iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017775

Ensembl Protein ID

Bra026128.1-P

UniProt Accession

M4EBG9; M4EBG9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra026128	Bra026128.1	Bra026128.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-20	73.1	141	178
UBD/Beta-Prp	9.70e-41	140.9	12	211

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllks 38
           +s++ +++  sd t+l+s++d g i++WD+r+++ +++
   Q: 141  GSIRTVEWlhSDnTILSSCTDTGDIRLWDIRSDKIVQT 178
           689*******88799999999999*********99885 PP

UBD/Beta-Prp

   S: 11   svitcvkf...spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfs 103
            ++ +v +   +pd+ +l+++s+d+   + + +tg+ + +++gh+++v+++++++++   +++s D t+k+w+  tg+ +h+++ h++ v++++fs
   Q: 12   RPVVDVSYspvTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKHAMRAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFS 106
           333334444556677777777777777777777777777777777777777777777777777777777777777777777777.77777777777 PP
   S: 104  psgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
           ++++ l++G+  +++r++d++      +   +  g++++v++  ++  +l s+++ + +rlWd++++k+++tl+   + +v+s +++++g+++ + 
   Q: 107  EDTHLLLTGGMEKILRIFDMNRPDAPPKEVGNSPGSIRTVEWLHSDnTILSSCTDTGDIRLWDIRSDKIVQTLET--KFPVTSAEVSQDGRYITT- 199
           777777777777777777777766666555566666666665444425555555556777777777777777754..777777777777755544. PP
   S: 199  sldgtvklwdlq 210
           ++ ++vk+wd  
   Q: 200  ADGSSVKFWDAN 211
           455677777754 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGVPLVCHGH SRPVVDVSYS PVTPDGFFLI SASKDSNPML RNGETGDWIG TFEGHKGAVW 60
SCSLDKHAMR AASASADFTA KIWNALTGDE LHSFEHKHIV RACAFSEDTH LLLTGGMEKI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGGGTTC CGTTAGTATG CCACGGACAT TCTCGTCCCG TCGTCGACGT TTCTTACAGT 60
CCGGTGACTC CAGATGGGTT CTTCCTCATC AGCGCCAGCA AAGGTACGAT CCTGATTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR002885--Pentatricopeptide_repeat
IPR002469--Peptidase_S9B_N
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS51375--PPR
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF01535--PPR
PF13812--PPR_3
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000668	Aegilops tauschii	76.36	1.00e-155	542.00
IUUC-Aml-002091	Ailuropoda melanoleuca	47.23	3.00e-76	278.00
IUUC-Atr-002571	Amborella trichopoda	77.81	5.00e-159	553.00
IUUC-Apl-003327	Anas platyrhynchos	46.56	1.00e-63	236.00
IUUC-Aca-005324	Anolis carolinensis	47.78	4.00e-77	281.00
IUUC-Aly-006452	Arabidopsis lyrata	94.80	0.00e+00	654.00
IUUC-Ath-006646	Arabidopsis thaliana	94.80	0.00e+00	653.00
IUUC-Afl-008701	Aspergillus flavus	39.58	1.00e-45	176.00
IUUC-Ate-010461	Aspergillus terreus	36.09	3.00e-28	118.00
IUUC-Ame-011328	Astyanax mexicanus	47.96	9.00e-76	276.00
IUUC-Bgr-012308	Blumeria graminis	39.70	7.00e-65	240.00
IUUC-Bta-013429	Bos taurus	49.49	4.00e-79	287.00
IUUC-Bci-013803	Botrytis cinerea	37.16	2.00e-56	212.00
IUUC-Bol-016595	Brassica oleracea	99.39	0.00e+00	695.00
IUUC-Cja-018740	Callithrix jacchus	47.06	1.00e-75	276.00
IUUC-Cfa-021145	Canis familiaris	49.49	3.00e-79	288.00
IUUC-Cpo-022373	Cavia porcellus	49.49	4.00e-80	291.00
IUUC-Cre-022806	Chlamydomonas reinhardtii	52.23	2.00e-87	315.00
IUUC-Csa-023098	Chlorocebus sabaeus	49.49	7.00e-79	286.00
IUUC-Cho-024856	Choloepus hoffmanni	44.37	1.00e-62	232.00
IUUC-Cin-025541	Ciona intestinalis	48.66	3.00e-82	297.00
IUUC-Csv-026287	Ciona savignyi	49.48	2.00e-82	298.00
IUUC-Cgl-026513	Colletotrichum gloeosporioides	38.27	5.00e-55	207.00
IUUC-Cne-026869	Cryptococcus neoformans	44.70	7.00e-69	253.00
IUUC-Dre-028457	Danio rerio	48.97	4.00e-80	291.00
IUUC-Dno-029213	Dasypus novemcinctus	50.17	3.00e-80	291.00
IUUC-Dse-031350	Dothistroma septosporum	39.09	8.00e-59	220.00
IUUC-Dme-031857	Drosophila melanogaster	48.64	2.00e-80	291.00
IUUC-Ete-032558	Echinops telfairi	41.41	5.00e-49	187.00
IUUC-Eca-033934	Equus caballus	49.49	3.00e-79	288.00
IUUC-Eeu-034650	Erinaceus europaeus	38.91	4.00e-61	228.00
IUUC-Fca-035909	Felis catus	49.49	5.00e-78	284.00
IUUC-Fal-036706	Ficedula albicollis	45.45	5.00e-64	237.00
IUUC-Fox-037780	Fusarium oxysporum	39.02	5.00e-56	211.00
IUUC-Fso-038197	Fusarium solani	40.12	6.00e-52	197.00
IUUC-Gmo-039707	Gadus morhua	47.26	2.00e-75	275.00
IUUC-Ggr-040054	Gaeumannomyces graminis	36.53	6.00e-54	204.00
IUUC-Gga-040901	Gallus gallus	48.81	5.00e-78	284.00
IUUC-Gac-041876	Gasterosteus aculeatus	48.45	6.00e-75	273.00
IUUC-Ggo-044583	Gorilla gorilla	48.64	6.00e-74	270.00
IUUC-Hsa-046553	Homo sapiens	47.39	4.00e-76	277.00
IUUC-Hvu-047544	Hordeum vulgare	76.83	5.00e-158	550.00
IUUC-Itr-047980	Ictidomys tridecemlineatus	49.49	2.00e-79	288.00
IUUC-Lch-050078	Latimeria chalumnae	49.15	7.00e-79	286.00
IUUC-Loc-052598	Lepisosteus oculatus	47.22	1.00e-79	289.00
IUUC-Lma-053226	Leptosphaeria maculans	44.08	1.00e-58	219.00
IUUC-Laf-054053	Loxodonta africana	49.49	1.00e-79	289.00
IUUC-Mcc-054652	Macaca mulatta	47.23	5.00e-76	277.00
IUUC-Mor-057256	Magnaporthe oryzae	35.45	5.00e-53	201.00
IUUC-Mpo-057303	Magnaporthe poae	35.91	2.00e-54	205.00
IUUC-Mga-059664	Meleagris gallopavo	48.64	1.00e-76	279.00
IUUC-Mvi-060534	Microbotryum violaceum	34.87	8.00e-36	144.00
IUUC-Mmr-061044	Microcebus murinus	49.49	4.00e-79	287.00
IUUC-Mdo-063019	Monodelphis domestica	48.81	1.00e-77	282.00
IUUC-Mmu-064092	Mus musculus	49.49	5.00e-79	287.00
IUUC-Mpu-066557	Mustela putorius furo	49.49	2.00e-79	288.00
IUUC-Mlu-068179	Myotis lucifugus	49.49	9.00e-80	290.00
IUUC-Nle-069482	Nomascus leucogenys	47.06	2.00e-75	275.00
IUUC-Opr-071055	Ochotona princeps	38.57	9.00e-48	183.00
IUUC-Ont-072663	Oreochromis niloticus	47.87	9.00e-72	263.00
IUUC-Ocu-074942	Oryctolagus cuniculus	49.49	3.00e-79	288.00
IUUC-Obr-076414	Oryza brachyantha	77.27	3.00e-157	547.00
IUUC-Ogl-077624	Oryza glaberrima	76.29	8.00e-156	542.00
IUUC-Oin-079631	Oryza indica	77.20	2.00e-157	548.00
IUUC-Ome-081693	Oryza meridionalis	77.51	2.00e-156	544.00
IUUC-Oni-082741	Oryza nivara	77.20	2.00e-157	548.00
IUUC-Oru-084809	Oryza rufipogon	77.20	2.00e-157	548.00
IUUC-Osa-086053	Oryza sativa	77.20	2.00e-157	548.00
IUUC-Ola-086704	Oryzias latipes	50.00	2.00e-78	285.00
IUUC-Olu-087796	Ostreococcus lucimarinus	57.34	1.00e-103	368.00
IUUC-Oga-088932	Otolemur garnettii	43.01	1.00e-53	202.00
IUUC-Oar-090398	Ovis aries	49.49	3.00e-79	288.00
IUUC-Ptr-091202	Pan troglodytes	49.49	4.00e-79	287.00
IUUC-Pan-091948	Papio anubis	49.49	3.00e-79	288.00
IUUC-Psi-093863	Pelodiscus sinensis	46.27	1.00e-65	243.00
IUUC-Pma-094255	Petromyzon marinus	47.26	8.00e-74	270.00
IUUC-Pno-095075	Phaeosphaeria nodorum	45.54	4.00e-61	227.00
IUUC-Pfo-096438	Poecilia formosa	50.34	4.00e-81	294.00
IUUC-Pab-097994	Pongo abelii	49.49	4.00e-79	287.00
IUUC-Pop-099172	Populus trichocarpa	79.34	5.00e-165	573.00
IUUC-Pca-100761	Procavia capensis	45.39	1.00e-68	253.00
IUUC-Pva-102794	Pteropus vampyrus	45.73	4.00e-69	254.00
IUUC-Pte-104245	Pyrenophora teres	44.55	6.00e-62	230.00
IUUC-Pyt-104537	Pyrenophora triticirepentis	44.55	6.00e-62	230.00
IUUC-Rno-105712	Rattus norvegicus	49.49	4.00e-79	287.00
IUUC-Sha-107568	Sarcophilus harrisii	48.81	2.00e-77	282.00
IUUC-Ssl-108655	Sclerotinia sclerotiorum	37.16	8.00e-56	210.00
IUUC-Sly-111555	Solanum lycopersicum	77.74	4.00e-159	553.00
IUUC-Stu-111953	Solanum tuberosum	77.74	6.00e-159	553.00
IUUC-Sar-113491	Sorex araneus	41.49	3.00e-41	161.00
IUUC-Sre-115008	Sporisorium reilianum	41.64	2.00e-60	225.00
IUUC-Ssc-116392	Sus scrofa	47.06	3.00e-75	275.00
IUUC-Tgu-116835	Taeniopygia guttata	46.18	5.00e-63	234.00
IUUC-Tru-117558	Takifugu rubripes	49.66	2.00e-78	285.00
IUUC-Tsy-119522	Tarsius syrichta	47.78	3.00e-71	261.00
IUUC-Tni-120330	Tetraodon nigroviridis	50.17	2.00e-76	278.00
IUUC-Tca-121867	Theobroma cacao	83.44	4.00e-167	580.00
IUUC-Tre-122163	Trichoderma reesei	38.58	2.00e-48	186.00
IUUC-Tvi-122609	Trichoderma virens	39.20	7.00e-55	207.00
IUUC-Tae-123053	Triticum aestivum	77.44	1.00e-157	548.00
IUUC-Ttr-128202	Tursiops truncatus	49.49	4.00e-79	287.00
IUUC-Uma-129433	Ustilago maydis	43.46	3.00e-61	228.00
IUUC-Vda-129675	Verticillium dahliae	38.84	6.00e-54	204.00
IUUC-Vpa-130382	Vicugna pacos	49.49	3.00e-79	288.00
IUUC-Vvi-130921	Vitis vinifera	83.61	2.00e-160	558.00
IUUC-Xtr-132648	Xenopus tropicalis	48.62	4.00e-72	264.00
IUUC-Xma-133969	Xiphophorus maculatus	46.58	1.00e-71	263.00
IUUC-Yli-134670	Yarrowia lipolytica	38.44	7.00e-52	197.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence