iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049102

Ensembl Protein ID

CAY71697

UniProt Accession

C4R7X2; C4R7X2_KOMPG

Genbank Protein ID

CAY71697.1

Protein Name

Ubiquitin-protein ligase

Genbank Nucleotide ID

FN392322

Gene Name

PAS_chr4_0444

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr4_0444	CAY71697	CAY71697

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-07	29.8	313	355

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+++    +  + l+C H+fh  C+q w         + +CP+Cr
   Q: 313  CVICLDRLdspNRTAKKLRCDHTFHSICIQSW------MLVSRNCPVCR 355
           ********55533377899*************......888899****8 PP

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MSTVRRRSLS VGVAGTVAYM SYQKMSVATY FKLLDYSRFG IINLILVSSY YSSKFVKWVV 60
FGELRPTEIQ NLKDSLFYTS YEFILGLIMV RVLNGDVFDW NQALKYGGFF LSVLLLKSFH 120

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Nucleotide Sequence
(Fasta)

ATGTCCACAG TTAGACGAAG AAGTCTTAGC GTGGGAGTGG TAAGTAAAGC TCACAATTTT 60
GGCTTAGTGA AGTACTAACA ATTCTTTTAA GGCAGGAACC GTTGCCTACA TGTCCTACCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR032832--E3_lig_synoviolin/Hrd1
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0000836--C:Hrd1p ubiquitin ligase complex
GO:0016874--F:ligase activity
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030433--P:ubiquitin-dependent ERAD pathway

KEGG

ppa:PAS_chr4_0444

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003783	Anas platyrhynchos	38.98	1.00e-09	55.10
IUUC-Fal-037200	Ficedula albicollis	35.71	1.00e-09	55.50
IUUC-Gga-040277	Gallus gallus	38.98	7.00e-10	55.50
IUUC-Lpe-050839	Leersia perrieri	46.51	6.00e-10	54.30
IUUC-Mga-059245	Meleagris gallopavo	38.98	2.00e-09	53.10
IUUC-Ogl-076989	Oryza glaberrima	31.96	4.00e-09	54.30
IUUC-Opu-083323	Oryza punctata	44.44	2.00e-10	56.20
IUUC-Tgu-117345	Taeniopygia guttata	35.71	1.00e-09	55.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence