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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Dme-031917
UUCD1 version UUC-DrM-00135
Ensembl Protein ID FBpp0087335
UniProt Accession P49846; Q9V5R1; TAF5_DROME
Genbank Protein ID AAC46481.1; AAF58737.1; AAK93384.1
Protein Name Transcription initiation factor TFIID subunit 5; TAFII-80; Transcription initiation factor TFIID 85 kDa subunit
Genbank Nucleotide ID U06460; AE013599; AY051960
Gene Name Taf5; TAF80; CG7704
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
FBgn0010356 FBtr0088240 FBpp0087335
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IIDiRefIndexPINAMentha
Post-translational Modifications (PTMs)
dbPAFPHOSIDA
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.10e-41 137.6 532 569
UBD/Beta-Prp 3.40e-63 213.6 374 649
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
    gH ++v c++f ++ +++++Gs D t+++WD tg ++
   Q: 532 GHLSDVDCVQFhPNsNYVATGSSDRTVRLWDNMTGQSV 569
    8***********777****************9988765 PP
   


   UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl...............................lrslsgheaevtavkfspdgkilvtgs 71
    l++h+ +tc +s+d+++la g+ d+++++w++t+ kl rsl gh+++v+ + f p+ ++l+++s
   Q: 374 LNSHQG--VTCAEISDDSTMLACGFGDSSVRIWSLTPAKLrtlkdadslreldkesadinvrmlddrsgevTRSLMGHTGPVYRCAFAPEMNLLLSCS 469
    455555..788*************************************************************************************** PP
   S: 72 eDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktg 169
    eD ti++w+l t +cv+t++gh + v++++f p g+++vs s d+t+r+w ++++q l+ ++ gh + v cv++hp++n++++Gs DrtvrlWd tg
   Q: 470 EDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALR-VFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTG 566
    ***********************************************************.************************************** PP
   S: 170 kllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrs 253
    + +r +tg h++sv sl+f+ g++l+sgs d +++wdl++g+ v tl ht++v+ + fs++++ l+ ++ D+ + +Wd +
   Q: 567 QSVRLMTG-HKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHK 649
    *******9.***********************************************************************8544 PP
   

Organism Drosophila melanogaster
Functional Description
(View)

Functional Description



     TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. May play a role in helping to anchor Taf4 within the TFIID complex. May be involved in transducing signals from various transcriptional regulators to the RNA polymerase II transcription machinery.
TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. May play a role in helping to anchor Taf4 within the TFIID complex. May be involved in transducing signals from various transcriptional regulators to the RNA polymerase II transcription machinery.
Protein Sequence
(Fasta)
MSLEVSNING GNGTQLSHDK RELLCLLKLI KKYQLKSTEE LLCQEANVSS VELSEISESD 60
VQQVLGAVLG AGDANRERKH VQSPAQGHKQ SAVTEANAAE ELAKFIDDDS FDAQHYEQAY 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Dme-031917|E3,WD_repeat;UBD,Beta-Prp|Drosophila melanogaster
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCTGGTCACA CTTTTCCACG CATAACAAAA TAGTACACAA GTTCCATATA TTTCAATTTT 60
CCGCGAAAAT GAGCCTGGAA GTGAGCAATA TAAACGGGGG AAACGGTACT CAATTGTCCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Dme-031917|E3,WD_repeat;UBD,Beta-Prp|Drosophila melanogaster
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0903--Direct protein sequencing
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007582--TFIID_NTD2
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0005669--C:transcription factor TFIID complex
GO:0022008--P:neurogenesis
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0007221--P:positive regulation of transcription of Notch receptor target
GO:0051123--P:RNA polymerase II transcriptional preinitiation complex assembly
GO:0006367--P:transcription initiation from RNA polymerase II promoter

KEGG dme:Dmel_CG7704
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000851 Aegilops tauschii 36.53 8.00e-62 230.00
IUUC-Aml-001607 Ailuropoda melanoleuca 47.64 8.00e-161 560.00
IUUC-Atr-003136 Amborella trichopoda 42.67 3.00e-86 312.00
IUUC-Apl-004193 Anas platyrhynchos 47.48 3.00e-158 551.00
IUUC-Aca-004522 Anolis carolinensis 46.48 2.00e-163 568.00
IUUC-Aly-006476 Arabidopsis lyrata 33.28 4.00e-98 351.00
IUUC-Ath-006587 Arabidopsis thaliana 33.12 7.00e-98 350.00
IUUC-Ago-007736 Ashbya gossypii 39.60 8.00e-82 297.00
IUUC-Acl-008092 Aspergillus clavatus 29.14 2.00e-81 296.00
IUUC-Afl-008659 Aspergillus flavus 29.12 4.00e-80 291.00
IUUC-Afu-008902 Aspergillus fumigatus 29.89 2.00e-81 295.00
IUUC-Ani-009462 Aspergillus nidulans 28.69 3.00e-69 255.00
IUUC-Aor-010083 Aspergillus oryzae 29.12 4.00e-80 291.00
IUUC-Ate-010271 Aspergillus terreus 30.59 4.00e-81 295.00
IUUC-Ame-010721 Astyanax mexicanus 47.48 3.00e-162 564.00
IUUC-Bgr-012257 Blumeria graminis 31.54 8.00e-60 224.00
IUUC-Bta-013539 Bos taurus 47.64 6.00e-161 560.00
IUUC-Bci-013737 Botrytis cinerea 30.73 4.00e-61 228.00
IUUC-Bdi-015041 Brachypodium distachyon 34.98 2.00e-87 316.00
IUUC-Bol-015483 Brassica oleracea 44.00 9.00e-84 303.00
IUUC-Bra-017147 Brassica rapa 44.00 1.00e-83 303.00
IUUC-Cel-018451 Caenorhabditis elegans 30.39 6.00e-83 300.00
IUUC-Cja-018881 Callithrix jacchus 47.64 8.00e-161 560.00
IUUC-Cfa-020056 Canis familiaris 47.64 6.00e-161 560.00
IUUC-Cpo-021454 Cavia porcellus 45.55 2.00e-161 561.00
IUUC-Cre-022736 Chlamydomonas reinhardtii 34.29 4.00e-47 181.00
IUUC-Csa-023045 Chlorocebus sabaeus 47.80 5.00e-160 556.00
IUUC-Cho-024284 Choloepus hoffmanni 52.67 1.00e-94 339.00
IUUC-Cin-025457 Ciona intestinalis 50.55 4.00e-85 306.00
IUUC-Csv-025882 Ciona savignyi 42.90 2.00e-141 495.00
IUUC-Cgl-026392 Colletotrichum gloeosporioides 29.42 1.00e-55 210.00
IUUC-Cne-026876 Cryptococcus neoformans 38.48 5.00e-66 245.00
IUUC-Cme-027302 Cyanidioschyzon merolae 39.26 3.00e-71 262.00
IUUC-Dre-027980 Danio rerio 46.31 3.00e-158 551.00
IUUC-Dno-028863 Dasypus novemcinctus 47.64 1.00e-160 559.00
IUUC-Dor-030561 Dipodomys ordii 47.64 9.00e-161 560.00
IUUC-Dse-031547 Dothistroma septosporum 33.41 2.00e-62 233.00
IUUC-Ete-032319 Echinops telfairi 36.53 3.00e-100 358.00
IUUC-Eca-033927 Equus caballus 47.47 9.00e-163 566.00
IUUC-Eeu-034449 Erinaceus europaeus 49.60 4.00e-138 484.00
IUUC-Fca-036325 Felis catus 47.64 1.00e-160 559.00
IUUC-Fal-036604 Ficedula albicollis 47.83 2.00e-160 558.00
IUUC-Fox-038049 Fusarium oxysporum 32.48 4.00e-44 172.00
IUUC-Gmo-038832 Gadus morhua 44.24 8.00e-153 533.00
IUUC-Gga-041147 Gallus gallus 47.65 3.00e-164 571.00
IUUC-Gac-041373 Gasterosteus aculeatus 46.72 3.00e-157 547.00
IUUC-Gma-043230 Glycine max 33.65 2.00e-104 372.00
IUUC-Ggo-045526 Gorilla gorilla 46.42 4.00e-100 357.00
IUUC-Hsa-045971 Homo sapiens 47.64 7.00e-161 560.00
IUUC-Hvu-047695 Hordeum vulgare 43.15 2.00e-74 272.00
IUUC-Itr-048400 Ictidomys tridecemlineatus 47.64 3.00e-161 561.00
IUUC-Kpa-049402 Komagataella pastoris 39.90 2.00e-86 313.00
IUUC-Lch-049526 Latimeria chalumnae 46.37 3.00e-148 518.00
IUUC-Lpe-051560 Leersia perrieri 42.41 5.00e-78 284.00
IUUC-Loc-052882 Lepisosteus oculatus 47.31 6.00e-161 560.00
IUUC-Lma-053212 Leptosphaeria maculans 33.65 2.00e-63 236.00
IUUC-Laf-053859 Loxodonta africana 47.64 1.00e-160 559.00
IUUC-Mcc-054957 Macaca mulatta 49.61 3.00e-144 504.00
IUUC-Meu-056182 Macropus eugenii 40.66 5.00e-71 261.00
IUUC-Mor-057024 Magnaporthe oryzae 33.03 4.00e-52 198.00
IUUC-Mtr-058754 Medicago truncatula 33.68 1.00e-107 382.00
IUUC-Mla-058881 Melampsora laricipopulina 34.74 5.00e-71 261.00
IUUC-Mga-059776 Meleagris gallopavo 47.82 3.00e-164 571.00
IUUC-Mvi-060208 Microbotryum violaceum 44.83 2.00e-75 276.00
IUUC-Mmr-061783 Microcebus murinus 49.61 3.00e-144 504.00
IUUC-Mdo-062856 Monodelphis domestica 47.98 8.00e-162 563.00
IUUC-Mmu-064218 Mus musculus 47.64 5.00e-161 560.00
IUUC-Mac-064886 Musa acuminata 49.80 3.00e-62 232.00
IUUC-Mpu-065735 Mustela putorius furo 47.64 9.00e-161 559.00
IUUC-Mlu-067544 Myotis lucifugus 47.56 5.00e-159 553.00
IUUC-Nfi-068502 Neosartorya fischeri 29.74 1.00e-81 296.00
IUUC-Ncr-068891 Neurospora crassa 31.35 2.00e-55 209.00
IUUC-Nle-069389 Nomascus leucogenys 47.64 6.00e-161 560.00
IUUC-Opr-071042 Ochotona princeps 47.85 9.00e-104 370.00
IUUC-Ont-071455 Oreochromis niloticus 47.56 7.00e-162 563.00
IUUC-Oan-073181 Ornithorhynchus anatinus 46.46 2.00e-161 561.00
IUUC-Ocu-073758 Oryctolagus cuniculus 46.97 2.00e-160 558.00
IUUC-Oba-075739 Oryza barthii 41.86 2.00e-68 252.00
IUUC-Obr-076111 Oryza brachyantha 35.19 1.00e-95 343.00
IUUC-Ogl-077914 Oryza glaberrima 41.39 3.00e-73 268.00
IUUC-Ogu-078190 Oryza glumaepatula 46.04 2.00e-69 255.00
IUUC-Oin-079473 Oryza indica 42.82 5.00e-76 278.00
IUUC-Olo-080645 Oryza longistaminata 45.70 2.00e-58 219.00
IUUC-Ome-081831 Oryza meridionalis 38.66 8.00e-59 220.00
IUUC-Opu-083325 Oryza punctata 31.43 6.00e-75 274.00
IUUC-Oru-085154 Oryza rufipogon 46.27 8.00e-69 253.00
IUUC-Osa-086189 Oryza sativa 42.82 5.00e-76 278.00
IUUC-Ola-086574 Oryzias latipes 48.24 8.00e-165 573.00
IUUC-Olu-087616 Ostreococcus lucimarinus 36.88 1.00e-71 263.00
IUUC-Oga-088827 Otolemur garnettii 47.64 8.00e-161 560.00
IUUC-Oar-089648 Ovis aries 47.64 6.00e-161 560.00
IUUC-Ptr-091195 Pan troglodytes 47.64 6.00e-161 560.00
IUUC-Pan-091978 Papio anubis 47.64 4.00e-161 560.00
IUUC-Psi-093598 Pelodiscus sinensis 47.94 4.00e-154 537.00
IUUC-Pma-094593 Petromyzon marinus 44.11 1.00e-62 233.00
IUUC-Pfo-097120 Poecilia formosa 47.56 4.00e-161 560.00
IUUC-Pab-098771 Pongo abelii 47.64 7.00e-161 560.00
IUUC-Pop-099542 Populus trichocarpa 41.38 2.00e-84 306.00
IUUC-Pca-100804 Procavia capensis 42.17 5.00e-119 420.00
IUUC-Ppe-101686 Prunus persica 34.91 4.00e-96 344.00
IUUC-Pva-102414 Pteropus vampyrus 44.28 2.00e-139 488.00
IUUC-Pgr-103603 Puccinia graminis 38.05 3.00e-71 262.00
IUUC-Ptt-103995 Puccinia triticina 39.78 2.00e-66 247.00
IUUC-Pte-104359 Pyrenophora teres 32.39 3.00e-62 232.00
IUUC-Pyt-104523 Pyrenophora triticirepentis 31.91 4.00e-61 228.00
IUUC-Rno-105064 Rattus norvegicus 47.64 3.00e-161 561.00
IUUC-Sce-106186 Saccharomyces cerevisiae 37.04 4.00e-76 278.00
IUUC-Sha-106582 Sarcophilus harrisii 47.90 3.00e-160 557.00
IUUC-Sja-107683 Schizosaccharomyces japonicus 32.80 6.00e-89 321.00
IUUC-Spo-108142 Schizosaccharomyces pombe 33.87 5.00e-89 321.00
IUUC-Ssl-108456 Sclerotinia sclerotiorum 31.94 1.00e-63 236.00
IUUC-Smo-109097 Selaginella moellendorffii 33.76 1.00e-95 343.00
IUUC-Sit-109804 Setaria italica 35.84 8.00e-93 333.00
IUUC-Sly-111693 Solanum lycopersicum 44.29 5.00e-83 301.00
IUUC-Sar-113412 Sorex araneus 46.55 1.00e-100 359.00
IUUC-Sbi-114849 Sorghum bicolor 35.08 2.00e-90 325.00
IUUC-Sre-114945 Sporisorium reilianum 41.67 7.00e-66 244.00
IUUC-Ssc-115582 Sus scrofa 52.48 1.00e-123 435.00
IUUC-Tgu-116899 Taeniopygia guttata 47.82 5.00e-162 563.00
IUUC-Tru-118011 Takifugu rubripes 47.56 2.00e-158 551.00
IUUC-Tsy-119622 Tarsius syrichta 34.22 5.00e-47 181.00
IUUC-Tni-120598 Tetraodon nigroviridis 47.40 3.00e-158 551.00
IUUC-Tca-121247 Theobroma cacao 33.95 2.00e-99 355.00
IUUC-Tre-121949 Trichoderma reesei 31.42 2.00e-55 210.00
IUUC-Tvi-122626 Trichoderma virens 29.71 5.00e-56 211.00
IUUC-Tae-123335 Triticum aestivum 44.64 1.00e-76 280.00
IUUC-Tur-126005 Triticum urartu 42.69 3.00e-70 258.00
IUUC-Tme-126904 Tuber melanosporum 42.12 3.00e-80 291.00
IUUC-Tbe-127254 Tupaia belangeri 44.11 2.00e-139 489.00
IUUC-Ttr-128544 Tursiops truncatus 47.47 4.00e-160 557.00
IUUC-Uma-129379 Ustilago maydis 36.03 1.00e-68 254.00
IUUC-Vda-129761 Verticillium dahliae 34.93 1.00e-49 190.00
IUUC-Vpa-130485 Vicugna pacos 47.64 1.00e-160 559.00
IUUC-Vvi-131171 Vitis vinifera 33.81 3.00e-99 355.00
IUUC-Xtr-132762 Xenopus tropicalis 43.33 5.00e-133 467.00
IUUC-Xma-133583 Xiphophorus maculatus 47.39 3.00e-161 561.00
IUUC-Yli-134446 Yarrowia lipolytica 32.65 2.00e-92 332.00
IUUC-Zma-135722 Zea mays 44.70 4.00e-79 288.00
Created Date 25-Jun-2017

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