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Tag Content
UUCD2 ID IUUC-Ola-087344
UUCD1 version UUC-OrL-01153
Ensembl Protein ID ENSORLP00000007150.1
UniProt Accession H2LM80; H2LM80_ORYLA
Genbank Protein ID ENSORLP00000007150
Protein Name Ubiquitinyl hydrolase 1
Genbank Nucleotide ID BAAF04009504
Gene Name usp13
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000005687.1 ENSORLT00000007151.1 ENSORLP00000007150.1
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 5.30e-52 177.4 323 865
UBD/Alpha-Helix/UBA 1.20e-18 66.9 733 771
Active Site
Position(s) Description Evidence
332 Nucleophile {ECO:0000256|PIRSR:PIRSR016308-1}
828 Proton acceptor {ECO:0000256|PIRSR:PIRSR016308-1}
Domain Profile

   DUB/USP
   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeel......................wkskkka 67
           tG+kNlg +CY+  v+Q L+++p++++++   + +++ + +p +p+++++++++kl + l                       k++++ 
   Q: 323  TGIKNLGDSCYLSTVMQILFSVPDFQRMFVG-NLQRIFDYSPLDPTQDFATQMAKLGHGLlsgqyskppmkselieqvmkeeHKQQQRG 410
           7******************************.7777778889******************9999999999998888876554488899* PP
   S: 68   vsprellkalkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikc 156
           +spr++++ ++k ++efs+++qqDa+Efl ++++ + +                              + + +  sd F++ ++++i+c
   Q: 411  ISPRMFKALVSKGHPEFSSNRQQDAHEFLLHIINLFLQRN----------------------------STGLENPSDSFRFLVEERIQC 471
           **********************************987765............................67888999************* PP
   S: 157  lecdnvs..sreepfldlslpvpgkeetkke...........................slqdcLesftkeeelegenkyycekckkkqe 216
            + ++v   +r +  ++l+ p++  +++  e                            ++ cL++ft++e++ +   ++++  ++k+ 
   Q: 472  CQTRRVRysQRVDYCIQLPAPIEAATNR--EellayeakrkeaeenmgtppepvrariPFTACLQAFTEPENVPD---FWSSALQAKSA 555
           8887776334444444555555554444..3569***************************************97...*********** PP
   S: 217  aekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts...................................... 267
            +k+ ++ ++Pe+Li+++k+f+f  + ++++k++  +++p+ Ldls+  ++                                      
   Q: 556  GVKTSRFASFPEYLIVQIKKFTFGVD-WVPKKLDLTIDVPDFLDLSRLRATglqadeeelpdlmppivlpedtrgaceiqfnntcqnvf 643
           ***********************776.*******************9888878888888888888888888888888887777777777 PP
   S: 268  ......................................................................................... 267
                                                                                                    
   Q: 644  lnfifshtvapemdetavmqlaemgfpleacrkavyytgnmgpemafnwiiahmeepdfaepltlpslmdpgpstsdgptgatpignsp 732
           77777777777777777777777777777777777777777777777777777766666666666666666666666666666666666 PP
   S: 268  ........................peekqke.................................................kkkYeLiav 283
                                   +     +                                                 + +YeL+a 
   Q: 733  peesiailtsmgfprahsihalkaT-----NnnleraldwifthpeeeetdalsdmadtepndnafssdregsgsrvkdgPGRYELFAF 816
           6666666655555555555555550.....05555555555555555666677777777777788888888888999999********* PP
   S: 284  vvHsG.slssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           ++H G s+ sGHYv+++k+ +g+W+ ++D+kV  +  e+  +   + +Y++fY+r
   Q: 817  ISHIGaSTMSGHYVCHIKK-EGRWVIYNDHKVCLS--ERPPK---DLGYIYFYHR 865
           *******************.9***********988..78888...89******97 PP
   

   UBD/Alpha-Helix/UBA
   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLldg 41
            e+ ++ l++MGF+r + + aL a+nnnle+A+++++++
   Q: 733  PEESIAILTSMGFPRAHSIHALKATNNNLERALDWIFTH 771
           5899*********************************98 PP
   
Organism Oryzias latipes
Protein Sequence
(Fasta)
MAADLGELLV PYMPTIRVPR TGDRVFKSEC AFSFDSPESE GGLYVCMNTF LGFGREHVER 60
HYRKTGQSVY MHLKRHVKEK TTGAAGGAIP RRRNGKVFLD LELNRDFNGE DFEYEDEAKL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ola-087344|DUB,USP;UBD,UBA|Oryzias latipes
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGCTGCAG ACTTGGGAGA GCTGTTGGTC CCCTACATGC CCACCATCCG AGTCCCCAGA 60
ACCGGAGACA GGGTCTTCAA GAGCGAGTGC GCCTTTTCGT TCGACTCCCC CGTAAGTGTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ola-087344|DUB,USP;UBD,UBA|Oryzias latipes
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR001394--Peptidase_C19_UCH
IPR015940--UBA
IPR009060--UBA-like
IPR016652--Ubiquitinyl_hydrolase
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP
PROSITE

PS50030--UBA
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP
Pfam

PF00627--UBA
PF00443--UCH
PF02148--zf-UBP
SMART

SM00165--UBA
SM00290--ZnF_UBP
Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001356 Ailuropoda melanoleuca 70.47 0.00e+00 1222.00
IUUC-Apl-003712 Anas platyrhynchos 71.82 0.00e+00 1206.00
IUUC-Aca-004634 Anolis carolinensis 72.64 0.00e+00 1239.00
IUUC-Ame-011470 Astyanax mexicanus 80.00 0.00e+00 1414.00
IUUC-Bta-013349 Bos taurus 70.69 0.00e+00 1233.00
IUUC-Cja-019021 Callithrix jacchus 70.31 0.00e+00 1215.00
IUUC-Cfa-020614 Canis familiaris 70.47 0.00e+00 1221.00
IUUC-Cpo-022484 Cavia porcellus 69.29 0.00e+00 1154.00
IUUC-Csa-024078 Chlorocebus sabaeus 70.54 0.00e+00 1224.00
IUUC-Cho-024522 Choloepus hoffmanni 59.06 0.00e+00 900.00
IUUC-Cme-027335 Cyanidioschyzon merolae 25.12 1.00e-51 198.00
IUUC-Dre-027651 Danio rerio 80.82 0.00e+00 1484.00
IUUC-Dno-028975 Dasypus novemcinctus 70.03 0.00e+00 1213.00
IUUC-Dor-030130 Dipodomys ordii 60.00 0.00e+00 689.00
IUUC-Ete-032251 Echinops telfairi 59.42 0.00e+00 947.00
IUUC-Eca-033568 Equus caballus 71.12 0.00e+00 1158.00
IUUC-Fca-036280 Felis catus 70.12 0.00e+00 1156.00
IUUC-Fal-036610 Ficedula albicollis 72.21 0.00e+00 1183.00
IUUC-Gmo-038906 Gadus morhua 82.45 0.00e+00 1453.00
IUUC-Gga-041215 Gallus gallus 71.30 0.00e+00 1255.00
IUUC-Gac-042441 Gasterosteus aculeatus 87.73 0.00e+00 1571.00
IUUC-Ggo-044446 Gorilla gorilla 70.43 0.00e+00 1224.00
IUUC-Hsa-046546 Homo sapiens 70.43 0.00e+00 1225.00
IUUC-Itr-048147 Ictidomys tridecemlineatus 67.56 0.00e+00 1129.00
IUUC-Lch-050425 Latimeria chalumnae 73.83 0.00e+00 1308.00
IUUC-Loc-052072 Lepisosteus oculatus 76.95 0.00e+00 1331.00
IUUC-Laf-053909 Loxodonta africana 69.12 0.00e+00 1205.00
IUUC-Mcc-054686 Macaca mulatta 70.43 0.00e+00 1224.00
IUUC-Meu-056361 Macropus eugenii 73.25 0.00e+00 943.00
IUUC-Mga-059972 Meleagris gallopavo 70.83 0.00e+00 1172.00
IUUC-Mmr-060916 Microcebus murinus 69.97 0.00e+00 1220.00
IUUC-Mdo-062302 Monodelphis domestica 72.56 0.00e+00 1301.00
IUUC-Mmu-063639 Mus musculus 70.06 0.00e+00 1218.00
IUUC-Mac-065634 Musa acuminata 38.35 2.00e-169 589.00
IUUC-Mpu-066533 Mustela putorius furo 70.36 0.00e+00 1221.00
IUUC-Mlu-067786 Myotis lucifugus 68.24 0.00e+00 1160.00
IUUC-Nle-069997 Nomascus leucogenys 69.87 0.00e+00 1145.00
IUUC-Ont-071859 Oreochromis niloticus 88.44 0.00e+00 1595.00
IUUC-Oan-072959 Ornithorhynchus anatinus 76.35 3.00e-110 390.00
IUUC-Ocu-074265 Oryctolagus cuniculus 69.85 0.00e+00 1213.00
IUUC-Oga-088734 Otolemur garnettii 70.40 0.00e+00 1204.00
IUUC-Oar-089636 Ovis aries 71.39 0.00e+00 1196.00
IUUC-Ptr-090982 Pan troglodytes 70.31 0.00e+00 1224.00
IUUC-Pan-091991 Papio anubis 70.54 0.00e+00 1225.00
IUUC-Psi-093509 Pelodiscus sinensis 72.84 0.00e+00 1279.00
IUUC-Pfo-096029 Poecilia formosa 88.34 0.00e+00 1616.00
IUUC-Pab-098672 Pongo abelii 66.97 0.00e+00 1133.00
IUUC-Pva-102545 Pteropus vampyrus 65.90 0.00e+00 1111.00
IUUC-Rno-105210 Rattus norvegicus 69.94 0.00e+00 1211.00
IUUC-Sar-113733 Sorex araneus 74.94 5.00e-178 617.00
IUUC-Tgu-116591 Taeniopygia guttata 72.73 0.00e+00 1269.00
IUUC-Tru-118627 Takifugu rubripes 86.85 0.00e+00 1589.00
IUUC-Tsy-119278 Tarsius syrichta 62.98 0.00e+00 1029.00
IUUC-Tni-120804 Tetraodon nigroviridis 87.39 0.00e+00 1587.00
IUUC-Ttr-128295 Tursiops truncatus 64.10 0.00e+00 1103.00
IUUC-Vpa-130170 Vicugna pacos 61.94 0.00e+00 981.00
IUUC-Xtr-132809 Xenopus tropicalis 67.89 0.00e+00 1198.00
Created Date 25-Jun-2017

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