iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gma-043185

Ensembl Protein ID

GLYMA08G47440.1

UniProt Accession

I1KZF2; I1KZF2_SOYBN

Genbank Protein ID

KRH46832.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000841

Gene Name

LOC100798946; GLYMA_08G359600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA08G47440	GLYMA08G47440.1	GLYMA08G47440.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-29	101.2	555	586
UBD/Beta-Prp	5.80e-46	158.7	153	374

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHtd++t+l+f  d + l+s+s Dg++++WD+
   Q: 555  GHTDRITDLCFsEDgKWLLSSSMDGSLRIWDV 586
           8**********955699**************6 PP

UBD/Beta-Prp

   S: 66   ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslD 158
             + gse +  ++w++st k +  +kg ++ + ++ +sp  d++++G  d  i+v +++ +++l ++   ++g+v+ ++++ dg  ll+sG+  
   Q: 153  KVLVGSEQGPMQLWNISTKKKIFEFKGWNSPISCCVSSPALDVVAIGCTDGRIHVHNIRYDEELVTFTHSTRGSVTALSFSTDGqPLLASGGSS 246
           567899999999***************************99************************88888999***********99******** PP
   S: 159  rtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
           +++ +W+l+ ++l    +++h++ ++sl f  n + l+s s d+++k+w +       + +r   gh++++++++f  n+ +++s+++D+  r+
   Q: 247  GVISIWNLEKKRLQSVVREAHDSVITSLHFFANEPVLMSSSADNSIKMWIFDtsdgDPRLLRFRSGHSAPPLCIKFYANGRHILSAGQDRAFRL 340
           *****************999*****************************88855555566999999**************************** PP
   S: 249  Wdlrsgdllktlqlhn.................s 265
           + + +++  + l++++                 +
   Q: 341  FSVVQDQQSRELSQRHvskrakklklkeeeiklK 374
           9999999988888888555555555555444444 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGIFEPYRAI GCITSSVPFS VQRLGTETFL TVSVGKAFQV FNCAKLNLVL VGPQLPKKIS 60
ALASYREYTF AAYGNNIAVF KRAHQVATWS SHNAKVKLLL LFGDHIVSVD ARGNMFLWPF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTGTTTTC ATTCTGAACT AATAACTAGG TAAAGTAAAA CCCTAGCGCC AAAACCCTGA 60
CTGAATACGG AGAGGACAAG AGAAGAAGCA GGGCAGAGTA GGCGCCGAGG TGGGAGTGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

gmx:100798946

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	71.03	0.00e+00	1284.00
IUUC-Aml-002289	Ailuropoda melanoleuca	35.30	9.00e-151	527.00
IUUC-Apl-003505	Anas platyrhynchos	38.62	1.00e-145	510.00
IUUC-Aca-004339	Anolis carolinensis	35.78	7.00e-150	524.00
IUUC-Aly-005913	Arabidopsis lyrata	74.40	0.00e+00	1359.00
IUUC-Ath-006767	Arabidopsis thaliana	72.84	0.00e+00	1347.00
IUUC-Ame-010963	Astyanax mexicanus	36.32	6.00e-151	528.00
IUUC-Bta-012462	Bos taurus	36.10	3.00e-153	536.00
IUUC-Bol-016534	Brassica oleracea	74.53	0.00e+00	1365.00
IUUC-Bra-016781	Brassica rapa	71.79	0.00e+00	1321.00
IUUC-Cel-018581	Caenorhabditis elegans	28.00	3.00e-87	316.00
IUUC-Cpo-021798	Cavia porcellus	37.01	5.00e-153	535.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	32.71	7.00e-46	178.00
IUUC-Dre-027733	Danio rerio	35.47	4.00e-147	515.00
IUUC-Dno-029439	Dasypus novemcinctus	37.35	3.00e-147	515.00
IUUC-Ete-032930	Echinops telfairi	40.21	9.00e-114	404.00
IUUC-Eca-033302	Equus caballus	35.60	4.00e-149	522.00
IUUC-Eeu-034516	Erinaceus europaeus	35.27	1.00e-158	554.00
IUUC-Fca-036064	Felis catus	37.06	9.00e-149	521.00
IUUC-Fal-037024	Ficedula albicollis	37.43	3.00e-158	552.00
IUUC-Gmo-039637	Gadus morhua	36.36	4.00e-82	298.00
IUUC-Gga-040982	Gallus gallus	36.26	7.00e-166	577.00
IUUC-Gac-041565	Gasterosteus aculeatus	34.57	3.00e-137	482.00
IUUC-Hvu-047352	Hordeum vulgare	71.06	0.00e+00	1190.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	35.15	3.00e-160	559.00
IUUC-Lch-050476	Latimeria chalumnae	35.45	2.00e-160	560.00
IUUC-Loc-052820	Lepisosteus oculatus	36.13	4.00e-156	545.00
IUUC-Mga-059598	Meleagris gallopavo	32.78	2.00e-117	416.00
IUUC-Mdo-062471	Monodelphis domestica	36.09	4.00e-150	525.00
IUUC-Mlu-067485	Myotis lucifugus	35.37	2.00e-147	516.00
IUUC-Opr-070437	Ochotona princeps	39.34	1.00e-43	171.00
IUUC-Ont-071574	Oreochromis niloticus	35.04	6.00e-146	511.00
IUUC-Oan-072826	Ornithorhynchus anatinus	37.28	1.00e-161	563.00
IUUC-Ocu-073995	Oryctolagus cuniculus	36.81	5.00e-146	511.00
IUUC-Ogu-077995	Oryza glumaepatula	65.04	0.00e+00	1135.00
IUUC-Oru-084500	Oryza rufipogon	64.93	0.00e+00	1126.00
IUUC-Ola-086612	Oryzias latipes	34.02	1.00e-112	400.00
IUUC-Oga-088572	Otolemur garnettii	35.55	1.00e-150	527.00
IUUC-Oar-090363	Ovis aries	36.58	2.00e-155	543.00
IUUC-Psi-093019	Pelodiscus sinensis	35.22	2.00e-148	519.00
IUUC-Pma-094303	Petromyzon marinus	34.98	1.00e-126	447.00
IUUC-Pfo-097034	Poecilia formosa	34.87	9.00e-138	484.00
IUUC-Pop-098835	Populus trichocarpa	77.01	0.00e+00	1407.00
IUUC-Pca-101097	Procavia capensis	37.25	2.00e-60	228.00
IUUC-Ppe-101430	Prunus persica	79.38	0.00e+00	1469.00
IUUC-Sha-107272	Sarcophilus harrisii	37.17	2.00e-144	506.00
IUUC-Sly-111181	Solanum lycopersicum	75.41	0.00e+00	1363.00
IUUC-Stu-112018	Solanum tuberosum	75.96	0.00e+00	1366.00
IUUC-Sar-113348	Sorex araneus	35.21	2.00e-102	367.00
IUUC-Ssc-115287	Sus scrofa	36.07	5.00e-154	538.00
IUUC-Tgu-117138	Taeniopygia guttata	35.65	6.00e-128	451.00
IUUC-Tsy-119502	Tarsius syrichta	28.71	1.00e-101	364.00
IUUC-Tni-120378	Tetraodon nigroviridis	36.99	5.00e-143	501.00
IUUC-Tae-122836	Triticum aestivum	70.99	0.00e+00	1350.00
IUUC-Tur-126490	Triticum urartu	62.99	0.00e+00	1048.00
IUUC-Ttr-128886	Tursiops truncatus	35.23	7.00e-148	518.00
IUUC-Vpa-130456	Vicugna pacos	35.49	2.00e-151	529.00
IUUC-Xtr-131829	Xenopus tropicalis	37.30	2.00e-169	590.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence