iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111850

Ensembl Protein ID

Solyc06g034330.2.1

UniProt Accession

K4C4Q4; K4C4Q4_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g034330.2	Solyc06g034330.2.1	Solyc06g034330.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.10e-08	34.4	338	379
UBD/Alpha-Helix/CUE	2.60e-07	31.3	544	581

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           CaiC+e++ +  + l+C+H+fh+ Cl  w  l +    + +CP+C
   Q: 338  CAICREPMAK-AKKLSCNHLFHLACLRSW--LDQGLTENYSCPTC 379
           ********99.999***************..788899******** PP

UBD/Alpha-Helix/CUE

   S: 3    etaleqLkeiFPnldysviqvvLeantgsleaavnnLLe 41
           +t++e+++e++P+ ++++i  +L ++t s++ +vnnLL 
   Q: 544  HTMVETVREVLPHIPDEIIFEDL-QRTHSVTVTVNNLLH 581
           8**********************.*************96 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGVTYLSVSA FCTVLSYVGL QCWMGISVEK LKSDGLIGES IINFRNGSRA LENLLGSHTT 60
IALGANFAVN VFILLVLFLK TIFFGDLHSS EIRKLAERLI NYIISKGTFL PLVVPPTLYQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTTTTTTGC TTTAAGTTCC ACTACCATTC AGAATTAGGT GGACTGGTTG CGGTATACTA 60
AGTTGCAGCC ACCAATTTTG AGGGCAAATG ATCATGCTTA ATTGTTCTGA TGAAAGTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003892--CUE
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51140--CUE
PS50089--ZF_RING_2

Pfam

PF02845--CUE
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000658	Aegilops tauschii	36.62	7.00e-24	102.00
IUUC-Atr-003008	Amborella trichopoda	55.24	2.00e-172	598.00
IUUC-Aly-006287	Arabidopsis lyrata	62.76	0.00e+00	707.00
IUUC-Ath-006950	Arabidopsis thaliana	63.44	0.00e+00	701.00
IUUC-Bdi-014169	Brachypodium distachyon	52.46	4.00e-122	431.00
IUUC-Bol-015123	Brassica oleracea	62.59	0.00e+00	691.00
IUUC-Bra-017662	Brassica rapa	61.73	1.00e-175	608.00
IUUC-Fal-036758	Ficedula albicollis	26.27	1.00e-35	143.00
IUUC-Gma-043393	Glycine max	64.63	0.00e+00	736.00
IUUC-Lpe-051410	Leersia perrieri	54.90	6.00e-68	249.00
IUUC-Mtr-058643	Medicago truncatula	65.25	0.00e+00	737.00
IUUC-Mac-065495	Musa acuminata	54.95	6.00e-152	530.00
IUUC-Oba-074987	Oryza barthii	42.25	2.00e-85	308.00
IUUC-Obr-076485	Oryza brachyantha	52.94	3.00e-123	434.00
IUUC-Ogu-078481	Oryza glumaepatula	40.35	2.00e-88	318.00
IUUC-Oin-079556	Oryza indica	51.49	2.00e-109	389.00
IUUC-Olo-080588	Oryza longistaminata	55.64	8.00e-40	155.00
IUUC-Ome-081941	Oryza meridionalis	44.28	5.00e-100	357.00
IUUC-Oni-082488	Oryza nivara	40.41	8.00e-86	310.00
IUUC-Opu-083500	Oryza punctata	47.38	4.00e-102	364.00
IUUC-Oru-085082	Oryza rufipogon	42.25	2.00e-85	308.00
IUUC-Osa-085509	Oryza sativa	52.91	5.00e-132	463.00
IUUC-Ppa-095969	Physcomitrella patens	47.48	5.00e-118	417.00
IUUC-Pop-099576	Populus trichocarpa	64.97	0.00e+00	692.00
IUUC-Ppe-102033	Prunus persica	67.52	0.00e+00	753.00
IUUC-Smo-109664	Selaginella moellendorffii	45.10	5.00e-108	384.00
IUUC-Sit-110161	Setaria italica	52.59	5.00e-132	464.00
IUUC-Sbi-113957	Sorghum bicolor	53.99	3.00e-137	481.00
IUUC-Tca-121783	Theobroma cacao	68.37	0.00e+00	774.00
IUUC-Tae-125510	Triticum aestivum	49.80	1.00e-103	369.00
IUUC-Vvi-130989	Vitis vinifera	69.90	0.00e+00	793.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence