iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037058

Ensembl Protein ID

ENSFALP00000009164.1

UniProt Accession

U3K2B0; U3K2B0_FICAL

Genbank Protein ID

ENSFALP00000009164

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01000884

Gene Name

RRP9

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000008778.1	ENSFALT00000009203.1	ENSFALP00000009164.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-35	119.1	326	361
UBD/Beta-Prp	2.10e-49	168.0	149	410

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvl 35
           gH++s+ c+++ ++ ++vsG+dDg++ +W l++ ++
   Q: 326  GHQGSIDCIQLiNEEHMVSGADDGSLALWGLTKKKP 361
           8*********9999****************998765 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkl...........lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkc 86
           h+ ++tc+ +spd+++++++s+dg+++ w+v++gk             ++  gh + v ++ +s+dgk+l+tg + ++i +wd  t+k 
   Q: 149  HQLPVTCLVISPDDRFIFSSSKDGSLIKWEVDSGKRlcvvpggkkgtEERHMGHASHVLCMAISSDGKYLATGDRNKLIMIWDAATCKR 237
           6779999*****************************99******9999999999*********************************** PP
   S: 87   vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl 175
           +h+++gh d v  lsf + ++ l s+shdr ++vwd+ ++  +e tl gh++v++++ + + ++++ +G+ D+tvrlW+++ ++ l  +
   Q: 238  LHIFTGHRDAVSGLSFRKGTHQLYSASHDRCVKVWDVAENAYVE-TLFGHQDVITGLDSLSRECCVTAGGRDGTVRLWKIPEESQL-VF 324
           ******************99***********************9.***********************************888776.59 PP
   S: 176  tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec.vrtlnght..........dnvksvrfspnderlvsgssDgsiriWdlr 252
           +g h++s+ ++++  + +++vsg++dg++ lw l +++    ++++h            +++ v++++n+++l++gs+ gs+++W + 
   Q: 325  SG-HQGSIDCIQLINE-EHMVSGADDGSLALWGLTKKKPlALAQQAHGeqdsqglqqpYWISAVAALRNSDLLATGSHSGSVKLWKCG 410
           88.*********9886.7****************977774556777778899999999***************************765 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

VAIHCHCHLA GLPAAGLGPK GHGGQRTQRA PGADGRPRAT AGRPADEEVS SDSETESPLL 60
GRRRREAAEE EVEETPQEKK LRLAKQYLEE LRQLAEEERA EEEEELEPAD LIGDRLKEDV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAGCAATCC ACTGTCACTG TCACCTTGCG GGGCTGCCAG CTGCAGGACT GGGCCCGAAG 60
GGCCACGGGG GGCAGAGGAC GCAGCGCTGG GGGCCCGGGG GCCCTGGGGC TCTGACAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0031428--C:box C/D snoRNP complex
GO:0034511--F:U3 snoRNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000586	Aegilops tauschii	34.75	2.00e-56	213.00
IUUC-Aml-002072	Ailuropoda melanoleuca	68.09	8.00e-167	579.00
IUUC-Atr-002824	Amborella trichopoda	37.07	2.00e-71	262.00
IUUC-Apl-003264	Anas platyrhynchos	83.51	0.00e+00	625.00
IUUC-Aca-004898	Anolis carolinensis	77.59	1.00e-180	625.00
IUUC-Aly-005535	Arabidopsis lyrata	38.24	3.00e-67	249.00
IUUC-Ath-007119	Arabidopsis thaliana	38.07	1.00e-72	267.00
IUUC-Ago-007710	Ashbya gossypii	29.18	1.00e-55	211.00
IUUC-Acl-008345	Aspergillus clavatus	35.52	2.00e-58	220.00
IUUC-Afl-008718	Aspergillus flavus	33.97	7.00e-55	208.00
IUUC-Afu-008966	Aspergillus fumigatus	30.54	1.00e-54	207.00
IUUC-Ani-009214	Aspergillus nidulans	33.17	8.00e-58	218.00
IUUC-Ang-009774	Aspergillus niger	34.76	1.00e-59	223.00
IUUC-Aor-009956	Aspergillus oryzae	33.97	7.00e-55	208.00
IUUC-Ate-010449	Aspergillus terreus	32.49	4.00e-59	222.00
IUUC-Ame-011860	Astyanax mexicanus	70.10	3.00e-167	581.00
IUUC-Bgr-012213	Blumeria graminis	32.71	1.00e-65	243.00
IUUC-Bta-012698	Bos taurus	72.96	2.00e-169	588.00
IUUC-Bci-013973	Botrytis cinerea	29.09	1.00e-62	233.00
IUUC-Bdi-014790	Brachypodium distachyon	36.43	2.00e-62	233.00
IUUC-Bol-016068	Brassica oleracea	38.65	5.00e-67	248.00
IUUC-Bra-017410	Brassica rapa	38.65	4.00e-62	231.00
IUUC-Cel-018616	Caenorhabditis elegans	36.65	2.00e-73	270.00
IUUC-Cja-019532	Callithrix jacchus	69.61	7.00e-168	583.00
IUUC-Cfa-020961	Canis familiaris	65.98	3.00e-161	561.00
IUUC-Cpo-021527	Cavia porcellus	70.83	2.00e-167	582.00
IUUC-Csa-023106	Chlorocebus sabaeus	70.59	2.00e-166	578.00
IUUC-Cin-025670	Ciona intestinalis	52.41	6.00e-121	427.00
IUUC-Csv-026172	Ciona savignyi	52.15	2.00e-115	408.00
IUUC-Cgl-026619	Colletotrichum gloeosporioides	34.22	3.00e-65	242.00
IUUC-Cne-027070	Cryptococcus neoformans	30.72	4.00e-48	185.00
IUUC-Cme-027125	Cyanidioschyzon merolae	28.61	4.00e-37	149.00
IUUC-Dre-027919	Danio rerio	68.29	3.00e-158	551.00
IUUC-Dno-029684	Dasypus novemcinctus	68.11	2.00e-124	438.00
IUUC-Dor-030363	Dipodomys ordii	69.85	4.00e-87	315.00
IUUC-Dse-031503	Dothistroma septosporum	32.54	2.00e-62	233.00
IUUC-Dme-031979	Drosophila melanogaster	44.06	3.00e-95	342.00
IUUC-Eca-033735	Equus caballus	71.32	7.00e-165	573.00
IUUC-Fca-036193	Felis catus	70.10	2.00e-167	581.00
IUUC-Fox-038036	Fusarium oxysporum	36.30	3.00e-67	249.00
IUUC-Fso-038298	Fusarium solani	35.78	1.00e-66	247.00
IUUC-Gmo-038796	Gadus morhua	64.09	1.00e-137	483.00
IUUC-Ggr-040074	Gaeumannomyces graminis	29.44	6.00e-56	211.00
IUUC-Gga-040743	Gallus gallus	83.86	4.00e-144	503.00
IUUC-Gac-042583	Gasterosteus aculeatus	60.04	1.00e-161	562.00
IUUC-Gma-042659	Glycine max	39.59	8.00e-79	287.00
IUUC-Ggo-045543	Gorilla gorilla	70.59	2.00e-167	581.00
IUUC-Hsa-047017	Homo sapiens	71.08	7.00e-168	583.00
IUUC-Hvu-047173	Hordeum vulgare	37.44	1.00e-68	253.00
IUUC-Itr-048062	Ictidomys tridecemlineatus	65.03	1.00e-170	592.00
IUUC-Kpa-049262	Komagataella pastoris	33.75	8.00e-61	227.00
IUUC-Lch-050566	Latimeria chalumnae	71.20	4.00e-153	534.00
IUUC-Lpe-051651	Leersia perrieri	35.22	8.00e-66	244.00
IUUC-Loc-051997	Lepisosteus oculatus	68.87	6.00e-172	596.00
IUUC-Lma-053182	Leptosphaeria maculans	33.08	4.00e-64	238.00
IUUC-Laf-054105	Loxodonta africana	73.96	3.00e-168	584.00
IUUC-Mcc-055215	Macaca mulatta	70.59	8.00e-167	579.00
IUUC-Meu-055943	Macropus eugenii	67.58	4.00e-157	546.00
IUUC-Mor-057069	Magnaporthe oryzae	33.41	8.00e-64	238.00
IUUC-Mpo-057358	Magnaporthe poae	33.15	2.00e-51	196.00
IUUC-Mtr-058209	Medicago truncatula	39.24	2.00e-77	283.00
IUUC-Mla-059043	Melampsora laricipopulina	30.32	2.00e-53	203.00
IUUC-Mga-060024	Meleagris gallopavo	82.88	1.00e-167	581.00
IUUC-Mvi-060371	Microbotryum violaceum	34.06	4.00e-73	268.00
IUUC-Mmr-061403	Microcebus murinus	70.59	9.00e-171	592.00
IUUC-Mdo-063026	Monodelphis domestica	72.13	1.00e-163	569.00
IUUC-Mmu-063646	Mus musculus	70.57	1.00e-166	579.00
IUUC-Mac-064801	Musa acuminata	38.74	4.00e-77	281.00
IUUC-Mpu-065760	Mustela putorius furo	71.18	4.00e-169	587.00
IUUC-Mlu-067963	Myotis lucifugus	73.19	8.00e-168	582.00
IUUC-Nfi-068288	Neosartorya fischeri	32.13	1.00e-56	214.00
IUUC-Ncr-068679	Neurospora crassa	34.91	1.00e-59	224.00
IUUC-Nle-069766	Nomascus leucogenys	66.50	9.00e-151	526.00
IUUC-Opr-070906	Ochotona princeps	69.61	1.00e-165	575.00
IUUC-Ont-071661	Oreochromis niloticus	65.92	9.00e-170	589.00
IUUC-Oan-073465	Ornithorhynchus anatinus	59.31	6.00e-126	443.00
IUUC-Ocu-074263	Oryctolagus cuniculus	70.83	4.00e-169	587.00
IUUC-Oba-075607	Oryza barthii	35.88	2.00e-61	229.00
IUUC-Ogl-077387	Oryza glaberrima	35.26	2.00e-63	236.00
IUUC-Ogu-078323	Oryza glumaepatula	35.34	2.00e-64	239.00
IUUC-Oin-079977	Oryza indica	30.93	4.00e-43	168.00
IUUC-Olo-080857	Oryza longistaminata	35.04	9.00e-65	240.00
IUUC-Ome-081568	Oryza meridionalis	35.66	1.00e-64	240.00
IUUC-Oni-082685	Oryza nivara	36.60	3.00e-68	252.00
IUUC-Opu-084049	Oryza punctata	35.81	2.00e-64	239.00
IUUC-Oru-084348	Oryza rufipogon	36.60	3.00e-68	252.00
IUUC-Osa-086076	Oryza sativa	36.60	3.00e-68	252.00
IUUC-Ola-086991	Oryzias latipes	66.13	1.00e-166	579.00
IUUC-Olu-087891	Ostreococcus lucimarinus	36.83	4.00e-64	238.00
IUUC-Oga-088991	Otolemur garnettii	69.07	5.00e-169	587.00
IUUC-Oar-090430	Ovis aries	72.08	9.00e-169	586.00
IUUC-Ptr-091359	Pan troglodytes	71.08	1.00e-167	582.00
IUUC-Pan-092499	Papio anubis	70.59	2.00e-166	578.00
IUUC-Pma-094447	Petromyzon marinus	59.83	5.00e-119	420.00
IUUC-Pno-095008	Phaeosphaeria nodorum	32.74	7.00e-64	238.00
IUUC-Ppa-095680	Physcomitrella patens	38.80	8.00e-76	277.00
IUUC-Pfo-096430	Poecilia formosa	66.45	4.00e-170	590.00
IUUC-Pab-097649	Pongo abelii	71.32	1.00e-167	582.00
IUUC-Pop-100037	Populus trichocarpa	39.74	1.00e-76	280.00
IUUC-Pca-100317	Procavia capensis	61.28	6.00e-109	387.00
IUUC-Ppe-101999	Prunus persica	39.08	5.00e-79	288.00
IUUC-Pva-103046	Pteropus vampyrus	71.08	1.00e-168	585.00
IUUC-Pgr-103655	Puccinia graminis	29.46	1.00e-53	204.00
IUUC-Ptt-103812	Puccinia triticina	32.89	2.00e-48	187.00
IUUC-Pte-104243	Pyrenophora teres	33.33	2.00e-60	226.00
IUUC-Pyt-104512	Pyrenophora triticirepentis	33.47	5.00e-62	231.00
IUUC-Rno-104973	Rattus norvegicus	70.57	5.00e-167	580.00
IUUC-Sce-106329	Saccharomyces cerevisiae	28.23	1.00e-50	194.00
IUUC-Sha-106941	Sarcophilus harrisii	72.13	5.00e-163	566.00
IUUC-Sja-107821	Schizosaccharomyces japonicus	36.28	3.00e-68	252.00
IUUC-Spo-108329	Schizosaccharomyces pombe	37.29	9.00e-74	270.00
IUUC-Ssl-108552	Sclerotinia sclerotiorum	30.46	3.00e-63	236.00
IUUC-Smo-109198	Selaginella moellendorffii	38.51	5.00e-64	238.00
IUUC-Sit-109694	Setaria italica	36.54	4.00e-71	261.00
IUUC-Sly-111294	Solanum lycopersicum	39.33	1.00e-80	293.00
IUUC-Stu-112747	Solanum tuberosum	39.85	5.00e-82	298.00
IUUC-Sar-113315	Sorex araneus	69.05	4.00e-52	198.00
IUUC-Sbi-114694	Sorghum bicolor	35.53	8.00e-70	257.00
IUUC-Sre-114937	Sporisorium reilianum	30.12	4.00e-61	229.00
IUUC-Ssc-116127	Sus scrofa	70.83	7.00e-168	583.00
IUUC-Tgu-117242	Taeniopygia guttata	90.48	5.00e-132	462.00
IUUC-Tru-118285	Takifugu rubripes	67.08	2.00e-162	565.00
IUUC-Tni-120368	Tetraodon nigroviridis	66.83	6.00e-161	560.00
IUUC-Tca-121724	Theobroma cacao	36.01	3.00e-70	259.00
IUUC-Tre-122106	Trichoderma reesei	32.48	2.00e-66	246.00
IUUC-Tvi-122526	Trichoderma virens	32.70	7.00e-66	244.00
IUUC-Tae-125579	Triticum aestivum	37.35	4.00e-67	248.00
IUUC-Tur-126548	Triticum urartu	37.12	4.00e-67	248.00
IUUC-Tme-126985	Tuber melanosporum	36.72	4.00e-70	258.00
IUUC-Tbe-127923	Tupaia belangeri	73.19	9.00e-170	589.00
IUUC-Ttr-129308	Tursiops truncatus	68.90	5.00e-157	547.00
IUUC-Uma-129472	Ustilago maydis	29.05	4.00e-58	219.00
IUUC-Vda-129910	Verticillium dahliae	31.94	1.00e-64	240.00
IUUC-Vvi-131683	Vitis vinifera	40.60	3.00e-87	315.00
IUUC-Xtr-132118	Xenopus tropicalis	64.00	3.00e-161	561.00
IUUC-Xma-133804	Xiphophorus maculatus	66.23	3.00e-170	590.00
IUUC-Yli-134639	Yarrowia lipolytica	35.13	1.00e-63	236.00
IUUC-Zma-135884	Zea mays	35.70	2.00e-71	263.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence