iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000008399.2	ENSSTOT00000020969.1	ENSSTOP00000017296.1
ENSSTOG00000008399.2	ENSSTOT00000008431.2	ENSSTOP00000007556.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	2.00e-08	34.3	291	316

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 2    lvCPvCqkm...vdqtdfeeHlDeCl 24
           ++C++Cqk    +++t++e+H+++Cl
   Q: 291  FFCQMCQKNlsaMNVTRREQHVNRCL 316
           89***********************8 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

SVTEAGLVGS LSLSYCGNAL RSVLTPLKTR PKALKLKTGQ MMDESDDDFK ELCANFFQRV 60
KKNGTKEVSG EKKTQKASSS TQIRNKLKKK KQSTTKSKTL LGPAGKKPKL GSEDPSTKKP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGTGACTG AAGCTGGGCT TGTAGGCAGC CTCTCTCTCT CTTACTGTGG AAATGCCCTC 60
AGATCAGTCC TTACTCCCCT GAAGACCCGT CCCAAAGCCT TAAAACTCAA AACTGGTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000210--BTB/POZ_dom
IPR011333--SKP1/BTB/POZ
IPR018574--Structure-sp_endonuc_su_Slx4

PROSITE

PS50097--BTB

Pfam

PF00651--BTB
PF09494--Slx4

SMART

SM00225--BTB

Gene Ontology

GO:0030054--C:cell junction
GO:0005829--C:cytosol
GO:0070522--C:ERCC4-ERCC1 complex
GO:0048476--C:Holliday junction resolvase complex
GO:0000790--C:nuclear chromatin
GO:0000784--C:nuclear chromosome, telomeric region
GO:0005654--C:nucleoplasm
GO:0033557--C:Slx1-Slx4 complex
GO:0048257--F:3'-flap endonuclease activity
GO:0017108--F:5'-flap endonuclease activity
GO:0008821--F:crossover junction endodeoxyribonuclease activity
GO:0008047--F:enzyme activator activity
GO:0010792--P:DNA double-strand break processing involved in repair via single-strand annealing
GO:0006260--P:DNA replication
GO:0000724--P:double-strand break repair via homologous recombination
GO:1904357--P:negative regulation of telomere maintenance via telomere lengthening
GO:0006289--P:nucleotide-excision repair
GO:1904431--P:positive regulation of t-circle formation
GO:0072429--P:response to intra-S DNA damage checkpoint signaling
GO:0090656--P:t-circle formation
GO:0061820--P:telomeric D-loop disassembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001225	Ailuropoda melanoleuca	60.72	0.00e+00	1464.00
IUUC-Apl-003261	Anas platyrhynchos	37.94	1.00e-158	554.00
IUUC-Aca-004455	Anolis carolinensis	62.32	5.00e-21	91.70
IUUC-Acl-008026	Aspergillus clavatus	24.49	1.40e-01	32.00
IUUC-Ame-010993	Astyanax mexicanus	40.54	4.00e-13	67.80
IUUC-Bta-013472	Bos taurus	58.46	0.00e+00	1383.00
IUUC-Cel-018663	Caenorhabditis elegans	40.91	3.00e-03	37.00
IUUC-Cja-019406	Callithrix jacchus	63.97	0.00e+00	1685.00
IUUC-Cfa-020129	Canis familiaris	60.17	0.00e+00	1508.00
IUUC-Cpo-021944	Cavia porcellus	60.46	0.00e+00	1519.00
IUUC-Csa-023941	Chlorocebus sabaeus	61.03	0.00e+00	745.00
IUUC-Cho-024847	Choloepus hoffmanni	69.14	1.00e-165	577.00
IUUC-Cin-025405	Ciona intestinalis	38.46	6.00e-07	48.10
IUUC-Csv-025916	Ciona savignyi	37.29	6.00e-08	50.80
IUUC-Dre-027764	Danio rerio	34.93	3.00e-78	287.00
IUUC-Dno-030083	Dasypus novemcinctus	64.67	0.00e+00	831.00
IUUC-Dor-031129	Dipodomys ordii	56.93	0.00e+00	1249.00
IUUC-Ete-032536	Echinops telfairi	41.64	1.00e-106	381.00
IUUC-Eca-033407	Equus caballus	62.85	0.00e+00	1365.00
IUUC-Eeu-034473	Erinaceus europaeus	44.99	8.00e-52	199.00
IUUC-Fca-035730	Felis catus	57.97	0.00e+00	1441.00
IUUC-Fal-036850	Ficedula albicollis	46.86	1.00e-136	481.00
IUUC-Gmo-038677	Gadus morhua	42.49	8.00e-30	125.00
IUUC-Gga-041088	Gallus gallus	41.92	1.00e-139	491.00
IUUC-Gac-041824	Gasterosteus aculeatus	41.86	9.00e-14	69.70
IUUC-Ggo-045642	Gorilla gorilla	64.31	0.00e+00	1475.00
IUUC-Hsa-047035	Homo sapiens	64.44	0.00e+00	1762.00
IUUC-Hvu-047552	Hordeum vulgare	37.65	3.00e-06	45.40
IUUC-Lch-050364	Latimeria chalumnae	41.94	1.00e-82	301.00
IUUC-Loc-052423	Lepisosteus oculatus	40.32	1.00e-40	162.00
IUUC-Laf-053910	Loxodonta africana	56.72	0.00e+00	1414.00
IUUC-Mcc-055883	Macaca mulatta	66.05	0.00e+00	1768.00
IUUC-Meu-056224	Macropus eugenii	53.28	3.00e-97	350.00
IUUC-Mga-059880	Meleagris gallopavo	44.99	1.00e-137	484.00
IUUC-Mvi-060510	Microbotryum violaceum	38.18	2.00e-04	41.20
IUUC-Mmr-061715	Microcebus murinus	66.61	0.00e+00	1878.00
IUUC-Mdo-062426	Monodelphis domestica	42.55	0.00e+00	741.00
IUUC-Mmu-063947	Mus musculus	61.59	0.00e+00	1594.00
IUUC-Mpu-066184	Mustela putorius furo	59.87	0.00e+00	1532.00
IUUC-Mlu-067533	Myotis lucifugus	61.54	0.00e+00	1475.00
IUUC-Nle-069204	Nomascus leucogenys	64.29	0.00e+00	1733.00
IUUC-Opr-070377	Ochotona princeps	65.97	0.00e+00	924.00
IUUC-Ont-072551	Oreochromis niloticus	34.19	2.00e-63	238.00
IUUC-Oan-073350	Ornithorhynchus anatinus	50.00	8.00e-110	390.00
IUUC-Ocu-074915	Oryctolagus cuniculus	58.80	0.00e+00	1071.00
IUUC-Ola-087360	Oryzias latipes	42.25	7.00e-34	137.00
IUUC-Oga-089106	Otolemur garnettii	60.53	0.00e+00	1323.00
IUUC-Oar-089289	Ovis aries	57.83	0.00e+00	952.00
IUUC-Ptr-091469	Pan troglodytes	64.60	0.00e+00	1747.00
IUUC-Pan-091841	Papio anubis	64.94	0.00e+00	1360.00
IUUC-Psi-093842	Pelodiscus sinensis	47.32	9.00e-135	475.00
IUUC-Pma-094732	Petromyzon marinus	52.11	1.00e-08	52.80
IUUC-Pfo-097299	Poecilia formosa	38.67	5.00e-34	140.00
IUUC-Pab-098271	Pongo abelii	64.86	0.00e+00	1748.00
IUUC-Pca-100721	Procavia capensis	56.92	0.00e+00	834.00
IUUC-Pva-102276	Pteropus vampyrus	64.47	0.00e+00	1660.00
IUUC-Rno-105619	Rattus norvegicus	62.38	0.00e+00	1663.00
IUUC-Sha-106722	Sarcophilus harrisii	43.55	0.00e+00	738.00
IUUC-Sar-113673	Sorex araneus	49.20	4.00e-101	363.00
IUUC-Ssc-115383	Sus scrofa	66.56	0.00e+00	783.00
IUUC-Tgu-117243	Taeniopygia guttata	49.88	6.00e-90	323.00
IUUC-Tru-118092	Takifugu rubripes	42.59	4.00e-32	131.00
IUUC-Tsy-119362	Tarsius syrichta	63.62	0.00e+00	647.00
IUUC-Tni-120380	Tetraodon nigroviridis	78.57	1.00e-20	93.20
IUUC-Tbe-127404	Tupaia belangeri	51.04	0.00e+00	744.00
IUUC-Ttr-128317	Tursiops truncatus	61.66	0.00e+00	1511.00
IUUC-Xtr-132533	Xenopus tropicalis	41.16	5.00e-94	339.00
IUUC-Xma-134059	Xiphophorus maculatus	41.67	2.00e-34	141.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence