iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135615

Ensembl Protein ID

Zm00001d051913_T002

UniProt Accession

A0A1D6QAV7; A0A1D6QAV7_MAIZE

Genbank Protein ID

AQK55447.1; AQK55448.1

Protein Name

Actin protein 2/3 complex subunit 1B

Genbank Nucleotide ID

CM000780; CM000780

Gene Name

ZEAMMB73_Zm00001d051913

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d051913	Zm00001d051913_T009	Zm00001d051913_T009
Zm00001d051913	Zm00001d051913_T002	Zm00001d051913_T002
Zm00001d051913	Zm00001d051913_T003	Zm00001d051913_T003
Zm00001d051913	Zm00001d051913_T001	Zm00001d051913_T001
Zm00001d051913	Zm00001d051913_T010	Zm00001d051913_T010
Zm00001d051913	Zm00001d051913_T007	Zm00001d051913_T007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-18	68.5	143	172

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++svt+la+ ++  +l+++s Dg+++v++
   Q: 143  HESSVTSLAWhPNnIYLATSSTDGKCRVFS 172
           ***********763559***********97 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MAAVAIHQFA ECITCHAWSP DQSMIAFCPN NHEVHIYKFF TDKWEKLHVL SKHDQMVSGI 60
DWSKSSNKIV TVSHDRNSYV WTQEGSDWVP TLVILKLNRA ALCVQWSPKE NKFAVGSGAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGTAGCAT TTCCTTTTGC CTCTCTCCAC TCTACCTCTC CTCTCCTGTG CGCTACAGCG 60
AGGGGGAAGG GGAGCGTCGA CCGATTCGTC CCGGCCTCCC GTCCCGCCGC TGGCCTCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	68.94	2.00e-152	531.00
IUUC-Aml-002044	Ailuropoda melanoleuca	41.51	2.00e-75	275.00
IUUC-Apl-003325	Anas platyrhynchos	41.97	1.00e-78	285.00
IUUC-Aca-004736	Anolis carolinensis	41.25	1.00e-78	285.00
IUUC-Aly-005532	Arabidopsis lyrata	68.22	2.00e-154	537.00
IUUC-Ath-006683	Arabidopsis thaliana	68.48	5.00e-155	539.00
IUUC-Ago-007966	Ashbya gossypii	32.73	1.00e-52	199.00
IUUC-Acl-008334	Aspergillus clavatus	37.11	7.00e-67	247.00
IUUC-Afl-008485	Aspergillus flavus	35.47	1.00e-60	227.00
IUUC-Afu-008780	Aspergillus fumigatus	36.60	1.00e-66	245.00
IUUC-Ani-009417	Aspergillus nidulans	37.27	6.00e-66	243.00
IUUC-Ang-009543	Aspergillus niger	38.40	2.00e-68	251.00
IUUC-Aor-010234	Aspergillus oryzae	36.50	2.00e-64	238.00
IUUC-Ate-010386	Aspergillus terreus	38.70	2.00e-67	249.00
IUUC-Ame-011852	Astyanax mexicanus	42.23	4.00e-79	287.00
IUUC-Bgr-012192	Blumeria graminis	34.54	9.00e-59	219.00
IUUC-Bta-012530	Bos taurus	41.51	2.00e-75	275.00
IUUC-Bci-013616	Botrytis cinerea	35.09	2.00e-59	222.00
IUUC-Bdi-014632	Brachypodium distachyon	85.13	0.00e+00	690.00
IUUC-Bol-016274	Brassica oleracea	69.61	2.00e-162	564.00
IUUC-Bra-016790	Brassica rapa	69.61	7.00e-160	556.00
IUUC-Cel-018122	Caenorhabditis elegans	38.46	1.00e-69	256.00
IUUC-Cja-019362	Callithrix jacchus	41.19	1.00e-75	276.00
IUUC-Cfa-020167	Canis familiaris	41.19	1.00e-75	276.00
IUUC-Cpo-021933	Cavia porcellus	41.51	1.00e-75	276.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	39.27	2.00e-39	154.00
IUUC-Csa-023277	Chlorocebus sabaeus	39.85	4.00e-75	274.00
IUUC-Cho-024449	Choloepus hoffmanni	30.34	6.00e-13	67.80
IUUC-Cin-025186	Ciona intestinalis	34.86	2.00e-60	225.00
IUUC-Csv-026275	Ciona savignyi	35.43	8.00e-61	226.00
IUUC-Cgl-026732	Colletotrichum gloeosporioides	34.02	6.00e-54	204.00
IUUC-Cne-026926	Cryptococcus neoformans	36.47	1.00e-72	266.00
IUUC-Dre-028057	Danio rerio	41.97	1.00e-78	285.00
IUUC-Dno-029092	Dasypus novemcinctus	40.72	1.00e-74	273.00
IUUC-Dor-030391	Dipodomys ordii	41.25	2.00e-74	272.00
IUUC-Dse-031574	Dothistroma septosporum	36.86	1.00e-63	236.00
IUUC-Dme-031907	Drosophila melanogaster	37.40	3.00e-68	251.00
IUUC-Ete-032299	Echinops telfairi	41.39	6.00e-79	287.00
IUUC-Eca-034074	Equus caballus	41.19	2.00e-75	275.00
IUUC-Fca-036154	Felis catus	41.51	2.00e-75	275.00
IUUC-Fal-037279	Ficedula albicollis	41.71	8.00e-79	286.00
IUUC-Fox-037842	Fusarium oxysporum	34.88	8.00e-61	226.00
IUUC-Fso-038276	Fusarium solani	35.31	1.00e-59	223.00
IUUC-Gmo-039673	Gadus morhua	39.79	2.00e-74	272.00
IUUC-Ggr-039762	Gaeumannomyces graminis	34.37	1.00e-58	219.00
IUUC-Gga-040189	Gallus gallus	41.97	6.00e-79	287.00
IUUC-Gac-042531	Gasterosteus aculeatus	41.04	4.00e-75	274.00
IUUC-Gma-043868	Glycine max	72.80	5.00e-168	583.00
IUUC-Ggo-045355	Gorilla gorilla	30.26	4.00e-42	164.00
IUUC-Hsa-046309	Homo sapiens	41.51	2.00e-75	275.00
IUUC-Hvu-047456	Hordeum vulgare	79.29	7.00e-92	328.00
IUUC-Itr-047864	Ictidomys tridecemlineatus	41.51	2.00e-75	275.00
IUUC-Kpa-049288	Komagataella pastoris	34.75	1.00e-49	189.00
IUUC-Lch-049679	Latimeria chalumnae	40.98	6.00e-78	283.00
IUUC-Lpe-050869	Leersia perrieri	82.82	0.00e+00	670.00
IUUC-Loc-052532	Lepisosteus oculatus	41.49	5.00e-78	284.00
IUUC-Lma-053109	Leptosphaeria maculans	35.48	5.00e-60	224.00
IUUC-Laf-054271	Loxodonta africana	41.78	7.00e-76	276.00
IUUC-Mcc-054857	Macaca mulatta	41.51	3.00e-75	275.00
IUUC-Meu-056302	Macropus eugenii	42.42	5.00e-80	290.00
IUUC-Mor-057167	Magnaporthe oryzae	35.73	1.00e-57	216.00
IUUC-Mtr-057659	Medicago truncatula	69.69	2.00e-163	568.00
IUUC-Mla-058886	Melampsora laricipopulina	35.22	5.00e-70	257.00
IUUC-Mga-059279	Meleagris gallopavo	41.39	9.00e-79	286.00
IUUC-Mvi-060302	Microbotryum violaceum	33.83	6.00e-66	244.00
IUUC-Mmr-060765	Microcebus murinus	41.51	1.00e-75	275.00
IUUC-Mdo-062326	Monodelphis domestica	41.71	4.00e-76	277.00
IUUC-Mmu-063819	Mus musculus	41.51	8.00e-76	276.00
IUUC-Mac-064632	Musa acuminata	76.49	5.00e-180	622.00
IUUC-Mpu-066247	Mustela putorius furo	41.13	1.00e-76	279.00
IUUC-Mlu-067184	Myotis lucifugus	41.51	2.00e-75	275.00
IUUC-Nfi-068383	Neosartorya fischeri	36.60	2.00e-66	245.00
IUUC-Ncr-068777	Neurospora crassa	34.20	2.00e-58	219.00
IUUC-Nle-069900	Nomascus leucogenys	41.19	1.00e-75	276.00
IUUC-Opr-070386	Ochotona princeps	36.81	8.00e-60	223.00
IUUC-Ont-071283	Oreochromis niloticus	40.36	2.00e-74	272.00
IUUC-Oan-073139	Ornithorhynchus anatinus	42.49	3.00e-76	278.00
IUUC-Ocu-074340	Oryctolagus cuniculus	41.51	2.00e-75	275.00
IUUC-Oba-075379	Oryza barthii	84.68	0.00e+00	670.00
IUUC-Obr-076404	Oryza brachyantha	83.59	0.00e+00	675.00
IUUC-Ogl-077409	Oryza glaberrima	81.54	0.00e+00	652.00
IUUC-Ogu-078759	Oryza glumaepatula	84.68	0.00e+00	669.00
IUUC-Oin-079118	Oryza indica	84.36	0.00e+00	677.00
IUUC-Olo-081055	Oryza longistaminata	84.50	2.00e-163	567.00
IUUC-Ome-081281	Oryza meridionalis	84.42	0.00e+00	668.00
IUUC-Oni-083043	Oryza nivara	84.68	0.00e+00	670.00
IUUC-Opu-083392	Oryza punctata	72.99	4.00e-160	556.00
IUUC-Oru-084839	Oryza rufipogon	84.68	0.00e+00	670.00
IUUC-Osa-085377	Oryza sativa	84.62	0.00e+00	679.00
IUUC-Ola-087274	Oryzias latipes	39.95	2.00e-74	271.00
IUUC-Oga-088016	Otolemur garnettii	41.51	6.00e-75	273.00
IUUC-Oar-089613	Ovis aries	41.51	2.00e-75	275.00
IUUC-Ptr-091548	Pan troglodytes	41.51	2.00e-75	275.00
IUUC-Pan-091727	Papio anubis	40.87	1.00e-78	286.00
IUUC-Psi-093767	Pelodiscus sinensis	41.19	6.00e-78	283.00
IUUC-Pma-094124	Petromyzon marinus	41.22	1.00e-79	289.00
IUUC-Pno-095031	Phaeosphaeria nodorum	34.20	9.00e-60	223.00
IUUC-Ppa-095858	Physcomitrella patens	55.24	1.00e-125	442.00
IUUC-Pfo-097107	Poecilia formosa	40.62	8.00e-75	273.00
IUUC-Pab-098238	Pongo abelii	40.66	4.00e-78	284.00
IUUC-Pca-100580	Procavia capensis	40.62	7.00e-77	280.00
IUUC-Ppe-101681	Prunus persica	71.36	4.00e-166	576.00
IUUC-Pva-102928	Pteropus vampyrus	39.59	3.00e-71	261.00
IUUC-Pgr-103309	Puccinia graminis	38.57	2.00e-70	259.00
IUUC-Ptt-103959	Puccinia triticina	37.62	3.00e-67	248.00
IUUC-Pte-104384	Pyrenophora teres	35.25	3.00e-56	211.00
IUUC-Pyt-104686	Pyrenophora triticirepentis	35.23	2.00e-56	212.00
IUUC-Rno-104846	Rattus norvegicus	40.36	8.00e-78	283.00
IUUC-Sce-106411	Saccharomyces cerevisiae	32.59	1.00e-47	183.00
IUUC-Sha-106691	Sarcophilus harrisii	41.71	6.00e-76	277.00
IUUC-Sja-107792	Schizosaccharomyces japonicus	35.03	4.00e-60	224.00
IUUC-Spo-108053	Schizosaccharomyces pombe	33.68	5.00e-57	214.00
IUUC-Ssl-108606	Sclerotinia sclerotiorum	35.09	3.00e-59	221.00
IUUC-Smo-108836	Selaginella moellendorffii	59.59	1.00e-136	478.00
IUUC-Sit-110150	Setaria italica	88.95	0.00e+00	709.00
IUUC-Sly-111048	Solanum lycopersicum	69.25	4.00e-159	553.00
IUUC-Sar-113404	Sorex araneus	47.24	1.00e-63	236.00
IUUC-Sbi-114685	Sorghum bicolor	88.72	0.00e+00	669.00
IUUC-Sre-115090	Sporisorium reilianum	40.60	7.00e-62	230.00
IUUC-Ssc-115851	Sus scrofa	41.78	1.00e-75	276.00
IUUC-Tgu-116701	Taeniopygia guttata	41.71	8.00e-79	286.00
IUUC-Tru-117603	Takifugu rubripes	41.62	5.00e-78	283.00
IUUC-Tsy-119515	Tarsius syrichta	54.17	1.00e-42	166.00
IUUC-Tni-119844	Tetraodon nigroviridis	40.10	2.00e-74	271.00
IUUC-Tca-121645	Theobroma cacao	75.39	2.00e-170	591.00
IUUC-Tre-122045	Trichoderma reesei	32.73	1.00e-58	219.00
IUUC-Tvi-122523	Trichoderma virens	32.90	6.00e-59	220.00
IUUC-Tae-125810	Triticum aestivum	75.52	0.00e+00	655.00
IUUC-Tur-126640	Triticum urartu	79.58	2.00e-179	621.00
IUUC-Tme-127018	Tuber melanosporum	32.89	5.00e-54	204.00
IUUC-Tbe-127321	Tupaia belangeri	43.88	6.00e-71	260.00
IUUC-Ttr-128698	Tursiops truncatus	40.62	3.00e-77	281.00
IUUC-Uma-129423	Ustilago maydis	40.45	5.00e-63	234.00
IUUC-Vda-129706	Verticillium dahliae	35.16	1.00e-58	219.00
IUUC-Vvi-131647	Vitis vinifera	70.98	4.00e-166	576.00
IUUC-Xtr-131893	Xenopus tropicalis	40.84	4.00e-76	277.00
IUUC-Xma-133435	Xiphophorus maculatus	40.62	8.00e-75	273.00
IUUC-Yli-134471	Yarrowia lipolytica	33.93	2.00e-52	199.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence