iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006353

Ensembl Protein ID

fgenesh1_pg.C_scaffold_7000747

UniProt Accession

D7MA32; D7MA32_ARALL

Genbank Protein ID

EFH43495.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_353574

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pg.C_scaffold_7000747	fgenesh1_pg.C_scaffold_7000747	fgenesh1_pg.C_scaffold_7000747

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-10	41.9	47	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sd..tllvsGsdDgtikvWDlrtgvllk 37
           Ht++vt +      ++   + +++s Dg+i++W++++ +llk
   Q: 47   HTAPVTTVIVdmasNEthSYCWTSSLDGKIRIWEFSEPKLLK 88
           99*****85577963334569*************98887776 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MIRGGRNNIT SAPAFSKDAK KLLLCTANTV SVYRVATGLK ITSLEDHTAP VTTVIVDMAS 60
NETHSYCWTS SLDGKIRIWE FSEPKLLKTF DTHLPIHSLV MIPSHVSHSV IAYVSVEDYS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATTCGCG GCGGAAGAAA CAACATAACT TCCGCTCCGG CGTTTTCGAA AGACGCAAAG 60
AAGCTTCTTC TATGCACAGC CAACACCGTC TCTGTTTACC GCGTCGCCAC TGGCTTAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_353574

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004225	Anas platyrhynchos	23.10	9.00e-37	147.00
IUUC-Ath-006605	Arabidopsis thaliana	90.64	0.00e+00	1396.00
IUUC-Bta-013087	Bos taurus	23.45	3.00e-44	173.00
IUUC-Bol-015084	Brassica oleracea	67.66	0.00e+00	943.00
IUUC-Cpo-022075	Cavia porcellus	23.84	2.00e-45	176.00
IUUC-Dme-031625	Drosophila melanogaster	24.01	4.00e-29	123.00
IUUC-Eeu-034737	Erinaceus europaeus	27.73	2.00e-18	87.00
IUUC-Fal-037083	Ficedula albicollis	23.74	2.00e-40	159.00
IUUC-Mcc-055400	Macaca mulatta	24.01	2.00e-44	173.00
IUUC-Mmr-061240	Microcebus murinus	23.78	3.00e-44	172.00
IUUC-Mdo-062461	Monodelphis domestica	24.14	1.00e-44	174.00
IUUC-Mlu-067113	Myotis lucifugus	23.71	5.00e-36	145.00
IUUC-Opr-070788	Ochotona princeps	24.11	2.00e-34	140.00
IUUC-Oga-087932	Otolemur garnettii	24.02	6.00e-43	168.00
IUUC-Pfo-096805	Poecilia formosa	23.72	2.00e-41	163.00
IUUC-Pva-103237	Pteropus vampyrus	25.48	3.00e-21	96.70
IUUC-Tgu-116868	Taeniopygia guttata	23.70	1.00e-39	157.00
IUUC-Tvi-122323	Trichoderma virens	20.95	9.00e-13	68.90
IUUC-Tbe-127376	Tupaia belangeri	28.64	5.00e-20	92.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence