iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cpo-022461

Ensembl Protein ID

ENSCPOP00000020976.1

UniProt Accession

H0WDA4; H0WDA4_CAVPO

Genbank Protein ID

ENSCPOP00000020976

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02032145

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000020413.1	ENSCPOT00000028068.1	ENSCPOP00000020976.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-17	61.1	51	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++ vt++++ ++ +++v+++ D + +vW 
   Q: 51   HNGQVTGIDWaPEsNRIVTCGTDRNAYVWT 80
           9**********888***************6 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MAYHSFLVEP ISCHAWNKDR TQIAICPNNH EVHIYEKSGA KWTKVHELKE HNGQVTGIDW 60
APESNRIVTC GTDRNAYVWT LKGSTWKPTL VILRINRAAR CVRWAPNENK FAVGSGSRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCTACC ACAGCTTCCT GGTGGAACCC ATCAGCTGTC ATGCCTGGAA CAAAGACCGC 60
ACACGTGAGT GGCTCTGGGT CTCTGCACTG AGGGAAGTAG TCTCCAGGGA AGGATGCAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	45.20	4.00e-64	238.00
IUUC-Aml-001709	Ailuropoda melanoleuca	96.28	0.00e+00	728.00
IUUC-Aly-006568	Arabidopsis lyrata	41.35	7.00e-80	290.00
IUUC-Ath-006683	Arabidopsis thaliana	41.73	2.00e-80	292.00
IUUC-Ame-011512	Astyanax mexicanus	80.86	0.00e+00	655.00
IUUC-Bta-012442	Bos taurus	96.23	0.00e+00	724.00
IUUC-Bol-016274	Brassica oleracea	42.74	3.00e-82	298.00
IUUC-Bra-016790	Brassica rapa	40.97	8.00e-81	293.00
IUUC-Cja-019899	Callithrix jacchus	97.05	0.00e+00	750.00
IUUC-Cfa-020067	Canis familiaris	96.24	0.00e+00	727.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	35.20	2.00e-35	141.00
IUUC-Csa-023277	Chlorocebus sabaeus	89.78	0.00e+00	689.00
IUUC-Dre-028141	Danio rerio	80.86	0.00e+00	649.00
IUUC-Dor-030559	Dipodomys ordii	96.51	0.00e+00	734.00
IUUC-Dse-031574	Dothistroma septosporum	42.62	6.00e-84	304.00
IUUC-Ete-032299	Echinops telfairi	94.35	0.00e+00	738.00
IUUC-Eca-033593	Equus caballus	96.25	0.00e+00	726.00
IUUC-Fca-036254	Felis catus	97.85	0.00e+00	736.00
IUUC-Fal-037453	Ficedula albicollis	88.77	0.00e+00	697.00
IUUC-Gmo-038471	Gadus morhua	70.59	5.00e-164	570.00
IUUC-Gga-040898	Gallus gallus	88.17	0.00e+00	699.00
IUUC-Gac-042236	Gasterosteus aculeatus	75.33	2.00e-178	618.00
IUUC-Gma-043227	Glycine max	40.75	5.00e-80	291.00
IUUC-Ggo-045355	Gorilla gorilla	82.84	4.00e-170	590.00
IUUC-Hsa-046623	Homo sapiens	98.92	0.00e+00	739.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	98.39	0.00e+00	747.00
IUUC-Kpa-049288	Komagataella pastoris	41.37	1.00e-75	276.00
IUUC-Lch-049679	Latimeria chalumnae	79.25	0.00e+00	639.00
IUUC-Lpe-050869	Leersia perrieri	41.50	7.00e-78	284.00
IUUC-Loc-052140	Lepisosteus oculatus	80.86	0.00e+00	634.00
IUUC-Laf-054287	Loxodonta africana	93.62	0.00e+00	696.00
IUUC-Meu-056302	Macropus eugenii	91.13	0.00e+00	715.00
IUUC-Mtr-057659	Medicago truncatula	41.02	5.00e-83	301.00
IUUC-Mga-059279	Meleagris gallopavo	88.17	0.00e+00	700.00
IUUC-Mmr-060752	Microcebus murinus	97.78	0.00e+00	726.00
IUUC-Mdo-062836	Monodelphis domestica	87.10	0.00e+00	675.00
IUUC-Mmu-064099	Mus musculus	96.28	0.00e+00	726.00
IUUC-Mpu-066247	Mustela putorius furo	97.04	0.00e+00	717.00
IUUC-Mlu-067571	Myotis lucifugus	97.04	0.00e+00	748.00
IUUC-Nle-069492	Nomascus leucogenys	84.68	3.00e-172	597.00
IUUC-Ont-071316	Oreochromis niloticus	76.90	2.00e-177	614.00
IUUC-Oan-072692	Ornithorhynchus anatinus	89.25	0.00e+00	704.00
IUUC-Ocu-074187	Oryctolagus cuniculus	92.74	0.00e+00	710.00
IUUC-Oba-075379	Oryza barthii	41.64	1.00e-78	286.00
IUUC-Obr-076404	Oryza brachyantha	42.03	3.00e-79	288.00
IUUC-Ogl-077409	Oryza glaberrima	39.24	2.00e-72	266.00
IUUC-Ogu-078759	Oryza glumaepatula	41.64	2.00e-78	286.00
IUUC-Oin-079118	Oryza indica	41.69	2.00e-79	288.00
IUUC-Olo-081055	Oryza longistaminata	41.03	3.00e-69	255.00
IUUC-Ome-081281	Oryza meridionalis	41.64	2.00e-78	285.00
IUUC-Oni-083043	Oryza nivara	41.64	1.00e-78	286.00
IUUC-Oru-084839	Oryza rufipogon	41.64	1.00e-78	286.00
IUUC-Osa-085377	Oryza sativa	41.69	4.00e-79	288.00
IUUC-Oga-088610	Otolemur garnettii	98.12	0.00e+00	739.00
IUUC-Oar-089639	Ovis aries	94.88	0.00e+00	707.00
IUUC-Ptr-091023	Pan troglodytes	98.92	0.00e+00	739.00
IUUC-Pan-091727	Papio anubis	98.39	0.00e+00	745.00
IUUC-Pfo-097058	Poecilia formosa	75.07	2.00e-177	615.00
IUUC-Pab-098238	Pongo abelii	98.66	0.00e+00	742.00
IUUC-Pca-100580	Procavia capensis	94.62	0.00e+00	712.00
IUUC-Ppe-101681	Prunus persica	42.51	2.00e-82	298.00
IUUC-Pva-102928	Pteropus vampyrus	94.62	0.00e+00	697.00
IUUC-Rno-104846	Rattus norvegicus	96.77	0.00e+00	729.00
IUUC-Sly-111048	Solanum lycopersicum	42.59	1.00e-78	286.00
IUUC-Sar-113404	Sorex araneus	78.57	2.00e-157	548.00
IUUC-Sbi-114685	Sorghum bicolor	42.35	6.00e-79	287.00
IUUC-Tru-118106	Takifugu rubripes	75.00	2.00e-179	621.00
IUUC-Tni-120079	Tetraodon nigroviridis	76.32	0.00e+00	627.00
IUUC-Tca-121645	Theobroma cacao	43.09	2.00e-80	292.00
IUUC-Tae-125810	Triticum aestivum	37.56	8.00e-71	260.00
IUUC-Tur-126640	Triticum urartu	39.78	9.00e-69	253.00
IUUC-Ttr-128698	Tursiops truncatus	97.31	0.00e+00	734.00
IUUC-Vvi-131647	Vitis vinifera	42.29	9.00e-82	296.00
IUUC-Xtr-131893	Xenopus tropicalis	83.87	0.00e+00	664.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence