iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tni-120079

Ensembl Protein ID

ENSTNIP00000023044.1

UniProt Accession

Q4RBG9; Q4RBG9_TETNG

Genbank Protein ID

CAG14264.1

Protein Name

Chromosome undetermined SCAF21483, whole genome shotgun sequence

Genbank Nucleotide ID

CAAE01021483

Gene Name

arpc1b; GSTENG00038515001

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTNIG00000019781.1	ENSTNIT00000023286.1	ENSTNIP00000023044.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-19	68.3	51	83

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H++ vt++++ +d +++v+++ D + +vW l++
   Q: 51   HNGQVTGVDWaPDsNRIVTCGADRNAYVWTLKE 83
           9**********999***************8866 PP

Organism

Tetraodon nigroviridis

Protein Sequence
(Fasta)

MAYHSFLLEP ISCHAWNKDR TQVALCPNNH EVHIYKKDGS KWSKIHELKE HNGQVTGVDW 60
APDSNRIVTC GADRNAYVWT LKEGAWKPTL VILRINRAAR CVKWSPQENK FAVGSGSRLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTCTGTCGT TGGCGTTCGC GTTGACTGGC CAGAGTCCGC GAGCCGAGCG CCCTCATCTT 60
TTATTCGATC TGCCACTTTG CCCCTCTTTT TTGTCTCTCG CCTTCTCTCT GCAGCGTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

tng:GSTEN00038515G001

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001709	Ailuropoda melanoleuca	74.48	3.00e-177	613.00
IUUC-Ame-011512	Astyanax mexicanus	79.42	0.00e+00	647.00
IUUC-Bta-012442	Bos taurus	74.28	2.00e-176	610.00
IUUC-Cja-019899	Callithrix jacchus	75.33	4.00e-178	617.00
IUUC-Cfa-020067	Canis familiaris	74.21	7.00e-176	609.00
IUUC-Cpo-022461	Cavia porcellus	75.53	3.00e-179	620.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	36.22	1.00e-34	139.00
IUUC-Csa-023277	Chlorocebus sabaeus	73.16	2.00e-172	597.00
IUUC-Dre-028141	Danio rerio	80.74	0.00e+00	649.00
IUUC-Dor-030559	Dipodomys ordii	75.26	1.00e-178	619.00
IUUC-Ete-032299	Echinops telfairi	74.21	1.00e-176	612.00
IUUC-Eca-033593	Equus caballus	74.02	2.00e-175	607.00
IUUC-Fca-036254	Felis catus	75.26	5.00e-178	616.00
IUUC-Fal-037453	Ficedula albicollis	77.63	0.00e+00	629.00
IUUC-Gmo-038471	Gadus morhua	83.06	0.00e+00	636.00
IUUC-Gga-040898	Gallus gallus	76.72	0.00e+00	625.00
IUUC-Gac-042236	Gasterosteus aculeatus	87.89	0.00e+00	697.00
IUUC-Ggo-045355	Gorilla gorilla	61.42	8.00e-137	479.00
IUUC-Hsa-046623	Homo sapiens	75.00	5.00e-178	616.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	75.79	6.00e-180	622.00
IUUC-Lch-049679	Latimeria chalumnae	75.73	4.00e-177	613.00
IUUC-Loc-052140	Lepisosteus oculatus	78.36	4.00e-179	620.00
IUUC-Laf-054287	Loxodonta africana	73.18	1.00e-170	592.00
IUUC-Meu-056302	Macropus eugenii	77.51	0.00e+00	633.00
IUUC-Mga-059279	Meleagris gallopavo	76.72	0.00e+00	626.00
IUUC-Mmr-060752	Microcebus murinus	76.15	2.00e-176	611.00
IUUC-Mdo-062836	Monodelphis domestica	74.87	3.00e-172	597.00
IUUC-Mmu-064099	Mus musculus	74.48	1.00e-176	611.00
IUUC-Mpu-066247	Mustela putorius furo	75.00	2.00e-175	608.00
IUUC-Mlu-067571	Myotis lucifugus	77.04	0.00e+00	629.00
IUUC-Ont-071316	Oreochromis niloticus	90.26	0.00e+00	682.00
IUUC-Oan-072692	Ornithorhynchus anatinus	76.46	3.00e-180	624.00
IUUC-Ocu-074187	Oryctolagus cuniculus	73.23	4.00e-171	593.00
IUUC-Ola-087029	Oryzias latipes	86.05	7.00e-169	585.00
IUUC-Oga-088610	Otolemur garnettii	75.53	2.00e-178	618.00
IUUC-Oar-089639	Ovis aries	74.02	3.00e-173	600.00
IUUC-Ptr-091023	Pan troglodytes	75.00	6.00e-178	616.00
IUUC-Pan-091727	Papio anubis	75.26	7.00e-179	619.00
IUUC-Pfo-097058	Poecilia formosa	89.47	0.00e+00	700.00
IUUC-Pab-098238	Pongo abelii	75.26	2.00e-179	621.00
IUUC-Pca-100580	Procavia capensis	74.21	2.00e-174	605.00
IUUC-Ppe-101681	Prunus persica	40.00	3.00e-79	288.00
IUUC-Pva-102928	Pteropus vampyrus	72.11	5.00e-167	580.00
IUUC-Rno-104846	Rattus norvegicus	75.00	3.00e-177	613.00
IUUC-Tru-118106	Takifugu rubripes	96.31	0.00e+00	738.00
IUUC-Ttr-128698	Tursiops truncatus	75.79	3.00e-179	620.00
IUUC-Vvi-131647	Vitis vinifera	41.46	2.00e-80	292.00
IUUC-Xtr-131893	Xenopus tropicalis	76.19	4.00e-179	620.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence