iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132207

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Tripartite motif-containing 55

Genbank Nucleotide ID

AAMC01105384

Gene Name

trim55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000020286.3	ENSXETT00000043769.3	ENSXETP00000043769.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.60e-09	36.3	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f++++++lpC+H  +++C   +            g    s ++frCP Cr
   Q: 26   CPICLEMFSKPVVILPCQHNLCRKCASDIfqasnpylptrGGNTVASGGRFRCPSCR 82
           *************************7444455577799997777779*********8 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MSTSLQYKSF SKEQQTMDNL EKQLICPICL EMFSKPVVIL PCQHNLCRKC ASDIFQASNP 60
YLPTRGGNTV ASGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESTRPERKTD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCACCT CATTGCAGTA CAAGTCATTC TCCAAAGAGC AGCAAACTAT GGATAATCTA 60
GAGAAGCAAC TAATATGTCC AATATGCCTG GAAATGTTCT CCAAACCCGT GGTCATACTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002421	Ailuropoda melanoleuca	63.14	2.00e-179	621.00
IUUC-Apl-003341	Anas platyrhynchos	67.01	1.00e-179	622.00
IUUC-Aca-005384	Anolis carolinensis	81.82	5.00e-160	557.00
IUUC-Ame-010720	Astyanax mexicanus	70.03	1.00e-136	479.00
IUUC-Bta-013040	Bos taurus	63.41	6.00e-178	617.00
IUUC-Cja-019932	Callithrix jacchus	65.22	0.00e+00	628.00
IUUC-Cfa-020450	Canis familiaris	63.71	0.00e+00	642.00
IUUC-Cpo-021767	Cavia porcellus	62.87	2.00e-180	625.00
IUUC-Csa-023600	Chlorocebus sabaeus	63.78	3.00e-180	624.00
IUUC-Cho-024753	Choloepus hoffmanni	78.12	3.00e-157	548.00
IUUC-Cin-025224	Ciona intestinalis	50.16	6.00e-94	337.00
IUUC-Csv-026374	Ciona savignyi	51.60	7.00e-83	300.00
IUUC-Cgl-026521	Colletotrichum gloeosporioides	32.00	5.00e-08	53.50
IUUC-Dre-028701	Danio rerio	69.40	2.00e-135	475.00
IUUC-Dno-030008	Dasypus novemcinctus	64.99	2.00e-178	618.00
IUUC-Dor-031139	Dipodomys ordii	64.13	4.00e-120	424.00
IUUC-Ete-032274	Echinops telfairi	57.62	9.00e-160	556.00
IUUC-Eca-034326	Equus caballus	63.91	1.00e-177	616.00
IUUC-Fca-035385	Felis catus	63.55	2.00e-168	585.00
IUUC-Fal-036679	Ficedula albicollis	84.13	8.00e-165	573.00
IUUC-Gmo-039021	Gadus morhua	63.72	1.00e-120	425.00
IUUC-Gga-040576	Gallus gallus	85.08	1.00e-165	575.00
IUUC-Gac-042165	Gasterosteus aculeatus	68.45	4.00e-134	470.00
IUUC-Ggo-044496	Gorilla gorilla	64.62	0.00e+00	626.00
IUUC-Hsa-046337	Homo sapiens	63.83	0.00e+00	627.00
IUUC-Itr-047912	Ictidomys tridecemlineatus	63.53	2.00e-115	408.00
IUUC-Lch-050504	Latimeria chalumnae	63.35	3.00e-174	604.00
IUUC-Loc-052717	Lepisosteus oculatus	58.64	7.00e-150	523.00
IUUC-Laf-053838	Loxodonta africana	64.57	0.00e+00	647.00
IUUC-Mcc-054690	Macaca mulatta	63.04	4.00e-178	617.00
IUUC-Meu-056782	Macropus eugenii	58.47	1.00e-157	549.00
IUUC-Mga-060112	Meleagris gallopavo	84.54	7.00e-165	573.00
IUUC-Mmr-061229	Microcebus murinus	62.13	6.00e-176	610.00
IUUC-Mdo-062397	Monodelphis domestica	67.01	7.00e-174	603.00
IUUC-Mmu-063764	Mus musculus	63.85	0.00e+00	627.00
IUUC-Mpu-066503	Mustela putorius furo	64.50	0.00e+00	632.00
IUUC-Mlu-067653	Myotis lucifugus	54.18	6.00e-87	313.00
IUUC-Nle-069170	Nomascus leucogenys	64.03	0.00e+00	634.00
IUUC-Ont-072082	Oreochromis niloticus	67.94	5.00e-133	467.00
IUUC-Oan-072715	Ornithorhynchus anatinus	83.71	8.00e-164	570.00
IUUC-Ocu-074747	Oryctolagus cuniculus	63.39	5.00e-175	607.00
IUUC-Ola-086646	Oryzias latipes	62.61	2.00e-126	445.00
IUUC-Oga-087995	Otolemur garnettii	62.08	3.00e-179	621.00
IUUC-Oar-089844	Ovis aries	63.80	8.00e-179	619.00
IUUC-Ptr-091556	Pan troglodytes	64.03	1.00e-180	625.00
IUUC-Pan-092224	Papio anubis	63.44	2.00e-178	618.00
IUUC-Psi-093856	Pelodiscus sinensis	66.60	0.00e+00	644.00
IUUC-Pma-094534	Petromyzon marinus	52.78	5.00e-100	357.00
IUUC-Pfo-096596	Poecilia formosa	61.70	4.00e-129	454.00
IUUC-Pca-100510	Procavia capensis	80.25	9.00e-164	569.00
IUUC-Pva-102962	Pteropus vampyrus	66.31	5.00e-167	580.00
IUUC-Rno-105696	Rattus norvegicus	68.27	4.00e-179	620.00
IUUC-Sha-106825	Sarcophilus harrisii	63.26	1.00e-175	609.00
IUUC-Ssc-116332	Sus scrofa	64.43	4.00e-177	614.00
IUUC-Tgu-117208	Taeniopygia guttata	84.44	7.00e-166	577.00
IUUC-Tru-118744	Takifugu rubripes	66.67	3.00e-132	464.00
IUUC-Tsy-119352	Tarsius syrichta	62.70	0.00e+00	629.00
IUUC-Tni-120413	Tetraodon nigroviridis	67.52	1.00e-130	458.00
IUUC-Tbe-127821	Tupaia belangeri	88.56	1.00e-112	400.00
IUUC-Ttr-128545	Tursiops truncatus	66.46	7.00e-176	610.00
IUUC-Vpa-130699	Vicugna pacos	81.76	8.00e-170	590.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence