iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-116461

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01027540

Gene Name

GNB3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000013301.1	ENSTGUT00000013850.1	ENSTGUP00000013693.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-38	128.2	53	88
UBD/Beta-Prp	3.00e-51	174.2	46	266

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH +++++l++ +d +l+vs+s Dg++ vWD+ t +
   Q: 53   GHLAKIYALHWsTDsKLMVSASQDGKLIVWDTYTTN 88
           899*********888****************87765 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee 131
            + r+l gh a+++a+ +s d+k++v++s+D+ + vwd  t   vh++   ++ v+++++ psg++++ G+ d++  ++ l++++   +
   Q: 46   RTRRTLRGHLAKIYALHWSTDSKLMVSASQDGKLIVWDTYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNMCSIYSLKSREGNVK 134
           55689****************************************************************************99987777 PP
   S: 132  ...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
               ls h+g  +c ++ + +n +v++s D+t+ lWd++tg+  + + g ht++  sl+++++ k ++sg++d t klwd+++g+c +t
   Q: 135  vsrELSAHTGYLSCCRFLD-DNNIVTSSGDTTCALWDIETGQQKTVFIG-HTGDCMSLAVSPDFKLFISGACDATAKLWDVREGSCRQT 221
           778***************9.566899**********************9.*************************************** PP
   S: 218  lnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlql 262
           + gh++ ++ + f+pn+e + +gs+D + r++dlr ++ l ++++
   Q: 222  FSGHESDINAISFFPNGEAICTGSDDATCRLFDLRADQELIMYSH 266
           *************************************98888776 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MGEMEQMKQE AEQLKKQIAD ARKACADTTL AQIVSGMEVV GRIQMRTRRT LRGHLAKIYA 60
LHWSTDSKLM VSASQDGKLI VWDTYTTNKV HAIPLRSSWV MTCAYAPSGN FVACGGLDNM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGGAAA TGGAACAGAT GAAGCAGGAG GCTGAGCAGC TGAAGAAGCA GATTGCGGTA 60
ATGCTGGCAA CAGTCATGAA ACTGCTGAAA ACGTGTCTAC TCCCCACTGC ATGCCCAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030425--C:dendrite
GO:0070062--C:extracellular exosome
GO:0007165--P:signal transduction

KEGG

tgu:100228760

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000161	Aegilops tauschii	50.37	5.00e-76	277.00
IUUC-Aml-002370	Ailuropoda melanoleuca	92.35	0.00e+00	668.00
IUUC-Atr-002610	Amborella trichopoda	50.65	6.00e-88	317.00
IUUC-Apl-004079	Anas platyrhynchos	95.88	0.00e+00	686.00
IUUC-Aca-004539	Anolis carolinensis	92.94	0.00e+00	667.00
IUUC-Aly-006025	Arabidopsis lyrata	51.60	4.00e-85	307.00
IUUC-Ath-006617	Arabidopsis thaliana	52.26	6.00e-85	307.00
IUUC-Ang-009836	Aspergillus niger	65.22	2.00e-136	478.00
IUUC-Ate-010520	Aspergillus terreus	59.25	1.00e-107	382.00
IUUC-Bgr-012079	Blumeria graminis	64.50	1.00e-131	462.00
IUUC-Bta-012810	Bos taurus	92.35	0.00e+00	670.00
IUUC-Bci-013621	Botrytis cinerea	65.20	4.00e-131	460.00
IUUC-Bdi-014785	Brachypodium distachyon	50.96	1.00e-87	316.00
IUUC-Bol-015759	Brassica oleracea	52.40	7.00e-83	301.00
IUUC-Bra-017618	Brassica rapa	51.60	9.00e-86	310.00
IUUC-Cja-019894	Callithrix jacchus	92.06	0.00e+00	670.00
IUUC-Cfa-020140	Canis familiaris	92.35	0.00e+00	667.00
IUUC-Cpo-021908	Cavia porcellus	92.65	0.00e+00	671.00
IUUC-Csa-023321	Chlorocebus sabaeus	91.76	0.00e+00	667.00
IUUC-Cgl-026673	Colletotrichum gloeosporioides	64.62	2.00e-133	468.00
IUUC-Cne-026811	Cryptococcus neoformans	64.56	3.00e-136	477.00
IUUC-Dno-029783	Dasypus novemcinctus	90.35	2.00e-175	607.00
IUUC-Ete-032435	Echinops telfairi	85.00	4.00e-173	599.00
IUUC-Eca-034169	Equus caballus	92.35	0.00e+00	669.00
IUUC-Eeu-034631	Erinaceus europaeus	85.71	3.00e-159	553.00
IUUC-Fca-035392	Felis catus	92.35	0.00e+00	671.00
IUUC-Fal-036902	Ficedula albicollis	98.82	0.00e+00	697.00
IUUC-Fox-037946	Fusarium oxysporum	65.10	1.00e-129	455.00
IUUC-Fso-038136	Fusarium solani	65.10	1.00e-129	455.00
IUUC-Gga-040655	Gallus gallus	94.13	0.00e+00	670.00
IUUC-Gma-042671	Glycine max	50.32	5.00e-88	317.00
IUUC-Ggo-045346	Gorilla gorilla	91.76	0.00e+00	667.00
IUUC-Hsa-046203	Homo sapiens	91.76	0.00e+00	667.00
IUUC-Hvu-047596	Hordeum vulgare	50.32	3.00e-86	311.00
IUUC-Itr-048501	Ictidomys tridecemlineatus	92.06	0.00e+00	669.00
IUUC-Kpa-049192	Komagataella pastoris	38.06	3.00e-62	231.00
IUUC-Lpe-051040	Leersia perrieri	50.64	3.00e-88	318.00
IUUC-Loc-052327	Lepisosteus oculatus	86.18	0.00e+00	634.00
IUUC-Laf-053616	Loxodonta africana	91.18	0.00e+00	664.00
IUUC-Mcc-055798	Macaca mulatta	91.76	0.00e+00	667.00
IUUC-Mtr-058752	Medicago truncatula	45.07	7.00e-87	313.00
IUUC-Mga-059516	Meleagris gallopavo	95.88	0.00e+00	684.00
IUUC-Mmr-061701	Microcebus murinus	92.94	0.00e+00	672.00
IUUC-Mdo-061879	Monodelphis domestica	92.35	0.00e+00	667.00
IUUC-Mmu-063132	Mus musculus	92.06	0.00e+00	666.00
IUUC-Mac-064871	Musa acuminata	50.32	2.00e-85	308.00
IUUC-Mpu-066365	Mustela putorius furo	91.76	0.00e+00	669.00
IUUC-Mlu-067628	Myotis lucifugus	91.47	0.00e+00	666.00
IUUC-Ncr-068650	Neurospora crassa	63.16	2.00e-126	444.00
IUUC-Nle-069015	Nomascus leucogenys	90.29	0.00e+00	651.00
IUUC-Opr-070261	Ochotona princeps	92.65	0.00e+00	671.00
IUUC-Ocu-074255	Oryctolagus cuniculus	92.65	0.00e+00	671.00
IUUC-Oba-075818	Oryza barthii	48.92	4.00e-85	307.00
IUUC-Obr-076229	Oryza brachyantha	50.32	2.00e-85	309.00
IUUC-Ogl-077730	Oryza glaberrima	50.96	1.00e-88	319.00
IUUC-Ogu-078583	Oryza glumaepatula	50.38	7.00e-70	256.00
IUUC-Oin-079661	Oryza indica	50.32	2.00e-85	308.00
IUUC-Olo-080225	Oryza longistaminata	50.38	7.00e-70	256.00
IUUC-Oni-082161	Oryza nivara	50.64	4.00e-88	317.00
IUUC-Opu-084072	Oryza punctata	50.96	1.00e-88	319.00
IUUC-Oru-084316	Oryza rufipogon	50.32	2.00e-85	308.00
IUUC-Osa-085380	Oryza sativa	50.32	2.00e-85	308.00
IUUC-Oga-088685	Otolemur garnettii	92.65	0.00e+00	670.00
IUUC-Oar-089373	Ovis aries	90.32	0.00e+00	639.00
IUUC-Ptr-090627	Pan troglodytes	89.41	0.00e+00	647.00
IUUC-Pan-092347	Papio anubis	91.74	0.00e+00	665.00
IUUC-Psi-092965	Pelodiscus sinensis	94.71	0.00e+00	680.00
IUUC-Ppa-095726	Physcomitrella patens	44.51	8.00e-77	280.00
IUUC-Pab-098335	Pongo abelii	91.76	0.00e+00	665.00
IUUC-Pop-099370	Populus trichocarpa	51.29	4.00e-89	321.00
IUUC-Ppe-102016	Prunus persica	44.92	2.00e-86	312.00
IUUC-Pva-102666	Pteropus vampyrus	92.65	0.00e+00	671.00
IUUC-Rno-105834	Rattus norvegicus	92.65	0.00e+00	635.00
IUUC-Sha-107128	Sarcophilus harrisii	92.65	0.00e+00	667.00
IUUC-Sja-107891	Schizosaccharomyces japonicus	35.48	2.00e-57	215.00
IUUC-Spo-108352	Schizosaccharomyces pombe	42.00	7.00e-70	256.00
IUUC-Ssl-108539	Sclerotinia sclerotiorum	65.40	6.00e-131	459.00
IUUC-Smo-109652	Selaginella moellendorffii	45.81	1.00e-75	276.00
IUUC-Sit-110441	Setaria italica	50.64	4.00e-88	317.00
IUUC-Sly-111784	Solanum lycopersicum	50.00	3.00e-85	308.00
IUUC-Stu-112400	Solanum tuberosum	50.00	3.00e-85	308.00
IUUC-Sbi-114038	Sorghum bicolor	50.00	9.00e-87	313.00
IUUC-Sre-115035	Sporisorium reilianum	66.37	2.00e-138	484.00
IUUC-Ssc-115886	Sus scrofa	92.65	0.00e+00	671.00
IUUC-Tca-121224	Theobroma cacao	51.29	1.00e-88	319.00
IUUC-Tre-122156	Trichoderma reesei	64.91	5.00e-134	470.00
IUUC-Tvi-122640	Trichoderma virens	64.91	5.00e-134	470.00
IUUC-Tae-124407	Triticum aestivum	50.64	2.00e-86	312.00
IUUC-Tur-126755	Triticum urartu	50.16	7.00e-87	315.00
IUUC-Tbe-127694	Tupaia belangeri	77.94	7.00e-146	509.00
IUUC-Uma-129589	Ustilago maydis	66.67	2.00e-138	484.00
IUUC-Vda-129855	Verticillium dahliae	68.85	1.00e-127	448.00
IUUC-Vvi-131162	Vitis vinifera	51.29	3.00e-88	318.00
IUUC-Xtr-132928	Xenopus tropicalis	87.35	7.00e-178	615.00
IUUC-Yli-134396	Yarrowia lipolytica	30.81	3.00e-61	228.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence