.90	0.00e+00	2204.00
IUUC-Gac-042566	Gasterosteus aculeatus	67.06	0.00e+00	1925.00
IUUC-Ggo-044524	Gorilla gorilla	77.84	0.00e+00	1940.00
IUUC-Hsa-045821	Homo sapiens	77.06	0.00e+00	2264.00
IUUC-Kpa-049245	Komagataella pastoris	21.38	6.00e-28	120.00
IUUC-Lch-050630	Latimeria chalumnae	67.65	0.00e+00	1842.00
IUUC-Lpe-051537	Leersia perrieri	29.67	1.00e-87	318.00
IUUC-Loc-051963	Lepisosteus oculatus	77.88	0.00e+00	1784.00
IUUC-Laf-053918	Loxodonta africana	70.47	0.00e+00	1914.00
IUUC-Mcc-055672	Macaca mulatta	75.93	0.00e+00	2265.00
IUUC-Mor-057198	Magnaporthe oryzae	30.09	3.00e-116	413.00
IUUC-Mtr-058113	Medicago truncatula	31.71	8.00e-93	335.00
IUUC-Mga-059192	Meleagris gallopavo	66.69	0.00e+00	1760.00
IUUC-Mmr-060968	Microcebus murinus	75.45	0.00e+00	2250.00
IUUC-Mdo-062945	Monodelphis domestica	77.61	0.00e+00	2207.00
IUUC-Mmu-063614	Mus musculus	76.80	0.00e+00	2257.00
IUUC-Mpu-066349	Mustela putorius furo	76.43	0.00e+00	2170.00
IUUC-Mlu-067363	Myotis lucifugus	76.63	0.00e+00	2294.00
IUUC-Nle-070142	Nomascus leucogenys	77.00	0.00e+00	2271.00
IUUC-Opr-071002	Ochotona princeps	76.47	0.00e+00	1209.00
IUUC-Ont-072471	Oreochromis niloticus	78.03	0.00e+00	1847.00
IUUC-Oan-072797	Ornithorhynchus anatinus	73.53	0.00e+00	1517.00
IUUC-Ocu-074164	Oryctolagus cuniculus	75.75	0.00e+00	2279.00
IUUC-Obr-076296	Oryza brachyantha	38.74	2.00e-86	315.00
IUUC-Opu-083164	Oryza punctata	28.99	2.00e-83	304.00
IUUC-Ola-087076	Oryzias latipes	76.14	0.00e+00	1777.00
IUUC-Oga-088350	Otolemur garnettii	78.13	0.00e+00	2261.00
IUUC-Oar-090045	Ovis aries	76.31	0.00e+00	2263.00
IUUC-Ptr-091199	Pan troglodytes	77.15	0.00e+00	2262.00
IUUC-Pan-092094	Papio anubis	74.52	0.00e+00	2093.00
IUUC-Psi-093550	Pelodiscus sinensis	76.29	0.00e+00	2090.00
IUUC-Pno-094879	Phaeosphaeria nodorum	28.50	9.00e-110	392.00
IUUC-Pfo-097266	Poecilia formosa	77.36	0.00e+00	1813.00
IUUC-Pab-098576	Pongo abelii	77.06	0.00e+00	2260.00
IUUC-Pca-100123	Procavia capensis	80.97	0.00e+00	1436.00
IUUC-Pva-103109	Pteropus vampyrus	79.69	0.00e+00	2036.00
IUUC-Pte-104195	Pyrenophora teres	29.39	2.00e-116	414.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	28.91	8.00e-117	415.00
IUUC-Rno-105664	Rattus norvegicus	76.75	0.00e+00	2249.00
IUUC-Sha-107506	Sarcophilus harrisii	84.81	0.00e+00	2200.00
IUUC-Sja-107970	Schizosaccharomyces japonicus	22.57	1.00e-46	182.00
IUUC-Spo-108283	Schizosaccharomyces pombe	23.01	4.00e-54	207.00
IUUC-Sly-111298	Solanum lycopersicum	31.57	1.00e-100	362.00
IUUC-Sar-113052	Sorex araneus	75.84	0.00e+00	2236.00
IUUC-Tgu-116613	Taeniopygia guttata	76.83	0.00e+00	2132.00
IUUC-Tru-118604	Takifugu rubripes	77.17	0.00e+00	1863.00
IUUC-Tni-120779	Tetraodon nigroviridis	76.90	0.00e+00	1838.00
IUUC-Tre-122213	Trichoderma reesei	29.40	3.00e-111	397.00
IUUC-Tvi-122263	Trichoderma virens	29.47	4.00e-107	383.00
IUUC-Tae-125894	Triticum aestivum	42.00	5.00e-95	343.00
IUUC-Ttr-129242	Tursiops truncatus	74.92	0.00e+00	2180.00
IUUC-Vpa-130429	Vicugna pacos	79.76	0.00e+00	983.00
IUUC-Xma-133693	Xiphophorus maculatus	77.28	0.00e+00	1830.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence