iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aml-001865

Ensembl Protein ID

ENSAMEP00000005469.1

UniProt Accession

G1LEY2; G1LEY2_AILME

Genbank Protein ID

ENSAMEP00000005469

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01036251

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000005150.1	ENSAMET00000005694.1	ENSAMEP00000005469.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.70e-16	58.1	144	179

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+c+++ +d + l s+sdD+ i  W++ t++
   Q: 144  GHDNKVNCIQWhQDnGCLYSCSDDKHIVEWNTQTCK 179
           8***********77799*********9866665554 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

PHGGAHAHRR TRGCRGARAA MAAGGGGVAD PLSPAGVPCA FSPLNQAYFA LASADGQLRV 60
WETANNRLHQ EYVPSAHLSG TCTCLAWAPA RLQAKESPQR KKRKSEAIGT SNQIDLLALG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCACGGCG GTGCGCATGC GCACAGGCGA ACACGTGGCT GCCGCGGAGC CAGGGCAGCA 60
ATGGCGGCGG GTGGAGGTGG TGTTGCCGAC CCCCTGTCCC CGGCAGGGGT TCCTTGCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002533	Amborella trichopoda	20.87	3.00e-24	106.00
IUUC-Apl-003242	Anas platyrhynchos	74.19	0.00e+00	807.00
IUUC-Aca-004607	Anolis carolinensis	70.92	0.00e+00	859.00
IUUC-Aly-006074	Arabidopsis lyrata	25.09	4.00e-16	79.70
IUUC-Ath-007222	Arabidopsis thaliana	25.09	9.00e-16	78.60
IUUC-Ame-011014	Astyanax mexicanus	54.10	3.00e-171	595.00
IUUC-Bta-012605	Bos taurus	94.43	0.00e+00	1128.00
IUUC-Bdi-014072	Brachypodium distachyon	20.41	3.00e-19	90.10
IUUC-Bol-016255	Brassica oleracea	26.94	2.00e-22	101.00
IUUC-Bra-016850	Brassica rapa	27.61	5.00e-24	105.00
IUUC-Cja-019620	Callithrix jacchus	93.24	0.00e+00	1107.00
IUUC-Cfa-020520	Canis familiaris	97.80	0.00e+00	1164.00
IUUC-Cpo-022456	Cavia porcellus	84.67	0.00e+00	1066.00
IUUC-Cho-024726	Choloepus hoffmanni	88.66	0.00e+00	1095.00
IUUC-Cin-025761	Ciona intestinalis	36.15	2.00e-98	353.00
IUUC-Dre-028051	Danio rerio	52.91	7.00e-178	617.00
IUUC-Dno-030031	Dasypus novemcinctus	91.80	0.00e+00	1132.00
IUUC-Dme-031653	Drosophila melanogaster	27.05	5.00e-45	175.00
IUUC-Ete-032863	Echinops telfairi	82.69	1.00e-97	350.00
IUUC-Eca-033243	Equus caballus	96.30	0.00e+00	990.00
IUUC-Eeu-034970	Erinaceus europaeus	88.33	0.00e+00	803.00
IUUC-Fca-036009	Felis catus	97.12	0.00e+00	1153.00
IUUC-Fal-037264	Ficedula albicollis	72.05	0.00e+00	781.00
IUUC-Gmo-039124	Gadus morhua	55.67	2.00e-177	615.00
IUUC-Gga-040862	Gallus gallus	72.70	0.00e+00	860.00
IUUC-Gac-041468	Gasterosteus aculeatus	54.31	0.00e+00	638.00
IUUC-Gma-042795	Glycine max	22.75	3.00e-13	70.10
IUUC-Ggo-044432	Gorilla gorilla	93.91	0.00e+00	1115.00
IUUC-Hsa-047036	Homo sapiens	91.21	0.00e+00	1130.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	92.37	0.00e+00	1098.00
IUUC-Lch-049553	Latimeria chalumnae	66.32	0.00e+00	758.00
IUUC-Laf-053462	Loxodonta africana	91.88	0.00e+00	1142.00
IUUC-Mcc-055239	Macaca mulatta	93.58	0.00e+00	1112.00
IUUC-Mtr-057977	Medicago truncatula	21.45	1.00e-18	87.80
IUUC-Mga-060079	Meleagris gallopavo	74.00	0.00e+00	790.00
IUUC-Mmr-061472	Microcebus murinus	92.22	0.00e+00	1105.00
IUUC-Mdo-061972	Monodelphis domestica	78.14	0.00e+00	1009.00
IUUC-Mmu-063354	Mus musculus	84.93	0.00e+00	1045.00
IUUC-Mac-065064	Musa acuminata	24.00	4.00e-18	85.90
IUUC-Mpu-066877	Mustela putorius furo	97.13	0.00e+00	1159.00
IUUC-Mlu-067476	Myotis lucifugus	91.39	0.00e+00	1078.00
IUUC-Nle-069119	Nomascus leucogenys	93.57	0.00e+00	1111.00
IUUC-Ont-072093	Oreochromis niloticus	55.44	0.00e+00	674.00
IUUC-Oan-072944	Ornithorhynchus anatinus	72.74	0.00e+00	867.00
IUUC-Ocu-074472	Oryctolagus cuniculus	92.05	0.00e+00	1059.00
IUUC-Oba-075009	Oryza barthii	20.99	2.00e-15	77.40
IUUC-Ogl-077189	Oryza glaberrima	20.17	5.00e-15	76.30
IUUC-Oin-079064	Oryza indica	21.45	3.00e-15	76.60
IUUC-Opu-083604	Oryza punctata	20.87	3.00e-14	73.60
IUUC-Oru-084620	Oryza rufipogon	21.45	3.00e-15	77.00
IUUC-Osa-085345	Oryza sativa	21.45	1.00e-15	77.80
IUUC-Ola-086626	Oryzias latipes	54.44	0.00e+00	657.00
IUUC-Oga-087911	Otolemur garnettii	91.69	0.00e+00	1097.00
IUUC-Ptr-091603	Pan troglodytes	90.91	0.00e+00	1127.00
IUUC-Pan-092569	Papio anubis	93.58	0.00e+00	1112.00
IUUC-Pma-094287	Petromyzon marinus	52.93	0.00e+00	640.00
IUUC-Ppa-095327	Physcomitrella patens	25.57	7.00e-38	152.00
IUUC-Pfo-097292	Poecilia formosa	54.52	0.00e+00	638.00
IUUC-Pab-097878	Pongo abelii	92.74	0.00e+00	1117.00
IUUC-Pop-099418	Populus trichocarpa	22.66	6.00e-21	95.90
IUUC-Pca-100941	Procavia capensis	86.14	0.00e+00	1013.00
IUUC-Ppe-101779	Prunus persica	20.36	1.00e-21	97.80
IUUC-Pva-102493	Pteropus vampyrus	87.12	0.00e+00	1041.00
IUUC-Rno-105084	Rattus norvegicus	88.47	0.00e+00	1030.00
IUUC-Sha-107486	Sarcophilus harrisii	81.45	0.00e+00	988.00
IUUC-Smo-108825	Selaginella moellendorffii	22.71	7.00e-22	99.00
IUUC-Sit-110825	Setaria italica	21.12	2.00e-19	90.50
IUUC-Sly-111365	Solanum lycopersicum	23.37	1.00e-21	98.20
IUUC-Stu-112812	Solanum tuberosum	23.97	1.00e-20	94.40
IUUC-Sar-113326	Sorex araneus	93.31	9.00e-146	510.00
IUUC-Sbi-114426	Sorghum bicolor	21.64	2.00e-22	100.00
IUUC-Tgu-116726	Taeniopygia guttata	69.63	0.00e+00	843.00
IUUC-Tru-117848	Takifugu rubripes	54.78	0.00e+00	635.00
IUUC-Tsy-119091	Tarsius syrichta	64.68	1.00e-134	473.00
IUUC-Tni-120591	Tetraodon nigroviridis	54.99	0.00e+00	637.00
IUUC-Tca-121576	Theobroma cacao	21.17	1.00e-20	94.70
IUUC-Tae-125648	Triticum aestivum	20.51	5.00e-17	82.80
IUUC-Tbe-127832	Tupaia belangeri	93.32	0.00e+00	974.00
IUUC-Ttr-128812	Tursiops truncatus	95.42	0.00e+00	1003.00
IUUC-Xma-133557	Xiphophorus maculatus	54.67	0.00e+00	640.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence