iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114197

UUCD1 version

UUC-SoB-01028

Ensembl Protein ID

Sb06g022010.1

UniProt Accession

C5YBW3; C5YBW3_SORBI

Genbank Protein ID

EES11089.1; KXG26679.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765; CM000765

Gene Name

SORBI_006G141000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g022010	Sb06g022010.1	Sb06g022010.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.10e-15	55.8	209	241

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlr 31
           H+ +v+c+a    + ++l++Gs+D  ++vWD+r
   Q: 209  HKMGVCCIAQnaLEgNMLLTGSYDEFLRVWDMR 241
           6667999976774559***************87 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDLGSCYLGG NADAVEFCPH RPFRHVLAAA TYTLQEQERD RAGTISIFSV DAASEDASRR 60
LQLLHTVETA GIFDMKWSPK SPLLAQADAH GRLALRRLEQ EDGSDTDIVF NDVSAEDISS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTTGG GCTCGTGCTA CCTCGGCGGG AACGCCGACG CGGTGGAGTT CTGCCCACAC 60
CGCCCGTTCC GCCACGTGCT GGCCGCCGCC ACCTACACGC TGCAGGAGCA GGAGCGCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_06g022010

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000566	Aegilops tauschii	85.45	4.00e-116	409.00
IUUC-Aml-001799	Ailuropoda melanoleuca	34.12	2.00e-38	152.00
IUUC-Atr-002540	Amborella trichopoda	52.04	8.00e-71	258.00
IUUC-Apl-003582	Anas platyrhynchos	34.03	3.00e-37	148.00
IUUC-Aca-004275	Anolis carolinensis	37.96	9.00e-39	153.00
IUUC-Aly-005425	Arabidopsis lyrata	53.56	5.00e-105	373.00
IUUC-Ath-007434	Arabidopsis thaliana	52.91	9.00e-103	365.00
IUUC-Ago-007782	Ashbya gossypii	31.86	2.00e-21	95.50
IUUC-Ang-009512	Aspergillus niger	25.36	2.00e-12	65.90
IUUC-Ame-011276	Astyanax mexicanus	44.17	9.00e-35	139.00
IUUC-Bta-012985	Bos taurus	32.63	3.00e-37	148.00
IUUC-Bdi-014568	Brachypodium distachyon	80.17	3.00e-161	560.00
IUUC-Bol-016236	Brassica oleracea	53.87	6.00e-107	379.00
IUUC-Bra-017012	Brassica rapa	55.01	2.00e-104	371.00
IUUC-Cel-018435	Caenorhabditis elegans	26.20	1.00e-14	72.80
IUUC-Cja-018952	Callithrix jacchus	32.34	2.00e-35	142.00
IUUC-Cfa-021210	Canis familiaris	34.55	7.00e-39	154.00
IUUC-Cpo-022017	Cavia porcellus	33.94	1.00e-38	153.00
IUUC-Cre-022584	Chlamydomonas reinhardtii	43.28	3.00e-34	137.00
IUUC-Csa-023897	Chlorocebus sabaeus	33.79	5.00e-37	147.00
IUUC-Cho-024708	Choloepus hoffmanni	42.42	8.00e-21	92.80
IUUC-Cin-025485	Ciona intestinalis	36.00	3.00e-54	204.00
IUUC-Cne-026845	Cryptococcus neoformans	31.96	2.00e-43	168.00
IUUC-Cme-027194	Cyanidioschyzon merolae	25.79	7.00e-19	87.00
IUUC-Dre-028581	Danio rerio	34.86	8.00e-39	153.00
IUUC-Dno-029285	Dasypus novemcinctus	33.54	6.00e-42	164.00
IUUC-Dor-030566	Dipodomys ordii	31.91	3.00e-38	151.00
IUUC-Dme-031714	Drosophila melanogaster	33.91	3.00e-46	178.00
IUUC-Ete-032317	Echinops telfairi	29.12	3.00e-27	115.00
IUUC-Eca-033341	Equus caballus	42.42	2.00e-23	100.00
IUUC-Eeu-034890	Erinaceus europaeus	32.93	1.00e-36	146.00
IUUC-Fca-035966	Felis catus	34.13	8.00e-39	154.00
IUUC-Fal-037338	Ficedula albicollis	32.01	1.00e-41	163.00
IUUC-Gmo-039487	Gadus morhua	36.33	3.00e-43	168.00
IUUC-Gga-040691	Gallus gallus	32.42	6.00e-37	147.00
IUUC-Gac-041912	Gasterosteus aculeatus	36.31	3.00e-41	161.00
IUUC-Gma-042905	Glycine max	57.80	4.00e-117	413.00
IUUC-Ggo-045003	Gorilla gorilla	32.83	2.00e-40	159.00
IUUC-Hsa-046840	Homo sapiens	33.13	7.00e-42	164.00
IUUC-Hvu-047291	Hordeum vulgare	82.18	6.00e-175	605.00
IUUC-Itr-048072	Ictidomys tridecemlineatus	30.21	1.00e-34	139.00
IUUC-Kpa-049296	Komagataella pastoris	29.94	5.00e-27	114.00
IUUC-Lch-049627	Latimeria chalumnae	32.26	1.00e-41	163.00
IUUC-Lpe-051462	Leersia perrieri	81.71	8.00e-165	572.00
IUUC-Loc-052917	Lepisosteus oculatus	39.02	5.00e-46	177.00
IUUC-Laf-054268	Loxodonta africana	32.05	1.00e-38	153.00
IUUC-Mcc-055309	Macaca mulatta	32.63	6.00e-41	160.00
IUUC-Meu-055985	Macropus eugenii	34.88	7.00e-38	150.00
IUUC-Mtr-058767	Medicago truncatula	56.07	1.00e-114	405.00
IUUC-Mla-059032	Melampsora laricipopulina	29.76	3.00e-46	178.00
IUUC-Mga-059799	Meleagris gallopavo	38.42	4.00e-34	137.00
IUUC-Mvi-060258	Microbotryum violaceum	29.49	2.00e-35	142.00
IUUC-Mmr-061425	Microcebus murinus	30.54	2.00e-36	145.00
IUUC-Mdo-062620	Monodelphis domestica	34.81	7.00e-43	167.00
IUUC-Mmu-063473	Mus musculus	33.33	6.00e-40	157.00
IUUC-Mac-065376	Musa acuminata	59.31	3.00e-121	427.00
IUUC-Mpu-066124	Mustela putorius furo	34.04	2.00e-40	159.00
IUUC-Mlu-067844	Myotis lucifugus	33.43	6.00e-39	154.00
IUUC-Ont-071523	Oreochromis niloticus	36.34	4.00e-47	181.00
IUUC-Oan-072754	Ornithorhynchus anatinus	35.10	2.00e-31	129.00
IUUC-Ocu-074659	Oryctolagus cuniculus	37.85	2.00e-29	122.00
IUUC-Oba-075786	Oryza barthii	84.75	6.00e-107	379.00
IUUC-Obr-076077	Oryza brachyantha	81.59	4.00e-159	553.00
IUUC-Ogl-077449	Oryza glaberrima	83.00	1.00e-166	577.00
IUUC-Ogu-078217	Oryza glumaepatula	83.00	3.00e-166	577.00
IUUC-Oin-079292	Oryza indica	82.71	3.00e-166	576.00
IUUC-Olo-080599	Oryza longistaminata	83.26	3.00e-112	396.00
IUUC-Ome-081740	Oryza meridionalis	81.40	5.00e-161	559.00
IUUC-Oni-082582	Oryza nivara	83.29	6.00e-167	578.00
IUUC-Opu-083166	Oryza punctata	81.43	3.00e-163	566.00
IUUC-Oru-084514	Oryza rufipogon	81.35	8.00e-152	529.00
IUUC-Osa-086226	Oryza sativa	82.71	3.00e-166	576.00
IUUC-Olu-087798	Ostreococcus lucimarinus	41.57	3.00e-35	140.00
IUUC-Oga-088820	Otolemur garnettii	31.04	3.00e-37	148.00
IUUC-Oar-089825	Ovis aries	30.14	7.00e-29	120.00
IUUC-Pan-091766	Papio anubis	32.63	1.00e-36	146.00
IUUC-Psi-093167	Pelodiscus sinensis	33.43	7.00e-45	174.00
IUUC-Pno-095089	Phaeosphaeria nodorum	24.81	2.00e-15	76.30
IUUC-Ppa-095299	Physcomitrella patens	42.49	4.00e-72	264.00
IUUC-Pfo-096456	Poecilia formosa	39.20	4.00e-49	187.00
IUUC-Pab-097864	Pongo abelii	38.69	3.00e-30	124.00
IUUC-Pop-100043	Populus trichocarpa	58.60	9.00e-87	312.00
IUUC-Ppe-101556	Prunus persica	57.31	1.00e-116	411.00
IUUC-Pva-102281	Pteropus vampyrus	35.26	8.00e-42	163.00
IUUC-Pgr-103459	Puccinia graminis	34.80	4.00e-30	124.00
IUUC-Rno-105659	Rattus norvegicus	32.93	4.00e-39	155.00
IUUC-Sha-107077	Sarcophilus harrisii	34.91	3.00e-41	162.00
IUUC-Smo-109371	Selaginella moellendorffii	45.69	4.00e-76	277.00
IUUC-Sit-109789	Setaria italica	77.33	2.00e-145	507.00
IUUC-Sly-110953	Solanum lycopersicum	61.01	1.00e-80	291.00
IUUC-Stu-112698	Solanum tuberosum	58.40	6.00e-115	406.00
IUUC-Sre-115167	Sporisorium reilianum	33.33	2.00e-27	115.00
IUUC-Tgu-116657	Taeniopygia guttata	38.81	9.00e-34	135.00
IUUC-Tru-118578	Takifugu rubripes	35.91	1.00e-45	176.00
IUUC-Tca-121611	Theobroma cacao	56.73	2.00e-115	407.00
IUUC-Tae-124972	Triticum aestivum	82.13	2.00e-173	600.00
IUUC-Tur-126298	Triticum urartu	83.64	2.00e-114	403.00
IUUC-Ttr-128302	Tursiops truncatus	30.79	5.00e-31	127.00
IUUC-Uma-129644	Ustilago maydis	35.62	2.00e-35	142.00
IUUC-Vvi-131363	Vitis vinifera	56.73	2.00e-107	381.00
IUUC-Xtr-132976	Xenopus tropicalis	33.54	1.00e-39	156.00
IUUC-Xma-133286	Xiphophorus maculatus	37.77	6.00e-48	184.00
IUUC-Yli-134664	Yarrowia lipolytica	28.57	1.00e-26	112.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence