iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095228

Ensembl Protein ID

PP1S229_66V6.1

UniProt Accession

A9TH66; A9TH66_PHYPA

Genbank Protein ID

EDQ57256.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545118

Gene Name

PHYPADRAFT_145534

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S229_66V6	PP1S229_66V6.1	PP1S229_66V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-18	66.6	283	312

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWD 29
           H+++v+ l++  ++ +l++++ Dgt+++W 
   Q: 283  HNGEVSHLDWdmTGMTLATSGSDGTVRLWQ 312
           9*********8766669************5 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MASNSTSSIL PLLTLPDDVT HTAWNSSSSR LALASHSGTL HVWAYPPSVH SPATSWQAHD 60
APILKVVWAP PEFGHLLATC ATDGSVSLWE EISSKDAGIE WRLVCQFPEN QTPVLDFVFG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCACTGGG GCTTCGTGCC TGTGGAGAGG GAGAGTGGGA GGAAGCTCCT TGTCTCCTCG 60
GCCTCAGCTG GCCCTGTGGT GTTCTCTCCA CGATGCATTT GCTGTAACTC TACTGCATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005635--C:nuclear envelope

KEGG

ppp:PHYPADRAFT_145534

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001926	Ailuropoda melanoleuca	32.87	2.00e-33	136.00
IUUC-Atr-003124	Amborella trichopoda	49.50	2.00e-56	210.00
IUUC-Apl-003654	Anas platyrhynchos	32.87	3.00e-33	135.00
IUUC-Aca-004378	Anolis carolinensis	32.75	9.00e-34	136.00
IUUC-Aly-005963	Arabidopsis lyrata	42.75	1.00e-67	248.00
IUUC-Ath-007107	Arabidopsis thaliana	40.94	1.00e-69	255.00
IUUC-Bdi-014594	Brachypodium distachyon	43.42	9.00e-71	259.00
IUUC-Bol-016565	Brassica oleracea	43.87	1.00e-69	256.00
IUUC-Bra-017831	Brassica rapa	44.24	2.00e-70	258.00
IUUC-Cja-018849	Callithrix jacchus	32.40	7.00e-33	134.00
IUUC-Csa-023900	Chlorocebus sabaeus	32.52	3.00e-33	135.00
IUUC-Cho-024660	Choloepus hoffmanni	32.17	1.00e-32	133.00
IUUC-Dre-028068	Danio rerio	32.28	4.00e-36	144.00
IUUC-Eca-033425	Equus caballus	32.87	8.00e-34	136.00
IUUC-Fca-036520	Felis catus	32.52	3.00e-33	135.00
IUUC-Fal-037234	Ficedula albicollis	32.87	2.00e-32	134.00
IUUC-Gga-041059	Gallus gallus	32.87	3.00e-33	135.00
IUUC-Gac-041337	Gasterosteus aculeatus	31.82	2.00e-33	135.00
IUUC-Gma-044300	Glycine max	43.17	9.00e-71	259.00
IUUC-Ggo-044944	Gorilla gorilla	32.52	3.00e-33	135.00
IUUC-Hsa-046038	Homo sapiens	32.52	3.00e-33	135.00
IUUC-Hvu-047455	Hordeum vulgare	44.74	3.00e-74	271.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	32.52	2.00e-33	135.00
IUUC-Lch-050466	Latimeria chalumnae	32.04	1.00e-31	130.00
IUUC-Lpe-051064	Leersia perrieri	44.44	2.00e-74	271.00
IUUC-Loc-052773	Lepisosteus oculatus	29.63	1.00e-29	123.00
IUUC-Meu-055958	Macropus eugenii	29.02	7.00e-21	94.00
IUUC-Mtr-057876	Medicago truncatula	41.96	9.00e-67	246.00
IUUC-Mla-058820	Melampsora laricipopulina	25.09	2.00e-19	89.00
IUUC-Mga-059348	Meleagris gallopavo	32.87	1.00e-33	135.00
IUUC-Mdo-061806	Monodelphis domestica	33.22	3.00e-34	138.00
IUUC-Mmu-064328	Mus musculus	32.39	3.00e-37	148.00
IUUC-Mac-064960	Musa acuminata	46.92	1.00e-67	249.00
IUUC-Mpu-066873	Mustela putorius furo	32.52	4.00e-33	135.00
IUUC-Nle-068977	Nomascus leucogenys	32.52	2.00e-33	135.00
IUUC-Ont-072644	Oreochromis niloticus	31.47	8.00e-33	133.00
IUUC-Oan-073098	Ornithorhynchus anatinus	32.52	3.00e-33	134.00
IUUC-Ocu-073911	Oryctolagus cuniculus	32.52	3.00e-33	135.00
IUUC-Oba-075325	Oryza barthii	43.33	1.00e-63	235.00
IUUC-Obr-076089	Oryza brachyantha	45.82	2.00e-72	265.00
IUUC-Ogl-077279	Oryza glaberrima	45.93	5.00e-71	260.00
IUUC-Ogu-078901	Oryza glumaepatula	43.33	8.00e-64	236.00
IUUC-Oin-079385	Oryza indica	45.52	2.00e-69	255.00
IUUC-Ome-081809	Oryza meridionalis	45.56	6.00e-71	261.00
IUUC-Oni-082185	Oryza nivara	41.48	8.00e-61	226.00
IUUC-Opu-083324	Oryza punctata	42.43	1.00e-67	249.00
IUUC-Oru-084801	Oryza rufipogon	45.93	1.00e-71	262.00
IUUC-Osa-085790	Oryza sativa	45.93	5.00e-71	260.00
IUUC-Olu-087855	Ostreococcus lucimarinus	22.91	1.00e-14	73.20
IUUC-Oga-088798	Otolemur garnettii	32.52	2.00e-33	135.00
IUUC-Oar-090298	Ovis aries	32.52	1.00e-31	133.00
IUUC-Ptr-091074	Pan troglodytes	32.52	2.00e-33	135.00
IUUC-Psi-093508	Pelodiscus sinensis	32.87	4.00e-33	134.00
IUUC-Pfo-096384	Poecilia formosa	31.82	4.00e-33	134.00
IUUC-Pab-098629	Pongo abelii	32.52	2.00e-33	135.00
IUUC-Pop-099015	Populus trichocarpa	43.91	1.00e-70	259.00
IUUC-Ppe-101303	Prunus persica	44.06	6.00e-73	266.00
IUUC-Rno-104895	Rattus norvegicus	32.04	7.00e-36	146.00
IUUC-Sha-106829	Sarcophilus harrisii	33.22	5.00e-34	137.00
IUUC-Smo-109282	Selaginella moellendorffii	47.52	1.00e-77	281.00
IUUC-Sit-110393	Setaria italica	43.75	1.00e-70	259.00
IUUC-Sly-111125	Solanum lycopersicum	42.45	3.00e-70	257.00
IUUC-Stu-112745	Solanum tuberosum	37.36	3.00e-66	244.00
IUUC-Sar-113279	Sorex araneus	32.17	8.00e-33	133.00
IUUC-Sbi-114110	Sorghum bicolor	42.76	4.00e-71	260.00
IUUC-Ssc-115589	Sus scrofa	31.58	1.00e-32	132.00
IUUC-Tgu-117523	Taeniopygia guttata	32.87	2.00e-33	135.00
IUUC-Tru-117985	Takifugu rubripes	31.58	1.00e-31	132.00
IUUC-Tsy-118913	Tarsius syrichta	31.56	3.00e-28	118.00
IUUC-Tni-120670	Tetraodon nigroviridis	31.82	3.00e-33	135.00
IUUC-Tca-120999	Theobroma cacao	38.69	2.00e-57	216.00
IUUC-Tae-123587	Triticum aestivum	44.74	2.00e-73	268.00
IUUC-Tur-126582	Triticum urartu	44.29	1.00e-67	249.00
IUUC-Tbe-127344	Tupaia belangeri	27.68	3.00e-19	89.00
IUUC-Ttr-128347	Tursiops truncatus	32.52	4.00e-33	134.00
IUUC-Vpa-130656	Vicugna pacos	32.52	6.00e-33	134.00
IUUC-Vvi-131103	Vitis vinifera	43.08	3.00e-72	264.00
IUUC-Xtr-132736	Xenopus tropicalis	32.87	6.00e-34	137.00
IUUC-Yli-134659	Yarrowia lipolytica	32.26	4.00e-38	151.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence