iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006517

UUCD1 version

UUC-ArL-00995

Ensembl Protein ID

Al_scaffold_0004_3445

UniProt Accession

D7LGM7; D7LGM7_ARALL

Genbank Protein ID

EFH56559.1

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348716

Gene Name

ARALYDRAFT_670726

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0004_3445	Al_scaffold_0004_3445	Al_scaffold_0004_3445

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.90e-29	99.3	317	350
UBD/Beta-Prp	1.60e-44	152.9	228	498

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sdtllvsGsdDgtikvWD 29
           gHt+ vt++af     s   l+s+sdDgt+++WD
   Q: 317  GHTGAVTAIAFsprqaSVYQLLSSSDDGTCRIWD 350
           8**********998743377************** PP

UBD/Beta-Prp

   S: 2    iktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvht 89
           ik+l+gh+ +v +   f +++++++tgs+d+ +k+w+++t  +l+s  ghe+ +t++  s++  + +++s+D +i+vw l +g ++++
   Q: 228  IKKLRGHRNAVYC-AIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISV 314
           5678888887666.999*********************************************************************** PP
   S: 90   lkghedsvlslsfsp...sgdklvsGshdrtirvwdletgqclee........................tlsghdgvvncvvvhpdgn 150
           l+gh+  v++++fsp   s + l+s s+d t r+wd +  q+l                           ++ +++ + c +++ +g 
   Q: 315  LRGHTGAVTAIAFSPrqaSVYQLLSSSDDGTCRIWDARYSQWLPRiyvpspsdastgkstftssntastSNASQSHQILCCAYNANGT 402
           ***************986669***********************************************988999999*********** PP
   S: 151  llvsGslDrtvrlWdl......ktgkllrtl...tgghtdsvyslsfdsng..........................kelvsgsldgt 203
           ++v+Gs D+  r+W+       + ++  ++l   +g h+++v+ ++f+                               +v++s+dg+
   Q: 403  IFVTGSSDSNARVWSAskpnldNAEQPTHELdvlRG-HENDVNYVQFSGCAvapksstadtlkedsypkfknswfchDNIVTCSRDGS 489
           ***************9*****977777777777677.*********766666666688888889999999999***9*********** PP
   S: 204  vklwdlqtg 212
            ++w  ++ 
   Q: 490  AIIWTPRSR 498
           ****87755 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDWIHKSTPF LETSNLANLV QGNVPLAPHE SHSSLTDVDM DLREVYFLIL HFLSTGPCER 60
TFGHLRDEIL EKGLLPRRYH SWWSRSGTCS GRADDDGISL PLSYDNLIER YPHIEKDHLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACTGGA TACACAAATC TACTCCTTTT TTGGAAACTT CGAATTTGGC AAACCTGGTT 60
CAAGGAAATG TTCCTCTTGC GCCACATGAG AGCCATTCTT CGCTAACTGA TGTAGATATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001487--Bromodomain
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50014--BROMODOMAIN_2
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00439--Bromodomain
PF00400--WD40

SMART

SM00297--BROMO
SM00320--WD40

KEGG

aly:ARALYDRAFT_670726

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003700	Anas platyrhynchos	29.62	1.00e-63	238.00
IUUC-Ath-006577	Arabidopsis thaliana	94.02	0.00e+00	2607.00
IUUC-Bta-013217	Bos taurus	31.22	3.00e-76	280.00
IUUC-Bol-016525	Brassica oleracea	84.70	0.00e+00	2462.00
IUUC-Cfa-021037	Canis familiaris	31.52	2.00e-77	284.00
IUUC-Cpo-021934	Cavia porcellus	31.22	5.00e-77	283.00
IUUC-Cin-025702	Ciona intestinalis	35.14	3.00e-29	121.00
IUUC-Dor-030195	Dipodomys ordii	24.59	2.00e-39	157.00
IUUC-Dme-031752	Drosophila melanogaster	27.35	8.00e-70	259.00
IUUC-Ete-032717	Echinops telfairi	30.00	2.00e-38	155.00
IUUC-Eca-034349	Equus caballus	30.98	4.00e-71	263.00
IUUC-Fal-037307	Ficedula albicollis	30.82	6.00e-79	289.00
IUUC-Gga-040865	Gallus gallus	30.69	1.00e-78	288.00
IUUC-Ggo-045500	Gorilla gorilla	31.37	1.00e-76	282.00
IUUC-Hsa-046350	Homo sapiens	31.37	7.00e-77	282.00
IUUC-Hvu-047706	Hordeum vulgare	74.16	1.00e-138	485.00
IUUC-Laf-053848	Loxodonta africana	31.03	9.00e-77	282.00
IUUC-Mcc-054638	Macaca mulatta	31.22	1.00e-76	282.00
IUUC-Mtr-057637	Medicago truncatula	69.87	0.00e+00	1123.00
IUUC-Mga-060165	Meleagris gallopavo	30.51	3.00e-76	280.00
IUUC-Mmr-061227	Microcebus murinus	31.52	2.00e-77	285.00
IUUC-Mdo-062074	Monodelphis domestica	30.92	2.00e-77	284.00
IUUC-Mmu-064075	Mus musculus	31.52	4.00e-77	284.00
IUUC-Nle-069402	Nomascus leucogenys	31.07	2.00e-76	281.00
IUUC-Opr-070971	Ochotona princeps	25.45	4.00e-39	157.00
IUUC-Ont-072221	Oreochromis niloticus	28.71	2.00e-81	297.00
IUUC-Oan-072954	Ornithorhynchus anatinus	31.16	3.00e-80	294.00
IUUC-Ocu-074456	Oryctolagus cuniculus	31.48	1.00e-72	269.00
IUUC-Olu-087745	Ostreococcus lucimarinus	32.64	4.00e-77	283.00
IUUC-Ptr-091213	Pan troglodytes	31.37	8.00e-77	282.00
IUUC-Psi-093271	Pelodiscus sinensis	32.49	5.00e-69	256.00
IUUC-Ppa-095793	Physcomitrella patens	56.76	0.00e+00	848.00
IUUC-Pop-099672	Populus trichocarpa	56.90	0.00e+00	1489.00
IUUC-Ppe-101283	Prunus persica	65.79	0.00e+00	1186.00
IUUC-Rno-105687	Rattus norvegicus	31.37	1.00e-76	282.00
IUUC-Sha-106680	Sarcophilus harrisii	31.17	2.00e-76	281.00
IUUC-Sit-110017	Setaria italica	51.30	0.00e+00	795.00
IUUC-Sly-111348	Solanum lycopersicum	62.14	0.00e+00	1092.00
IUUC-Sbi-114195	Sorghum bicolor	71.43	0.00e+00	814.00
IUUC-Tgu-116513	Taeniopygia guttata	30.93	6.00e-80	293.00
IUUC-Tsy-119003	Tarsius syrichta	29.01	1.00e-62	235.00
IUUC-Tca-121615	Theobroma cacao	71.04	0.00e+00	1193.00
IUUC-Tbe-127663	Tupaia belangeri	34.51	2.00e-30	129.00
IUUC-Ttr-128561	Tursiops truncatus	30.92	2.00e-72	268.00
IUUC-Vvi-131332	Vitis vinifera	58.39	0.00e+00	1625.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence