iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130918

UUCD1 version

UUC-ViV-00142

Ensembl Protein ID

VIT_05s0077g02310.t01

UniProt Accession

D7SYE1; D7SYE1_VITVI

Genbank Protein ID

CBI22998.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595246

Gene Name

VIT_05s0077g02310

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_05s0077g02310	VIT_05s0077g02310.t01	VIT_05s0077g02310.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-42	141.3	172	208
UBD/Beta-Prp	2.70e-58	198.1	257	460

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH ++v+++af  s+  +++Gs D tik+WD+ +g+l
   Q: 172  GHLGWVRSIAFdpSNSWFCTGSADRTIKIWDVGSGRL 208
           8***********544899**************99986 PP

UBD/Beta-Prp

   S: 51   heaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdg 138
           h ++v+++ ++p+ +il+tg++D + +vwd+++  ++h+l+gh+++v+s+   p++  +v+Gshd ti+ wdl+ g+ +  tl+ h++
   Q: 257  HLSGVYCLALHPTIDILLTGGRDSVCRVWDIRSKMQIHALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMA-TLTHHKK 343
           6789***************************************************************************9.******* PP
   S: 139  vvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght.... 222
           +v+ +++hp++  ++s+s+D++ + ++l+ g+ l+ + ++++  ++ ++++++g  +++++++g+  +wd ++g+    ++++t    
   Q: 344  SVRAMALHPKEHTFASASADNI-KKFNLPKGEFLHNMLSQQKTIINAMAVNEEG-VMATAGDNGSMWFWDWKSGHN--FQQAQTivqp 427
           ********************95.55************999************98.999**************9974..4444445567 PP
   S: 223  ......dnvksvrfspnderlvsgssDgsiriW 249
                 + ++ +  +  + rlv++ +D++i++W
   Q: 428  gsldseAGIYALSYDLTGSRLVTCEADKTIKMW 460
           78888889999999999**************** PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MPGPTVEMEP VEPQSLKKLS FKSLKRALDL FSPIHGHFAP PDPESKKIRL SHKIQLEYGG 60
IKSATNPNQA NSTQPDGNSQ ASAPSNALAL PGTENSKDPQ TGGTQNALVV GPSVQQKGLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGCGT AGGTGTGTCA CCGTGTGTGT AAGTCTGCTC TGGTGGCGGT GGAAAGAAGA 60
CGATGCCAGG TCCGACGGTA GAGATGGAGC CAGTGGAGCC ACAGTCTCTG AAGAAGCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071011--C:precatalytic spliceosome
GO:0000974--C:Prp19 complex
GO:0048825--P:cotyledon development
GO:0009870--P:defense response signaling pathway, resistance gene-dependent
GO:0010204--P:defense response signaling pathway, resistance gene-independent
GO:0042742--P:defense response to bacterium
GO:0050832--P:defense response to fungus
GO:0009755--P:hormone-mediated signaling pathway
GO:0000398--P:mRNA splicing, via spliceosome
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0006508--P:proteolysis
GO:0009749--P:response to glucose
GO:0048364--P:root development
GO:0010182--P:sugar mediated signaling pathway

KEGG

vvi:100248018

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000084	Aegilops tauschii	71.85	0.00e+00	704.00
IUUC-Aml-001605	Ailuropoda melanoleuca	48.04	3.00e-134	470.00
IUUC-Atr-002757	Amborella trichopoda	72.93	0.00e+00	704.00
IUUC-Apl-003198	Anas platyrhynchos	46.90	1.00e-133	469.00
IUUC-Aca-004683	Anolis carolinensis	46.65	4.00e-132	463.00
IUUC-Aly-005775	Arabidopsis lyrata	79.79	0.00e+00	800.00
IUUC-Ath-007460	Arabidopsis thaliana	77.30	0.00e+00	772.00
IUUC-Ago-007884	Ashbya gossypii	48.56	1.00e-100	359.00
IUUC-Acl-008153	Aspergillus clavatus	59.15	8.00e-118	416.00
IUUC-Afl-008384	Aspergillus flavus	54.62	7.00e-119	419.00
IUUC-Afu-009045	Aspergillus fumigatus	59.45	6.00e-118	416.00
IUUC-Ani-009229	Aspergillus nidulans	57.77	3.00e-116	410.00
IUUC-Ang-009812	Aspergillus niger	58.68	7.00e-111	392.00
IUUC-Aor-010059	Aspergillus oryzae	54.62	7.00e-119	419.00
IUUC-Ate-010351	Aspergillus terreus	53.83	4.00e-124	437.00
IUUC-Ame-011613	Astyanax mexicanus	37.16	2.00e-75	275.00
IUUC-Bgr-012042	Blumeria graminis	57.02	3.00e-125	440.00
IUUC-Bta-012406	Bos taurus	47.73	3.00e-133	467.00
IUUC-Bci-013760	Botrytis cinerea	58.15	9.00e-122	429.00
IUUC-Bdi-014776	Brachypodium distachyon	76.47	0.00e+00	724.00
IUUC-Bol-016189	Brassica oleracea	78.97	0.00e+00	794.00
IUUC-Bra-018044	Brassica rapa	79.18	0.00e+00	796.00
IUUC-Cel-018651	Caenorhabditis elegans	47.90	1.00e-124	439.00
IUUC-Cja-019974	Callithrix jacchus	47.54	2.00e-133	468.00
IUUC-Cfa-021085	Canis familiaris	47.55	2.00e-134	471.00
IUUC-Cpo-021458	Cavia porcellus	48.32	1.00e-135	475.00
IUUC-Cre-022880	Chlamydomonas reinhardtii	70.85	4.00e-156	543.00
IUUC-Csa-023883	Chlorocebus sabaeus	48.13	1.00e-133	469.00
IUUC-Cho-024623	Choloepus hoffmanni	48.72	1.00e-132	466.00
IUUC-Cin-025190	Ciona intestinalis	46.22	5.00e-127	446.00
IUUC-Csv-026367	Ciona savignyi	59.01	2.00e-123	434.00
IUUC-Cgl-026499	Colletotrichum gloeosporioides	60.37	4.00e-125	440.00
IUUC-Cne-027069	Cryptococcus neoformans	46.03	4.00e-115	407.00
IUUC-Cme-027233	Cyanidioschyzon merolae	27.95	5.00e-30	124.00
IUUC-Dre-028260	Danio rerio	49.30	2.00e-136	478.00
IUUC-Dno-029112	Dasypus novemcinctus	48.32	4.00e-134	470.00
IUUC-Dor-031118	Dipodomys ordii	54.39	7.00e-129	452.00
IUUC-Dse-031493	Dothistroma septosporum	48.20	3.00e-124	437.00
IUUC-Dme-032138	Drosophila melanogaster	47.79	3.00e-133	467.00
IUUC-Ete-032411	Echinops telfairi	43.06	1.00e-106	379.00
IUUC-Eca-033521	Equus caballus	47.35	6.00e-134	469.00
IUUC-Eeu-035249	Erinaceus europaeus	46.75	1.00e-99	355.00
IUUC-Fca-036358	Felis catus	47.36	3.00e-133	467.00
IUUC-Fal-036933	Ficedula albicollis	47.48	2.00e-134	471.00
IUUC-Fox-037713	Fusarium oxysporum	60.67	6.00e-125	439.00
IUUC-Fso-038380	Fusarium solani	60.79	3.00e-125	441.00
IUUC-Gmo-039133	Gadus morhua	48.30	6.00e-136	476.00
IUUC-Ggr-039915	Gaeumannomyces graminis	59.88	1.00e-118	419.00
IUUC-Gga-041176	Gallus gallus	47.44	9.00e-134	469.00
IUUC-Gac-042344	Gasterosteus aculeatus	49.31	2.00e-136	478.00
IUUC-Gma-043328	Glycine max	84.82	0.00e+00	830.00
IUUC-Ggo-044478	Gorilla gorilla	47.17	9.00e-133	466.00
IUUC-Hsa-046037	Homo sapiens	47.09	4.00e-133	467.00
IUUC-Hvu-047349	Hordeum vulgare	75.41	0.00e+00	721.00
IUUC-Itr-048390	Ictidomys tridecemlineatus	48.13	4.00e-135	474.00
IUUC-Kpa-049343	Komagataella pastoris	56.15	3.00e-114	404.00
IUUC-Lch-049830	Latimeria chalumnae	47.53	1.00e-133	469.00
IUUC-Lpe-051442	Leersia perrieri	75.63	0.00e+00	712.00
IUUC-Loc-051794	Lepisosteus oculatus	48.29	2.00e-131	461.00
IUUC-Lma-053137	Leptosphaeria maculans	54.17	3.00e-120	424.00
IUUC-Laf-053471	Loxodonta africana	47.95	2.00e-134	471.00
IUUC-Mcc-055627	Macaca mulatta	48.13	1.00e-133	469.00
IUUC-Meu-056148	Macropus eugenii	46.93	2.00e-126	445.00
IUUC-Mor-056960	Magnaporthe oryzae	60.37	3.00e-124	437.00
IUUC-Mtr-057816	Medicago truncatula	81.34	0.00e+00	807.00
IUUC-Mla-059031	Melampsora laricipopulina	57.67	2.00e-113	401.00
IUUC-Mga-059337	Meleagris gallopavo	46.69	1.00e-132	465.00
IUUC-Mvi-060217	Microbotryum violaceum	57.10	2.00e-115	408.00
IUUC-Mmr-061018	Microcebus murinus	47.93	2.00e-134	471.00
IUUC-Mdo-062863	Monodelphis domestica	46.03	7.00e-129	452.00
IUUC-Mmu-063988	Mus musculus	48.32	4.00e-134	470.00
IUUC-Mac-064459	Musa acuminata	76.75	0.00e+00	721.00
IUUC-Mpu-066559	Mustela putorius furo	47.55	3.00e-134	471.00
IUUC-Mlu-067361	Myotis lucifugus	48.10	3.00e-133	467.00
IUUC-Nfi-068492	Neosartorya fischeri	59.15	9.00e-118	416.00
IUUC-Ncr-068808	Neurospora crassa	60.18	5.00e-125	440.00
IUUC-Nle-069875	Nomascus leucogenys	47.09	2.00e-133	468.00
IUUC-Opr-070462	Ochotona princeps	59.55	8.00e-99	353.00
IUUC-Ont-071365	Oreochromis niloticus	48.82	4.00e-136	477.00
IUUC-Oan-072708	Ornithorhynchus anatinus	47.09	1.00e-132	465.00
IUUC-Ocu-074594	Oryctolagus cuniculus	47.36	2.00e-134	471.00
IUUC-Oba-075570	Oryza barthii	73.95	0.00e+00	692.00
IUUC-Obr-076366	Oryza brachyantha	88.28	1.00e-130	457.00
IUUC-Ogl-077153	Oryza glaberrima	73.74	0.00e+00	689.00
IUUC-Ogu-078540	Oryza glumaepatula	73.95	0.00e+00	693.00
IUUC-Oin-079612	Oryza indica	73.18	0.00e+00	687.00
IUUC-Olo-081077	Oryza longistaminata	73.18	0.00e+00	687.00
IUUC-Ome-081236	Oryza meridionalis	72.56	0.00e+00	684.00
IUUC-Oni-082499	Oryza nivara	73.95	0.00e+00	693.00
IUUC-Opu-083499	Oryza punctata	73.39	0.00e+00	689.00
IUUC-Oru-084276	Oryza rufipogon	73.95	0.00e+00	693.00
IUUC-Osa-085849	Oryza sativa	73.95	0.00e+00	693.00
IUUC-Ola-086655	Oryzias latipes	48.71	3.00e-134	471.00
IUUC-Olu-087637	Ostreococcus lucimarinus	60.51	5.00e-144	503.00
IUUC-Oga-087934	Otolemur garnettii	47.66	2.00e-133	468.00
IUUC-Oar-090185	Ovis aries	47.45	7.00e-133	466.00
IUUC-Ptr-091198	Pan troglodytes	47.09	2.00e-133	468.00
IUUC-Pan-092622	Papio anubis	48.13	1.00e-133	469.00
IUUC-Psi-093320	Pelodiscus sinensis	46.91	9.00e-133	466.00
IUUC-Pma-094638	Petromyzon marinus	46.65	2.00e-132	465.00
IUUC-Pno-094826	Phaeosphaeria nodorum	46.11	2.00e-97	348.00
IUUC-Ppa-095576	Physcomitrella patens	68.02	1.00e-177	615.00
IUUC-Pfo-096894	Poecilia formosa	49.12	3.00e-134	471.00
IUUC-Pab-098020	Pongo abelii	47.27	3.00e-133	467.00
IUUC-Pop-099180	Populus trichocarpa	84.50	0.00e+00	833.00
IUUC-Pca-100909	Procavia capensis	46.50	8.00e-106	376.00
IUUC-Ppe-101346	Prunus persica	81.46	0.00e+00	783.00
IUUC-Pva-102167	Pteropus vampyrus	48.62	4.00e-110	390.00
IUUC-Pgr-103516	Puccinia graminis	57.10	9.00e-114	402.00
IUUC-Ptt-103738	Puccinia triticina	57.06	3.00e-114	404.00
IUUC-Pte-104352	Pyrenophora teres	55.52	6.00e-122	429.00
IUUC-Pyt-104632	Pyrenophora triticirepentis	56.37	2.00e-123	434.00
IUUC-Rno-105291	Rattus norvegicus	48.02	2.00e-133	468.00
IUUC-Sce-106204	Saccharomyces cerevisiae	50.00	1.00e-101	362.00
IUUC-Sha-106943	Sarcophilus harrisii	45.17	3.00e-125	441.00
IUUC-Sja-107659	Schizosaccharomyces japonicus	59.82	1.00e-117	416.00
IUUC-Spo-108049	Schizosaccharomyces pombe	49.57	9.00e-124	436.00
IUUC-Smo-109043	Selaginella moellendorffii	78.30	1.00e-172	597.00
IUUC-Sit-110431	Setaria italica	76.63	0.00e+00	722.00
IUUC-Sly-111391	Solanum lycopersicum	82.30	0.00e+00	756.00
IUUC-Stu-112364	Solanum tuberosum	75.66	5.00e-139	486.00
IUUC-Sar-113450	Sorex araneus	60.36	4.00e-126	444.00
IUUC-Sbi-113829	Sorghum bicolor	75.79	0.00e+00	712.00
IUUC-Sre-115153	Sporisorium reilianum	54.32	3.00e-109	387.00
IUUC-Ssc-116274	Sus scrofa	47.05	3.00e-133	468.00
IUUC-Tgu-117417	Taeniopygia guttata	47.47	2.00e-135	474.00
IUUC-Tru-117615	Takifugu rubripes	47.81	5.00e-127	447.00
IUUC-Tsy-119480	Tarsius syrichta	48.51	2.00e-133	468.00
IUUC-Tni-119847	Tetraodon nigroviridis	47.22	2.00e-133	468.00
IUUC-Tca-121287	Theobroma cacao	84.57	0.00e+00	839.00
IUUC-Tre-122010	Trichoderma reesei	59.76	5.00e-123	433.00
IUUC-Tvi-122475	Trichoderma virens	59.76	3.00e-123	434.00
IUUC-Tae-124397	Triticum aestivum	75.41	0.00e+00	727.00
IUUC-Tur-126116	Triticum urartu	65.53	1.00e-163	568.00
IUUC-Tme-126992	Tuber melanosporum	58.05	6.00e-126	443.00
IUUC-Tbe-127803	Tupaia belangeri	52.48	6.00e-97	346.00
IUUC-Ttr-128933	Tursiops truncatus	48.02	1.00e-133	469.00
IUUC-Uma-129447	Ustilago maydis	52.85	6.00e-107	380.00
IUUC-Vda-129780	Verticillium dahliae	51.60	4.00e-126	444.00
IUUC-Vpa-130557	Vicugna pacos	44.33	1.00e-46	179.00
IUUC-Xtr-132409	Xenopus tropicalis	45.85	1.00e-129	455.00
IUUC-Xma-133420	Xiphophorus maculatus	49.11	7.00e-137	479.00
IUUC-Yli-134362	Yarrowia lipolytica	51.44	4.00e-115	407.00
IUUC-Zma-135804	Zea mays	75.00	0.00e+00	696.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence