iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076018

Ensembl Protein ID

OB04G30930.1

UniProt Accession

J3M118; J3M118_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB04G30930	OB04G30930.1	OB04G30930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-23	82.4	276	307
E3 adaptor/Cullin RING/APC_C/CDC20	6.00e-125	417.2	141	450

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDl 30
           gH+ +v++l++  s+  l+sG++D+ +++WD+
   Q: 276  GHNQEVCGLKWsgSGQQLASGGNDNLLHIWDV 307
           8**********976699**************8 PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 2    ekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladl.eekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtl.tghs 96
           e+ ldapel dd+ylnLldW+++nvl++aLg+svylw+a+ g+ s+l  + e++  +tsvsw ++g ++a+G +++ v+++D+++++ +rt+   h 
   Q: 141  ERTLDAPELVDDYYLNLLDWGNSNVLSIALGNSVYLWDASIGSTSELVTVdEDDGPITSVSWAPDGRHIAIGLNSSDVQLWDTSSNRLLRTMrGVHD 237
           689***********************************************445557************************************55589 PP
   S: 97   arvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdassse.........Plkkfkehkaavka 184
           +rvg+L+Wn+++l++G+ dg+i+ +dvr++++ ++t+q+h+qevCGlkw+ ++++LasGGnDn +++wd s  +          l++ ++h aavka
   Q: 238  SRVGSLAWNNNILTTGGMDGKIVNNDVRIRNHVVQTYQGHNQEVCGLKWSGSGQQLASGGNDNLLHIWDVSMASsmpsagrtqWLHRLEDHLAAVKA 334
           9********************************************************************98877776666666678999******** PP
   S: 185  iawsPwqkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgea 281
           +aw+P+q++lLasGGG +Drcikfwnt tga+l++idtgsqvcsl+w k+++el+s+hGf++n++tlwkyps+ k+ael+gh++Rvl +a spdg +
   Q: 335  LAWCPFQSNLLASGGGGSDRCIKFWNTHTGACLNSIDTGSQVCSLVWNKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLFMAQSPDGLT 431
           ************************************************************************************************* PP
   S: 282  ivtaagDetlrfwklfdkk 300
           +++aa+Detlrfw++f + 
   Q: 432  VASAAADETLRFWNVFGTP 450
           ****************865 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MDAGSRSISS EKNMRYAAPR PPLQEAGSRP YMPSLSTASR NPSAKCYGDR FIPDRSAMDM 60
DMAHYLLTEP RKDKENAAAS PAKEAYRKLL AEKILNNRTR ILSFRNKPPE PESILTELRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATGCAG GTTCGCGCTC GATCTCATCG GAGAAGAACA TGCGATATGC GGCGCCGCGA 60
CCGCCGCTCC AGGAGGCCGG ATCCAGACCG TACATGCCGT CGCTGAGCAC GGCGTCCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

KEGG

obr:102707393

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000974	Aegilops tauschii	87.58	0.00e+00	835.00
IUUC-Aml-001545	Ailuropoda melanoleuca	45.70	6.00e-104	370.00
IUUC-Atr-002628	Amborella trichopoda	69.12	1.00e-170	591.00
IUUC-Apl-003255	Anas platyrhynchos	48.54	1.00e-109	389.00
IUUC-Aca-004920	Anolis carolinensis	45.39	1.00e-99	355.00
IUUC-Aly-006253	Arabidopsis lyrata	67.86	0.00e+00	652.00
IUUC-Ath-006795	Arabidopsis thaliana	68.29	0.00e+00	654.00
IUUC-Bgr-012059	Blumeria graminis	39.96	3.00e-93	335.00
IUUC-Bta-012625	Bos taurus	47.91	3.00e-105	374.00
IUUC-Bdi-014344	Brachypodium distachyon	88.37	0.00e+00	868.00
IUUC-Bol-015368	Brassica oleracea	71.52	0.00e+00	659.00
IUUC-Bra-016738	Brassica rapa	70.55	0.00e+00	652.00
IUUC-Cja-019132	Callithrix jacchus	46.83	4.00e-107	380.00
IUUC-Cfa-020780	Canis familiaris	47.06	3.00e-106	377.00
IUUC-Cpo-022223	Cavia porcellus	46.15	2.00e-95	342.00
IUUC-Cre-022701	Chlamydomonas reinhardtii	50.59	8.00e-114	402.00
IUUC-Csa-023666	Chlorocebus sabaeus	46.61	6.00e-106	377.00
IUUC-Cho-024920	Choloepus hoffmanni	63.96	2.00e-42	165.00
IUUC-Cin-025675	Ciona intestinalis	47.06	3.00e-108	384.00
IUUC-Csv-026019	Ciona savignyi	46.10	8.00e-99	353.00
IUUC-Cne-026872	Cryptococcus neoformans	38.78	1.00e-88	319.00
IUUC-Cme-027234	Cyanidioschyzon merolae	46.14	6.00e-100	357.00
IUUC-Dre-028026	Danio rerio	44.32	9.00e-102	362.00
IUUC-Dno-028865	Dasypus novemcinctus	45.97	1.00e-102	365.00
IUUC-Dor-030958	Dipodomys ordii	46.96	2.00e-99	355.00
IUUC-Dse-031391	Dothistroma septosporum	48.12	9.00e-95	340.00
IUUC-Dme-031905	Drosophila melanogaster	48.05	5.00e-112	397.00
IUUC-Ete-032387	Echinops telfairi	43.21	1.00e-95	342.00
IUUC-Eeu-035059	Erinaceus europaeus	42.30	2.00e-86	312.00
IUUC-Fca-036346	Felis catus	44.88	2.00e-92	332.00
IUUC-Fal-037558	Ficedula albicollis	48.05	3.00e-108	384.00
IUUC-Gmo-039284	Gadus morhua	44.89	2.00e-102	365.00
IUUC-Gga-040790	Gallus gallus	46.38	7.00e-109	386.00
IUUC-Gac-041431	Gasterosteus aculeatus	44.39	3.00e-94	338.00
IUUC-Gma-043985	Glycine max	70.76	0.00e+00	630.00
IUUC-Ggo-045052	Gorilla gorilla	46.83	4.00e-106	377.00
IUUC-Hsa-046305	Homo sapiens	46.83	4.00e-106	377.00
IUUC-Hvu-047565	Hordeum vulgare	87.17	0.00e+00	830.00
IUUC-Itr-048461	Ictidomys tridecemlineatus	46.07	3.00e-95	341.00
IUUC-Lpe-050954	Leersia perrieri	89.41	0.00e+00	826.00
IUUC-Loc-052638	Lepisosteus oculatus	44.26	6.00e-90	323.00
IUUC-Lma-052998	Leptosphaeria maculans	46.51	4.00e-94	337.00
IUUC-Laf-053742	Loxodonta africana	45.80	5.00e-105	373.00
IUUC-Mcc-054948	Macaca mulatta	46.61	6.00e-106	377.00
IUUC-Mtr-057725	Medicago truncatula	73.80	3.00e-180	623.00
IUUC-Mga-060102	Meleagris gallopavo	46.38	1.00e-108	385.00
IUUC-Mmr-061615	Microcebus murinus	46.61	6.00e-106	377.00
IUUC-Mmu-063864	Mus musculus	45.62	7.00e-99	353.00
IUUC-Mac-064861	Musa acuminata	81.82	0.00e+00	776.00
IUUC-Mpu-066502	Mustela putorius furo	47.67	1.00e-107	382.00
IUUC-Mlu-067277	Myotis lucifugus	47.58	2.00e-103	369.00
IUUC-Nle-070149	Nomascus leucogenys	46.38	4.00e-104	370.00
IUUC-Ont-071660	Oreochromis niloticus	44.27	3.00e-94	338.00
IUUC-Oan-073677	Ornithorhynchus anatinus	52.68	3.00e-96	344.00
IUUC-Ocu-073797	Oryctolagus cuniculus	47.93	5.00e-106	377.00
IUUC-Oba-075946	Oryza barthii	96.20	0.00e+00	952.00
IUUC-Ogl-077146	Oryza glaberrima	90.48	0.00e+00	936.00
IUUC-Ogu-078562	Oryza glumaepatula	89.41	0.00e+00	838.00
IUUC-Oin-079145	Oryza indica	95.99	0.00e+00	949.00
IUUC-Olo-080449	Oryza longistaminata	89.41	0.00e+00	850.00
IUUC-Ome-081186	Oryza meridionalis	96.13	0.00e+00	938.00
IUUC-Oni-082540	Oryza nivara	95.78	0.00e+00	947.00
IUUC-Opu-083901	Oryza punctata	95.15	0.00e+00	944.00
IUUC-Oru-084357	Oryza rufipogon	89.41	0.00e+00	838.00
IUUC-Osa-085566	Oryza sativa	90.28	0.00e+00	934.00
IUUC-Ola-086907	Oryzias latipes	46.42	2.00e-95	342.00
IUUC-Olu-087647	Ostreococcus lucimarinus	58.06	7.00e-138	482.00
IUUC-Oga-088184	Otolemur garnettii	46.99	7.00e-102	363.00
IUUC-Oar-090023	Ovis aries	47.79	1.00e-102	365.00
IUUC-Ptr-090935	Pan troglodytes	46.15	4.00e-105	374.00
IUUC-Pan-091845	Papio anubis	46.61	6.00e-106	377.00
IUUC-Psi-093188	Pelodiscus sinensis	47.80	9.00e-108	382.00
IUUC-Pma-094187	Petromyzon marinus	45.76	2.00e-99	354.00
IUUC-Pno-094809	Phaeosphaeria nodorum	46.35	3.00e-95	341.00
IUUC-Ppa-095687	Physcomitrella patens	65.11	1.00e-154	538.00
IUUC-Pab-098603	Pongo abelii	46.61	6.00e-106	377.00
IUUC-Pop-098890	Populus trichocarpa	72.16	0.00e+00	644.00
IUUC-Pca-101062	Procavia capensis	46.76	2.00e-106	378.00
IUUC-Ppe-101865	Prunus persica	75.85	3.00e-178	617.00
IUUC-Pva-102925	Pteropus vampyrus	48.54	2.00e-106	378.00
IUUC-Pte-104142	Pyrenophora teres	44.83	7.00e-96	343.00
IUUC-Pyt-104693	Pyrenophora triticirepentis	44.83	9.00e-96	343.00
IUUC-Rno-106005	Rattus norvegicus	45.62	3.00e-99	354.00
IUUC-Sha-107472	Sarcophilus harrisii	47.09	4.00e-101	360.00
IUUC-Sja-107919	Schizosaccharomyces japonicus	45.41	1.00e-90	326.00
IUUC-Spo-108075	Schizosaccharomyces pombe	44.20	2.00e-90	325.00
IUUC-Smo-108922	Selaginella moellendorffii	59.69	1.00e-154	538.00
IUUC-Sit-110032	Setaria italica	89.29	0.00e+00	856.00
IUUC-Sly-111202	Solanum lycopersicum	74.28	0.00e+00	670.00
IUUC-Stu-112024	Solanum tuberosum	74.03	0.00e+00	681.00
IUUC-Sar-113092	Sorex araneus	44.47	2.00e-93	335.00
IUUC-Sbi-114558	Sorghum bicolor	89.01	0.00e+00	860.00
IUUC-Ssc-115710	Sus scrofa	47.91	2.00e-105	375.00
IUUC-Tgu-117100	Taeniopygia guttata	48.29	6.00e-109	386.00
IUUC-Tni-120474	Tetraodon nigroviridis	45.85	3.00e-95	341.00
IUUC-Tca-120949	Theobroma cacao	72.89	0.00e+00	671.00
IUUC-Tae-123918	Triticum aestivum	86.82	0.00e+00	853.00
IUUC-Tur-126193	Triticum urartu	87.77	0.00e+00	840.00
IUUC-Tbe-127384	Tupaia belangeri	50.51	2.00e-85	308.00
IUUC-Ttr-128511	Tursiops truncatus	46.64	3.00e-105	374.00
IUUC-Vvi-131245	Vitis vinifera	79.16	0.00e+00	629.00
IUUC-Xtr-131993	Xenopus tropicalis	48.29	6.00e-108	383.00
IUUC-Xma-133332	Xiphophorus maculatus	46.06	9.00e-100	356.00
IUUC-Zma-135456	Zea mays	85.59	0.00e+00	844.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence