iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048852

Ensembl Protein ID

ENSSTOP00000008624.2

UniProt Accession

I3MDV9; I3MDV9_ICTTR

Genbank Protein ID

ENSSTOP00000008624

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01094426

Gene Name

LRBA

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000009572.2	ENSSTOT00000009614.2	ENSSTOP00000008624.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-07	28.9	2764	2796

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           d ++++++  d  +l++G+d+g+++vW +++ +
   Q: 2764 DHIRAIQLsRDgQYLLTGGDNGVVMVWQVSDLK 2796
           569999999788***************998766 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

MASEDNRGPS PPPTGDDGGG GGKEETPAEG GALSLKPGLP IRGIRMKFAV LTGLVEVGEV 60
SNRDIVETVF NLLVGGQFDL EMNFIIQEGE SIICMVDLLE KCDITCQAEV WSMFTAILKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTAGTG AAGACAATCG TGGCCCTTCC CCGCCACCAA CAGGTGATGA CGGGGGAGGT 60
GGAGGGAAAG AAGAAACCCC TGCGGAAGGG GGTGCATTGT CTCTGAAGCC AGGGCTCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR010508--DUF1088
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF06469--DUF1088
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0016020--C:membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000339	Aegilops tauschii	39.65	9.00e-146	511.00
IUUC-Atr-002998	Amborella trichopoda	37.95	1.00e-140	496.00
IUUC-Apl-003632	Anas platyrhynchos	83.37	0.00e+00	863.00
IUUC-Aca-005124	Anolis carolinensis	84.53	0.00e+00	2759.00
IUUC-Aly-005407	Arabidopsis lyrata	38.84	9.00e-143	501.00
IUUC-Ath-007674	Arabidopsis thaliana	38.31	3.00e-141	497.00
IUUC-Ame-011487	Astyanax mexicanus	69.21	2.00e-174	604.00
IUUC-Bta-012509	Bos taurus	86.53	0.00e+00	4821.00
IUUC-Bdi-015051	Brachypodium distachyon	38.09	1.00e-142	500.00
IUUC-Bol-015261	Brassica oleracea	38.44	6.00e-138	486.00
IUUC-Bra-016877	Brassica rapa	38.31	3.00e-137	484.00
IUUC-Cja-018744	Callithrix jacchus	95.99	0.00e+00	1524.00
IUUC-Cfa-020786	Canis familiaris	91.50	0.00e+00	5190.00
IUUC-Cpo-021636	Cavia porcellus	89.12	0.00e+00	4959.00
IUUC-Ete-032481	Echinops telfairi	91.32	0.00e+00	1330.00
IUUC-Eca-033893	Equus caballus	90.57	0.00e+00	5111.00
IUUC-Fca-035726	Felis catus	97.17	0.00e+00	1026.00
IUUC-Fal-036871	Ficedula albicollis	79.47	0.00e+00	4490.00
IUUC-Gga-041206	Gallus gallus	78.65	0.00e+00	4558.00
IUUC-Gma-042772	Glycine max	39.08	8.00e-146	513.00
IUUC-Hsa-045763	Homo sapiens	69.85	0.00e+00	758.00
IUUC-Hvu-047134	Hordeum vulgare	38.76	5.00e-146	511.00
IUUC-Lch-050027	Latimeria chalumnae	85.15	0.00e+00	1380.00
IUUC-Lpe-050958	Leersia perrieri	39.19	1.00e-143	504.00
IUUC-Loc-052771	Lepisosteus oculatus	86.80	0.00e+00	1938.00
IUUC-Laf-053724	Loxodonta africana	90.57	0.00e+00	5152.00
IUUC-Mcc-055200	Macaca mulatta	95.72	0.00e+00	1527.00
IUUC-Mtr-058372	Medicago truncatula	37.87	2.00e-138	488.00
IUUC-Mga-059851	Meleagris gallopavo	89.72	0.00e+00	1698.00
IUUC-Mmr-061112	Microcebus murinus	91.92	0.00e+00	5197.00
IUUC-Mdo-062727	Monodelphis domestica	83.14	0.00e+00	4166.00
IUUC-Mmu-064194	Mus musculus	97.85	0.00e+00	1551.00
IUUC-Mac-064991	Musa acuminata	36.41	4.00e-145	510.00
IUUC-Mpu-066074	Mustela putorius furo	91.54	0.00e+00	5178.00
IUUC-Mlu-067308	Myotis lucifugus	87.63	0.00e+00	4851.00
IUUC-Oan-073413	Ornithorhynchus anatinus	93.69	0.00e+00	1498.00
IUUC-Ocu-074483	Oryctolagus cuniculus	92.41	0.00e+00	2412.00
IUUC-Oba-075426	Oryza barthii	40.82	2.00e-144	508.00
IUUC-Obr-076907	Oryza brachyantha	40.33	3.00e-144	507.00
IUUC-Ogl-077620	Oryza glaberrima	36.15	6.00e-138	484.00
IUUC-Ogu-078751	Oryza glumaepatula	41.06	4.00e-146	513.00
IUUC-Oin-079673	Oryza indica	36.23	2.00e-138	488.00
IUUC-Olo-080417	Oryza longistaminata	36.23	6.00e-138	486.00
IUUC-Ome-081931	Oryza meridionalis	40.16	6.00e-145	509.00
IUUC-Oni-082349	Oryza nivara	40.79	1.00e-144	508.00
IUUC-Opu-083624	Oryza punctata	33.71	5.00e-123	437.00
IUUC-Oru-085197	Oryza rufipogon	40.68	3.00e-144	507.00
IUUC-Ola-087242	Oryzias latipes	73.16	0.00e+00	2120.00
IUUC-Olu-087890	Ostreococcus lucimarinus	34.78	4.00e-119	422.00
IUUC-Oga-088409	Otolemur garnettii	94.23	0.00e+00	2835.00
IUUC-Oar-089217	Ovis aries	89.98	0.00e+00	5063.00
IUUC-Ppa-095295	Physcomitrella patens	37.36	5.00e-141	496.00
IUUC-Pop-099604	Populus trichocarpa	37.72	1.00e-140	495.00
IUUC-Pca-100240	Procavia capensis	81.34	0.00e+00	1671.00
IUUC-Ppe-101836	Prunus persica	38.03	1.00e-142	502.00
IUUC-Rno-104971	Rattus norvegicus	97.34	0.00e+00	1635.00
IUUC-Sha-107387	Sarcophilus harrisii	84.61	0.00e+00	4795.00
IUUC-Smo-109504	Selaginella moellendorffii	38.59	3.00e-138	486.00
IUUC-Sit-110075	Setaria italica	39.03	4.00e-141	497.00
IUUC-Sly-111033	Solanum lycopersicum	38.49	3.00e-142	499.00
IUUC-Sbi-113954	Sorghum bicolor	51.12	2.00e-109	390.00
IUUC-Tgu-117304	Taeniopygia guttata	78.58	0.00e+00	4173.00
IUUC-Tru-118226	Takifugu rubripes	72.84	0.00e+00	1188.00
IUUC-Tni-120595	Tetraodon nigroviridis	65.01	0.00e+00	1012.00
IUUC-Tca-121572	Theobroma cacao	38.52	1.00e-145	512.00
IUUC-Tae-124085	Triticum aestivum	37.37	9.00e-121	428.00
IUUC-Tur-126212	Triticum urartu	39.25	8.00e-143	502.00
IUUC-Ttr-128452	Tursiops truncatus	86.34	0.00e+00	3144.00
IUUC-Vvi-130860	Vitis vinifera	39.54	3.00e-143	504.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence