iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006073

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

GL348716

Gene Name

ARALYDRAFT_668053

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Al_scaffold_0004_772	Al_scaffold_0004_772	Al_scaffold_0004_772

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	82.04	1.00e-107	385.00	IUUC-Ath-007704

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEKDDLEVTG RSTPEQENIA LLMLDVQGIR KSLTSSIPVL LTRDQSNFAY EFAIEAISSD 60
IIIDIPSQKE TCNICLNDDI NADQMFSVDK CGHMFCSECV KRHIEVRLLE GSLIRCPDYR 120

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Nucleotide Sequence
(Fasta)

ATGGAGAAAG ATGACCTAGA AGTAGAACCC GCCGGAAAAC CTTTGTACAG GCTTTACTTC 60
AAGGGTTTGG TAACCGAGGA AAAAGCGATG TTATTCGCAG CATTCGGCGT TGCAATTTGC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF01485--IBR
PF13639--zf-RING_2

SMART

SM00647--IBR

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_668053

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001257	Ailuropoda melanoleuca	30.21	2.00e-13	68.90
IUUC-Atr-002709	Amborella trichopoda	29.57	6.00e-27	115.00
IUUC-Ath-007704	Arabidopsis thaliana	82.04	7.00e-109	386.00
IUUC-Bol-016316	Brassica oleracea	32.68	2.00e-28	119.00
IUUC-Fal-037339	Ficedula albicollis	30.09	2.00e-17	82.00
IUUC-Fox-037849	Fusarium oxysporum	31.71	8.10e-02	30.80
IUUC-Lch-050168	Latimeria chalumnae	31.05	1.00e-14	72.80
IUUC-Mdo-062839	Monodelphis domestica	31.02	1.00e-13	69.30
IUUC-Oan-072980	Ornithorhynchus anatinus	28.57	5.00e-12	64.30
IUUC-Psi-093481	Pelodiscus sinensis	29.41	1.00e-13	69.30

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence