iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSONIG00000002245.1	ENSONIT00000002800.1	ENSONIP00000002799.1
ENSONIG00000002245.1	ENSONIT00000002801.1	ENSONIP00000002800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.10e-23	81.3	617	655

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHtd+ +c++  +d t l++G+ D+t+++WDlr+g++l+
   Q: 617  GHTDGASCIDIsNDgTKLWTGGLDNTVRCWDLREGRQLQ 655
           8***********999*********************998 PP

Organism

Oreochromis niloticus

Protein Sequence
(Fasta)

MFPQNRPPAP LQAPPGSSAS VVAAAAAAAA AASGTPQSLK LTYPETLDRI KEEFQFLQTQ 60
YHSLKLECEK LATEKTEIQR HYVMYYEMSY GLNIEMHKQT EIAKRLNVIC AQLIPFLSQE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGAAGTGA GGGACTGGGA GTGTTGTGTG TGAAAAGAGT GCAGGCCAAC GAGCGAGACA 60
AAAGAGGTTG CGGCTGCATT CAGTGTGCTG GTGGTGTGTC CGTCTCCGAA GCCACAAGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR005617--Groucho/TLE_N
IPR009146--Groucho_enhance
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF03920--TLE_N
PF00400--WD40

PRINTS

PR01850--GROUCHOFAMLY

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003552	Anas platyrhynchos	72.00	0.00e+00	977.00
IUUC-Aca-004967	Anolis carolinensis	74.91	0.00e+00	808.00
IUUC-Ame-010668	Astyanax mexicanus	95.47	0.00e+00	1021.00
IUUC-Dre-028293	Danio rerio	96.15	0.00e+00	995.00
IUUC-Fal-036893	Ficedula albicollis	73.80	0.00e+00	1047.00
IUUC-Gac-042241	Gasterosteus aculeatus	88.44	0.00e+00	1181.00
IUUC-Loc-052056	Lepisosteus oculatus	80.80	0.00e+00	862.00
IUUC-Ola-086892	Oryzias latipes	92.00	0.00e+00	1230.00
IUUC-Psi-092957	Pelodiscus sinensis	73.53	0.00e+00	804.00
IUUC-Pfo-096291	Poecilia formosa	98.40	0.00e+00	1033.00
IUUC-Tru-118532	Takifugu rubripes	96.50	0.00e+00	1038.00
IUUC-Tni-119942	Tetraodon nigroviridis	91.79	0.00e+00	1018.00
IUUC-Xtr-132704	Xenopus tropicalis	70.81	0.00e+00	1006.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence