iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129981

Ensembl Protein ID

EGY19205

UniProt Accession

G2XHA7; G2XHA7_VERDV

Genbank Protein ID

EGY19205.1

Protein Name

WD repeat-containing protein

Genbank Nucleotide ID

DS572720

Gene Name

VDAG_09539

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_09539	EGY19205	EGY19205

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-13	48.2	432	460

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sdtllvsGsdDgtikvWDlrt 32
           sv+  ++ + ++l+++s+D tik++D++t
   Q: 432  SVSHASWsPAGHLATSSYDDTIKIYDFTT 460
           46677895449***************998 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MPVTRRSTGR TEVKAKPQYK EESDSETDEL TRDEAAPEPE SPPVPVKKEA PATMSAFEKR 60
RLENIAANQA LLKDISATAS KILPASKPTP TRASKPSKRS KDAPVKREPA MATRRSSRVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCGTCA CCAGGAGATC GACGGGGAGA ACAGAGGTGA AAGCAAAACC ACAATACAAG 60
GAGGAATCAG ATTCAGAAAC CGACGAGCTT ACCCGAGATG AGGCGGCACC TGAACCCGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR033052--Cmr1/WDR76
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0006974--P:cellular response to DNA damage stimulus

KEGG

vda:VDAG_09539

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000625	Aegilops tauschii	30.70	3.00e-18	84.00
IUUC-Aml-002203	Ailuropoda melanoleuca	29.65	2.00e-10	58.50
IUUC-Atr-003079	Amborella trichopoda	27.85	1.00e-28	119.00
IUUC-Apl-003441	Anas platyrhynchos	24.38	4.00e-25	107.00
IUUC-Aca-004241	Anolis carolinensis	25.62	3.00e-35	140.00
IUUC-Aly-005444	Arabidopsis lyrata	27.75	6.00e-32	130.00
IUUC-Ath-007550	Arabidopsis thaliana	27.46	6.00e-29	120.00
IUUC-Ago-007715	Ashbya gossypii	31.33	2.00e-57	214.00
IUUC-Acl-008370	Aspergillus clavatus	48.87	2.00e-133	467.00
IUUC-Afl-008586	Aspergillus flavus	50.86	1.00e-136	478.00
IUUC-Afu-008907	Aspergillus fumigatus	47.82	2.00e-129	453.00
IUUC-Ani-009415	Aspergillus nidulans	49.81	1.00e-132	464.00
IUUC-Ang-009597	Aspergillus niger	41.10	4.00e-73	266.00
IUUC-Aor-010197	Aspergillus oryzae	50.67	3.00e-136	476.00
IUUC-Ate-010280	Aspergillus terreus	49.06	4.00e-137	479.00
IUUC-Ame-010817	Astyanax mexicanus	23.76	4.00e-08	51.20
IUUC-Bgr-012236	Blumeria graminis	54.89	7.00e-155	538.00
IUUC-Bta-013059	Bos taurus	26.33	5.00e-29	120.00
IUUC-Bci-013796	Botrytis cinerea	61.26	5.00e-178	615.00
IUUC-Bdi-015040	Brachypodium distachyon	29.88	6.00e-27	113.00
IUUC-Bol-015934	Brassica oleracea	27.08	6.00e-24	103.00
IUUC-Bra-018032	Brassica rapa	27.17	9.00e-28	116.00
IUUC-Cja-019043	Callithrix jacchus	25.41	6.00e-31	127.00
IUUC-Cfa-021103	Canis familiaris	26.32	4.00e-30	124.00
IUUC-Cpo-021508	Cavia porcellus	27.17	6.00e-28	117.00
IUUC-Cre-022967	Chlamydomonas reinhardtii	24.67	9.00e-12	63.50
IUUC-Csa-023555	Chlorocebus sabaeus	25.96	2.00e-31	128.00
IUUC-Cho-024931	Choloepus hoffmanni	23.33	2.00e-07	48.90
IUUC-Cin-025651	Ciona intestinalis	26.00	2.00e-29	122.00
IUUC-Cgl-026604	Colletotrichum gloeosporioides	60.62	3.00e-168	583.00
IUUC-Cne-027093	Cryptococcus neoformans	25.24	2.00e-32	131.00
IUUC-Cme-027238	Cyanidioschyzon merolae	25.75	9.00e-24	103.00
IUUC-Dre-027441	Danio rerio	24.20	8.00e-28	116.00
IUUC-Dno-029575	Dasypus novemcinctus	25.40	1.00e-29	122.00
IUUC-Dor-030554	Dipodomys ordii	24.13	4.00e-33	134.00
IUUC-Dse-031299	Dothistroma septosporum	51.05	1.00e-145	507.00
IUUC-Ete-032716	Echinops telfairi	25.11	2.00e-14	72.40
IUUC-Eca-034027	Equus caballus	26.69	2.00e-18	85.90
IUUC-Eeu-035234	Erinaceus europaeus	26.95	3.00e-12	65.10
IUUC-Fca-035892	Felis catus	23.55	3.00e-30	124.00
IUUC-Fal-036986	Ficedula albicollis	25.47	2.00e-21	94.70
IUUC-Fox-037750	Fusarium oxysporum	64.35	0.00e+00	650.00
IUUC-Fso-038198	Fusarium solani	63.13	7.00e-176	608.00
IUUC-Gmo-039683	Gadus morhua	25.54	1.00e-10	58.90
IUUC-Gga-040479	Gallus gallus	25.74	3.00e-18	84.30
IUUC-Gac-042043	Gasterosteus aculeatus	27.25	6.00e-28	116.00
IUUC-Gma-042915	Glycine max	25.77	3.00e-37	147.00
IUUC-Ggo-045290	Gorilla gorilla	25.54	8.00e-31	126.00
IUUC-Hsa-047021	Homo sapiens	25.54	2.00e-30	125.00
IUUC-Hvu-047193	Hordeum vulgare	28.53	1.00e-26	112.00
IUUC-Itr-047914	Ictidomys tridecemlineatus	26.50	8.00e-31	126.00
IUUC-Kpa-049275	Komagataella pastoris	33.09	3.00e-75	274.00
IUUC-Lch-049718	Latimeria chalumnae	26.49	1.00e-32	133.00
IUUC-Lpe-051708	Leersia perrieri	28.37	9.00e-27	112.00
IUUC-Loc-052565	Lepisosteus oculatus	24.67	8.00e-35	139.00
IUUC-Lma-053276	Leptosphaeria maculans	53.58	3.00e-150	523.00
IUUC-Laf-053970	Loxodonta africana	29.24	1.00e-33	135.00
IUUC-Mcc-054740	Macaca mulatta	25.68	4.00e-31	127.00
IUUC-Meu-056546	Macropus eugenii	26.38	9.00e-13	66.60
IUUC-Mtr-058451	Medicago truncatula	28.11	6.00e-41	159.00
IUUC-Mla-059117	Melampsora laricipopulina	29.05	4.00e-55	207.00
IUUC-Mga-059328	Meleagris gallopavo	25.75	2.00e-25	108.00
IUUC-Mvi-060555	Microbotryum violaceum	31.08	1.00e-39	155.00
IUUC-Mmr-061520	Microcebus murinus	25.90	2.00e-35	142.00
IUUC-Mdo-062812	Monodelphis domestica	26.15	5.00e-37	147.00
IUUC-Mmu-064011	Mus musculus	25.14	1.00e-26	112.00
IUUC-Mac-065598	Musa acuminata	21.70	1.00e-14	72.80
IUUC-Mpu-066486	Mustela putorius furo	26.30	7.00e-29	120.00
IUUC-Mlu-067721	Myotis lucifugus	25.28	1.00e-18	85.90
IUUC-Nfi-068314	Neosartorya fischeri	47.82	2.00e-129	453.00
IUUC-Ncr-068896	Neurospora crassa	64.75	7.00e-180	621.00
IUUC-Nle-069369	Nomascus leucogenys	25.82	2.00e-30	125.00
IUUC-Opr-070975	Ochotona princeps	26.02	3.00e-28	118.00
IUUC-Ont-072528	Oreochromis niloticus	24.86	2.00e-30	125.00
IUUC-Oan-072955	Ornithorhynchus anatinus	25.36	1.00e-24	105.00
IUUC-Ocu-074561	Oryctolagus cuniculus	26.23	2.00e-26	112.00
IUUC-Oba-074982	Oryza barthii	27.42	1.00e-29	122.00
IUUC-Obr-076551	Oryza brachyantha	29.93	2.00e-23	100.00
IUUC-Ogl-077685	Oryza glaberrima	28.49	1.00e-29	122.00
IUUC-Ogu-078331	Oryza glumaepatula	28.49	7.00e-30	123.00
IUUC-Oin-079507	Oryza indica	28.29	4.00e-28	117.00
IUUC-Olo-080604	Oryza longistaminata	28.92	2.00e-25	108.00
IUUC-Ome-081816	Oryza meridionalis	28.69	1.00e-27	115.00
IUUC-Oni-082051	Oryza nivara	28.49	9.00e-30	122.00
IUUC-Opu-083372	Oryza punctata	27.35	5.00e-29	120.00
IUUC-Oru-084578	Oryza rufipogon	28.49	7.00e-30	123.00
IUUC-Osa-086177	Oryza sativa	28.49	7.00e-30	123.00
IUUC-Ola-087208	Oryzias latipes	28.74	2.00e-28	118.00
IUUC-Olu-087680	Ostreococcus lucimarinus	25.24	2.00e-25	108.00
IUUC-Oga-088104	Otolemur garnettii	27.52	9.00e-34	136.00
IUUC-Oar-090157	Ovis aries	26.26	5.00e-29	120.00
IUUC-Ptr-091615	Pan troglodytes	25.82	1.00e-30	125.00
IUUC-Pan-092212	Papio anubis	25.68	4.00e-31	127.00
IUUC-Psi-092950	Pelodiscus sinensis	26.22	3.00e-30	124.00
IUUC-Pma-094474	Petromyzon marinus	25.89	3.00e-09	54.30
IUUC-Pno-094824	Phaeosphaeria nodorum	55.41	1.00e-160	558.00
IUUC-Ppa-095414	Physcomitrella patens	24.19	1.00e-21	96.30
IUUC-Pfo-096922	Poecilia formosa	26.54	3.00e-35	141.00
IUUC-Pab-097591	Pongo abelii	25.54	6.00e-31	127.00
IUUC-Pop-099337	Populus trichocarpa	26.55	1.00e-37	149.00
IUUC-Pca-101025	Procavia capensis	26.53	1.00e-29	123.00
IUUC-Ppe-101256	Prunus persica	24.43	4.00e-24	103.00
IUUC-Pva-102453	Pteropus vampyrus	26.98	1.00e-30	126.00
IUUC-Pgr-103436	Puccinia graminis	35.52	5.00e-40	157.00
IUUC-Ptt-103899	Puccinia triticina	36.71	4.00e-43	167.00
IUUC-Pte-104258	Pyrenophora teres	53.56	4.00e-151	526.00
IUUC-Pyt-104625	Pyrenophora triticirepentis	54.04	2.00e-151	526.00
IUUC-Rno-104843	Rattus norvegicus	24.86	2.00e-25	108.00
IUUC-Sce-106189	Saccharomyces cerevisiae	30.43	7.00e-54	202.00
IUUC-Sha-106672	Sarcophilus harrisii	25.62	2.00e-36	145.00
IUUC-Smo-109660	Selaginella moellendorffii	27.89	4.00e-27	113.00
IUUC-Sit-109704	Setaria italica	29.66	1.00e-36	145.00
IUUC-Sly-111853	Solanum lycopersicum	23.06	2.00e-26	111.00
IUUC-Stu-112482	Solanum tuberosum	24.29	6.00e-27	113.00
IUUC-Sbi-114517	Sorghum bicolor	29.47	7.00e-28	116.00
IUUC-Sre-114960	Sporisorium reilianum	25.85	2.00e-31	128.00
IUUC-Ssc-115568	Sus scrofa	25.54	7.00e-29	120.00
IUUC-Tgu-117276	Taeniopygia guttata	23.17	2.00e-16	78.20
IUUC-Tru-117559	Takifugu rubripes	35.63	1.00e-08	49.70
IUUC-Tsy-119234	Tarsius syrichta	32.95	2.00e-10	59.30
IUUC-Tni-120358	Tetraodon nigroviridis	26.15	8.00e-31	126.00
IUUC-Tca-121273	Theobroma cacao	23.32	9.00e-29	119.00
IUUC-Tre-121932	Trichoderma reesei	64.06	0.00e+00	633.00
IUUC-Tvi-122567	Trichoderma virens	64.06	0.00e+00	659.00
IUUC-Tae-123506	Triticum aestivum	28.25	5.00e-26	110.00
IUUC-Tur-125970	Triticum urartu	29.39	6.00e-17	79.70
IUUC-Tme-126958	Tuber melanosporum	42.05	2.00e-93	334.00
IUUC-Tbe-127425	Tupaia belangeri	26.93	8.00e-31	126.00
IUUC-Ttr-129123	Tursiops truncatus	25.94	5.00e-26	110.00
IUUC-Uma-129495	Ustilago maydis	29.07	1.00e-27	116.00
IUUC-Vpa-130437	Vicugna pacos	25.89	4.00e-29	121.00
IUUC-Vvi-131430	Vitis vinifera	25.72	4.00e-28	117.00
IUUC-Xtr-132670	Xenopus tropicalis	25.14	6.00e-34	137.00
IUUC-Xma-133375	Xiphophorus maculatus	26.40	3.00e-29	121.00
IUUC-Yli-134341	Yarrowia lipolytica	34.92	6.00e-81	293.00
IUUC-Zma-135413	Zea mays	29.75	3.00e-35	140.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence