iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129844

Ensembl Protein ID

EGY14253

UniProt Accession

G2X5B2; G2X5B2_VERDV

Genbank Protein ID

EGY14253.1

Protein Name

Protein HIR

Genbank Nucleotide ID

DS572704

Gene Name

VDAG_05417

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_05417	EGY14253	EGY14253

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-24	83.4	70	106

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H + ++++++ ++ ++l+sG+dD+ i v+ l++++++
   Q: 70   HLGTIHSVRWsPNgRYLASGADDKLICVYHLDKNPPV 106
           8999*******777***************99877765 PP

Organism

Verticillium dahliae

Functional Description
(View)

Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle.

Protein Sequence
(Fasta)

MHVIKPAWLS HSGEQKDYEV YSCHVSPDGK RLATAGGDGH VRIWSTEAIY GTNSDDNVGK 60
PRQLCHMSHH LGTIHSVRWS PNGRYLASGA DDKLICVYHL DKNPPVASFG TGDVPPVENW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCACGTCA TTAAGCCAGC CTGGCTGAGC CATAGCGGCG AGCAGAAGGA CTACGAAGTC 60
TACAGCTGCC ACGTCTCCCC CGACGGAAAG CGGCTCGCGA CAGCTGGAGG CGATGGTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0156--Chromatin regulator
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR031120--HIR1
IPR011494--Hira
IPR019015--HIRA_B_motif
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF07569--Hira
PF09453--HIRA_B
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0016569--P:covalent chromatin modification
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

vda:VDAG_05417

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001039	Aegilops tauschii	30.95	3.00e-63	235.00
IUUC-Aml-001723	Ailuropoda melanoleuca	33.93	1.00e-59	223.00
IUUC-Atr-003132	Amborella trichopoda	33.80	4.00e-65	241.00
IUUC-Apl-003197	Anas platyrhynchos	34.62	4.00e-60	224.00
IUUC-Aca-004733	Anolis carolinensis	33.62	1.00e-65	243.00
IUUC-Aly-005446	Arabidopsis lyrata	32.14	2.00e-65	242.00
IUUC-Ath-007627	Arabidopsis thaliana	33.49	3.00e-68	251.00
IUUC-Ago-007766	Ashbya gossypii	37.66	2.00e-115	408.00
IUUC-Acl-008104	Aspergillus clavatus	52.89	0.00e+00	1070.00
IUUC-Afl-008591	Aspergillus flavus	51.78	0.00e+00	1042.00
IUUC-Afu-008781	Aspergillus fumigatus	51.78	0.00e+00	1010.00
IUUC-Ani-009272	Aspergillus nidulans	49.67	0.00e+00	939.00
IUUC-Ang-009655	Aspergillus niger	52.04	0.00e+00	1056.00
IUUC-Aor-010119	Aspergillus oryzae	51.21	0.00e+00	1041.00
IUUC-Ate-010530	Aspergillus terreus	49.63	0.00e+00	964.00
IUUC-Bgr-012237	Blumeria graminis	57.04	0.00e+00	1109.00
IUUC-Bta-013320	Bos taurus	30.24	6.00e-60	224.00
IUUC-Bci-013795	Botrytis cinerea	58.91	0.00e+00	1229.00
IUUC-Bdi-014075	Brachypodium distachyon	32.87	1.00e-67	249.00
IUUC-Bol-016440	Brassica oleracea	34.59	2.00e-68	252.00
IUUC-Bra-016651	Brassica rapa	34.14	4.00e-67	248.00
IUUC-Cel-018692	Caenorhabditis elegans	24.88	3.00e-33	135.00
IUUC-Cja-018987	Callithrix jacchus	35.51	5.00e-55	207.00
IUUC-Cfa-020132	Canis familiaris	33.93	1.00e-59	223.00
IUUC-Cpo-021484	Cavia porcellus	33.82	2.00e-63	235.00
IUUC-Cre-022846	Chlamydomonas reinhardtii	31.14	1.00e-56	213.00
IUUC-Csa-023081	Chlorocebus sabaeus	33.82	2.00e-63	235.00
IUUC-Cin-025182	Ciona intestinalis	32.76	5.00e-60	224.00
IUUC-Csv-026154	Ciona savignyi	33.08	2.00e-58	218.00
IUUC-Cgl-026655	Colletotrichum gloeosporioides	74.57	0.00e+00	1523.00
IUUC-Cne-026891	Cryptococcus neoformans	40.82	2.00e-87	315.00
IUUC-Cme-027349	Cyanidioschyzon merolae	26.62	2.00e-31	129.00
IUUC-Dre-027655	Danio rerio	26.05	8.00e-64	237.00
IUUC-Dno-029557	Dasypus novemcinctus	34.01	8.00e-50	190.00
IUUC-Dor-030687	Dipodomys ordii	29.63	2.00e-48	186.00
IUUC-Dse-031334	Dothistroma septosporum	54.70	0.00e+00	791.00
IUUC-Dme-031746	Drosophila melanogaster	34.83	2.00e-65	242.00
IUUC-Ete-032384	Echinops telfairi	28.02	2.00e-40	159.00
IUUC-Eca-033430	Equus caballus	33.68	2.00e-59	222.00
IUUC-Fca-036121	Felis catus	33.58	4.00e-60	224.00
IUUC-Fal-036817	Ficedula albicollis	34.62	7.00e-60	224.00
IUUC-Fox-037906	Fusarium oxysporum	76.13	0.00e+00	1004.00
IUUC-Fso-038409	Fusarium solani	69.75	0.00e+00	1445.00
IUUC-Gmo-039151	Gadus morhua	33.93	5.00e-65	241.00
IUUC-Ggr-040016	Gaeumannomyces graminis	67.30	0.00e+00	1372.00
IUUC-Gga-040936	Gallus gallus	34.47	1.00e-63	236.00
IUUC-Gac-041405	Gasterosteus aculeatus	33.25	9.00e-60	223.00
IUUC-Gma-042800	Glycine max	33.18	6.00e-67	247.00
IUUC-Ggo-045430	Gorilla gorilla	33.82	2.00e-63	235.00
IUUC-Hsa-046442	Homo sapiens	33.82	2.00e-63	236.00
IUUC-Hvu-047587	Hordeum vulgare	32.11	1.00e-56	213.00
IUUC-Itr-048910	Ictidomys tridecemlineatus	36.53	1.00e-46	177.00
IUUC-Kpa-049145	Komagataella pastoris	45.66	1.00e-116	412.00
IUUC-Lch-050474	Latimeria chalumnae	34.25	3.00e-63	235.00
IUUC-Lpe-051209	Leersia perrieri	32.24	1.00e-60	226.00
IUUC-Loc-052119	Lepisosteus oculatus	32.73	1.00e-64	239.00
IUUC-Lma-053237	Leptosphaeria maculans	51.77	0.00e+00	1009.00
IUUC-Laf-053718	Loxodonta africana	33.82	2.00e-63	235.00
IUUC-Mcc-055621	Macaca mulatta	35.04	6.00e-55	207.00
IUUC-Meu-055914	Macropus eugenii	33.80	8.00e-43	167.00
IUUC-Mor-057090	Magnaporthe oryzae	66.85	0.00e+00	1365.00
IUUC-Mpo-057364	Magnaporthe poae	66.54	0.00e+00	1368.00
IUUC-Mtr-058691	Medicago truncatula	33.65	3.00e-66	245.00
IUUC-Mla-058914	Melampsora laricipopulina	40.58	7.00e-78	283.00
IUUC-Mga-060181	Meleagris gallopavo	34.62	5.00e-60	224.00
IUUC-Mvi-060432	Microbotryum violaceum	34.67	7.00e-68	250.00
IUUC-Mmr-060871	Microcebus murinus	33.82	2.00e-63	235.00
IUUC-Mdo-062301	Monodelphis domestica	34.23	9.00e-63	233.00
IUUC-Mmu-063888	Mus musculus	34.23	2.00e-63	236.00
IUUC-Mac-065137	Musa acuminata	33.76	4.00e-65	241.00
IUUC-Mpu-066732	Mustela putorius furo	33.93	1.00e-59	223.00
IUUC-Mlu-067542	Myotis lucifugus	33.93	2.00e-59	222.00
IUUC-Nfi-068396	Neosartorya fischeri	52.07	0.00e+00	1013.00
IUUC-Ncr-068842	Neurospora crassa	67.77	0.00e+00	1409.00
IUUC-Nle-070156	Nomascus leucogenys	33.82	2.00e-63	235.00
IUUC-Opr-070808	Ochotona princeps	32.84	6.00e-37	147.00
IUUC-Ont-072105	Oreochromis niloticus	30.58	1.00e-63	236.00
IUUC-Ocu-074962	Oryctolagus cuniculus	33.93	8.00e-60	223.00
IUUC-Oba-075178	Oryza barthii	34.12	3.00e-68	251.00
IUUC-Obr-076399	Oryza brachyantha	33.89	2.00e-69	256.00
IUUC-Ogu-078797	Oryza glumaepatula	34.12	3.00e-68	251.00
IUUC-Oin-080085	Oryza indica	33.16	1.00e-56	213.00
IUUC-Olo-081048	Oryza longistaminata	32.14	3.00e-46	179.00
IUUC-Ome-081324	Oryza meridionalis	34.12	3.00e-68	251.00
IUUC-Oni-082548	Oryza nivara	34.12	4.00e-68	251.00
IUUC-Opu-084008	Oryza punctata	34.12	2.00e-69	255.00
IUUC-Oru-084339	Oryza rufipogon	34.12	6.00e-68	250.00
IUUC-Osa-085782	Oryza sativa	34.12	6.00e-68	250.00
IUUC-Ola-087302	Oryzias latipes	30.02	2.00e-54	206.00
IUUC-Olu-087611	Ostreococcus lucimarinus	38.61	5.00e-78	284.00
IUUC-Oga-087935	Otolemur garnettii	33.93	1.00e-59	223.00
IUUC-Ptr-090715	Pan troglodytes	33.82	2.00e-63	236.00
IUUC-Pan-092318	Papio anubis	33.93	7.00e-60	224.00
IUUC-Psi-094053	Pelodiscus sinensis	33.75	3.00e-58	218.00
IUUC-Pno-094985	Phaeosphaeria nodorum	50.24	0.00e+00	914.00
IUUC-Ppa-095819	Physcomitrella patens	33.49	1.00e-68	253.00
IUUC-Pfo-096857	Poecilia formosa	33.92	3.00e-60	225.00
IUUC-Pab-098047	Pongo abelii	33.82	2.00e-63	235.00
IUUC-Pop-099587	Populus trichocarpa	33.99	1.00e-66	246.00
IUUC-Pca-100558	Procavia capensis	36.92	2.00e-35	142.00
IUUC-Ppe-101261	Prunus persica	32.13	1.00e-66	246.00
IUUC-Pva-102683	Pteropus vampyrus	33.58	8.00e-61	227.00
IUUC-Pgr-103660	Puccinia graminis	39.50	5.00e-74	270.00
IUUC-Ptt-103900	Puccinia triticina	40.86	4.00e-74	271.00
IUUC-Pte-104209	Pyrenophora teres	49.77	0.00e+00	972.00
IUUC-Pyt-104802	Pyrenophora triticirepentis	49.53	0.00e+00	957.00
IUUC-Rno-105566	Rattus norvegicus	33.82	3.00e-63	235.00
IUUC-Sce-106291	Saccharomyces cerevisiae	35.14	4.00e-118	417.00
IUUC-Sha-107514	Sarcophilus harrisii	31.28	1.00e-47	183.00
IUUC-Sja-107833	Schizosaccharomyces japonicus	35.44	2.00e-146	511.00
IUUC-Spo-108162	Schizosaccharomyces pombe	34.52	2.00e-152	531.00
IUUC-Ssl-108629	Sclerotinia sclerotiorum	50.39	0.00e+00	691.00
IUUC-Smo-109186	Selaginella moellendorffii	32.60	6.00e-67	247.00
IUUC-Sit-110730	Setaria italica	33.41	4.00e-68	251.00
IUUC-Sly-111547	Solanum lycopersicum	33.00	1.00e-66	246.00
IUUC-Stu-112705	Solanum tuberosum	33.00	7.00e-66	244.00
IUUC-Sar-113222	Sorex araneus	30.46	8.00e-53	200.00
IUUC-Sbi-114272	Sorghum bicolor	33.65	7.00e-69	253.00
IUUC-Sre-115061	Sporisorium reilianum	33.01	6.00e-84	303.00
IUUC-Ssc-116364	Sus scrofa	33.42	7.00e-60	224.00
IUUC-Tgu-116645	Taeniopygia guttata	34.62	5.00e-60	224.00
IUUC-Tru-117590	Takifugu rubripes	32.75	2.00e-61	229.00
IUUC-Tsy-119212	Tarsius syrichta	34.13	4.00e-52	197.00
IUUC-Tni-119915	Tetraodon nigroviridis	30.77	1.00e-61	229.00
IUUC-Tca-121765	Theobroma cacao	28.78	4.00e-71	261.00
IUUC-Tre-121887	Trichoderma reesei	68.58	0.00e+00	1408.00
IUUC-Tvi-122262	Trichoderma virens	69.00	0.00e+00	1403.00
IUUC-Tae-124063	Triticum aestivum	29.44	3.00e-34	137.00
IUUC-Tur-126483	Triticum urartu	33.33	2.00e-68	252.00
IUUC-Tme-127202	Tuber melanosporum	48.24	7.00e-180	622.00
IUUC-Tbe-127350	Tupaia belangeri	26.16	4.00e-30	125.00
IUUC-Ttr-129077	Tursiops truncatus	32.81	1.00e-54	206.00
IUUC-Uma-129465	Ustilago maydis	31.99	7.00e-81	293.00
IUUC-Vvi-131397	Vitis vinifera	33.65	6.00e-68	251.00
IUUC-Xtr-132057	Xenopus tropicalis	34.41	2.00e-63	235.00
IUUC-Xma-134139	Xiphophorus maculatus	34.40	1.00e-51	196.00
IUUC-Yli-134424	Yarrowia lipolytica	52.41	1.00e-126	446.00
IUUC-Zma-135506	Zea mays	33.72	1.00e-68	253.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence