iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000015967.1	ENSSHAT00000018968.1	ENSSHAP00000018813.1
ENSSHAG00000015967.1	ENSSHAT00000018969.1	ENSSHAP00000018814.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-10	40.4	2910	2947

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H + + ++a+ ++  ++ +Gs  g+ikvW+l+ + l++
   Q: 2910 HDSAIKAMALdPCeEYFTTGSAEGNIKVWRLTGHGLIH 2947
           99999*****9888****************98776665 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

AYGSGCDIVI LANDFECVQI IPGAKHGNIQ VSCVECSNQH GRIAASYGNA VCIFEPLGIN 60
SHKRNCQIKC QWLKTGQFFL SSVTYNLAWD PQGNRLLTAT DLVQLWAPPE SDILEEEEEI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCATATGGAT CAGGCTGTGA TATTGTTATT TTGGCCAATG ACTTCGAATG TGTGCAGATC 60
ATCCCTGGTG CTAAACATGG AAACATCCAA GTCAGCTGTG TGGAGTGCTC CAACCAGCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR022033--Rav1p_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12234--Rav1p_C
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005615--C:extracellular space
GO:0008021--C:synaptic vesicle

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001296	Ailuropoda melanoleuca	83.49	0.00e+00	4998.00
IUUC-Apl-003695	Anas platyrhynchos	79.37	0.00e+00	4704.00
IUUC-Aca-004516	Anolis carolinensis	77.60	0.00e+00	4526.00
IUUC-Aly-006404	Arabidopsis lyrata	33.19	4.00e-31	131.00
IUUC-Afu-009077	Aspergillus fumigatus	31.33	7.00e-38	152.00
IUUC-Ani-009437	Aspergillus nidulans	28.63	2.00e-43	171.00
IUUC-Ang-009742	Aspergillus niger	29.98	7.00e-39	156.00
IUUC-Bdi-014471	Brachypodium distachyon	26.28	1.00e-17	85.10
IUUC-Bol-016375	Brassica oleracea	28.85	8.00e-30	127.00
IUUC-Cel-018537	Caenorhabditis elegans	30.91	0.00e+00	845.00
IUUC-Cja-018770	Callithrix jacchus	83.46	0.00e+00	5018.00
IUUC-Cfa-021089	Canis familiaris	84.33	0.00e+00	5009.00
IUUC-Cpo-022459	Cavia porcellus	79.95	0.00e+00	4434.00
IUUC-Csa-023972	Chlorocebus sabaeus	84.29	0.00e+00	5045.00
IUUC-Cho-024762	Choloepus hoffmanni	82.62	0.00e+00	2100.00
IUUC-Dre-028673	Danio rerio	67.94	0.00e+00	3999.00
IUUC-Dno-029855	Dasypus novemcinctus	81.34	0.00e+00	4799.00
IUUC-Dor-030221	Dipodomys ordii	82.01	0.00e+00	1800.00
IUUC-Dme-031825	Drosophila melanogaster	39.34	0.00e+00	1161.00
IUUC-Ete-033176	Echinops telfairi	80.15	0.00e+00	2586.00
IUUC-Eca-033386	Equus caballus	83.45	0.00e+00	4997.00
IUUC-Fal-036643	Ficedula albicollis	79.13	0.00e+00	4556.00
IUUC-Gmo-038514	Gadus morhua	67.02	0.00e+00	2178.00
IUUC-Gga-040765	Gallus gallus	79.73	0.00e+00	4699.00
IUUC-Gac-042017	Gasterosteus aculeatus	65.71	0.00e+00	3816.00
IUUC-Gma-044099	Glycine max	34.87	1.00e-35	146.00
IUUC-Ggo-045379	Gorilla gorilla	82.07	0.00e+00	4121.00
IUUC-Hsa-046758	Homo sapiens	83.89	0.00e+00	5038.00
IUUC-Hvu-047213	Hordeum vulgare	25.88	5.00e-16	77.80
IUUC-Itr-047982	Ictidomys tridecemlineatus	83.92	0.00e+00	4954.00
IUUC-Lch-049469	Latimeria chalumnae	71.28	0.00e+00	4046.00
IUUC-Loc-052786	Lepisosteus oculatus	70.97	0.00e+00	4139.00
IUUC-Laf-054102	Loxodonta africana	82.30	0.00e+00	4921.00
IUUC-Mcc-055533	Macaca mulatta	83.86	0.00e+00	5015.00
IUUC-Meu-056132	Macropus eugenii	88.16	0.00e+00	1359.00
IUUC-Mga-059386	Meleagris gallopavo	79.53	0.00e+00	4700.00
IUUC-Mmr-061082	Microcebus murinus	83.56	0.00e+00	4985.00
IUUC-Mdo-062837	Monodelphis domestica	88.11	0.00e+00	5122.00
IUUC-Mmu-063696	Mus musculus	82.25	0.00e+00	4846.00
IUUC-Mac-065224	Musa acuminata	28.00	4.00e-28	121.00
IUUC-Mpu-066054	Mustela putorius furo	83.63	0.00e+00	4994.00
IUUC-Mlu-068235	Myotis lucifugus	81.78	0.00e+00	4866.00
IUUC-Nfi-068420	Neosartorya fischeri	31.20	3.00e-38	154.00
IUUC-Nle-069401	Nomascus leucogenys	84.25	0.00e+00	5028.00
IUUC-Opr-070543	Ochotona princeps	82.71	0.00e+00	2112.00
IUUC-Ont-071790	Oreochromis niloticus	67.25	0.00e+00	3895.00
IUUC-Oan-072796	Ornithorhynchus anatinus	81.15	2.00e-96	344.00
IUUC-Ocu-074711	Oryctolagus cuniculus	83.66	0.00e+00	4951.00
IUUC-Osa-085332	Oryza sativa	25.23	1.00e-21	98.20
IUUC-Ola-087560	Oryzias latipes	65.97	0.00e+00	3865.00
IUUC-Oga-088868	Otolemur garnettii	82.50	0.00e+00	4879.00
IUUC-Oar-090063	Ovis aries	83.10	0.00e+00	4967.00
IUUC-Ptr-091058	Pan troglodytes	83.92	0.00e+00	5019.00
IUUC-Ppa-095505	Physcomitrella patens	29.62	2.00e-43	172.00
IUUC-Pfo-097521	Poecilia formosa	64.99	0.00e+00	3776.00
IUUC-Pab-098507	Pongo abelii	83.98	0.00e+00	4639.00
IUUC-Pca-100419	Procavia capensis	79.84	0.00e+00	1512.00
IUUC-Pva-102432	Pteropus vampyrus	84.61	0.00e+00	3041.00
IUUC-Rno-104981	Rattus norvegicus	82.32	0.00e+00	4838.00
IUUC-Smo-109444	Selaginella moellendorffii	23.55	5.00e-16	79.00
IUUC-Sit-109981	Setaria italica	35.40	1.00e-11	66.20
IUUC-Sly-110968	Solanum lycopersicum	32.08	6.00e-37	150.00
IUUC-Sar-112928	Sorex araneus	77.76	0.00e+00	1732.00
IUUC-Tgu-117271	Taeniopygia guttata	79.15	0.00e+00	4716.00
IUUC-Tni-119924	Tetraodon nigroviridis	65.15	0.00e+00	3824.00
IUUC-Tbe-127760	Tupaia belangeri	82.03	0.00e+00	3310.00
IUUC-Ttr-128323	Tursiops truncatus	79.65	0.00e+00	3136.00
IUUC-Vvi-131584	Vitis vinifera	29.00	4.00e-35	144.00
IUUC-Xtr-132638	Xenopus tropicalis	73.30	0.00e+00	4147.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence