iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ptr-090704

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03116696

Gene Name

STRN4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000011192.4	ENSPTRT00000020799.4	ENSPTRP00000019206.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.00e-28	96.0	537	570
UBD/Beta-Prp	5.40e-48	163.7	584	747

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH d v++laf ++  +l+s+s Dgt+++WD+++
   Q: 537  GHGDAVWGLAFsPTsQRLASCSADGTVRIWDPSS 570
           8***********7779***************765 PP

UBD/Beta-Prp

   S: 9    hksvitcvkf.spdksllatgsrdgtikvwdvttgkllrsl.sgheae...vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkg 92
           + +  t+v+f s +  ++++++r+g + ++d++ g++l +l s  +++   +++v  +p++++ +t+++Dr i+  d +tgk+vh++ +
   Q: 584  EHGIPTSVAFtSTEPAHIVASFRSGDTVLYDMEVGSALLTLeSRGSSGptqINQVVSHPNQPLTITAHDDRGIRFLDNRTGKPVHSMVA 672
           45678999**9999999********************88885444444566************************************** PP
   S: 93   hedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
           h d v++l+++p+g +l sGshd  +r+w l++++c++e     ++h++++  v+ hp++ l++s+++D   +++
   Q: 673  HLDAVTCLAVDPNGAFLMSGSHDCSLRLWSLDNKTCVQEitaHRKKHEEAIHAVACHPSKALIASAGADALAKVF 747
           ***************************************999999************************988887 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MMEERAAAAV AAAASSCRPL GSGAGPGPTG AAPVSAPAPG PGPAGKGGGG GGSPGPTAGP 60
EPLSLPGILH FIQHEWARFE AEKARWEAER AELQAQVAFL QGERKGQENL KTDLVRRIKM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGGAGG AGCGAGCGGC CGCAGCGGTC GCCGCCGCCG CCTCCTCCTG CCGTCCGCTC 60
GGCTCAGGCG CGGGCCCTGG CCCCACTGGG GCGGCCCCGG TCTCCGCCCC TGCCCCCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000159--C:protein phosphatase type 2A complex

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001946	Ailuropoda melanoleuca	78.13	0.00e+00	946.00
IUUC-Aca-004552	Anolis carolinensis	75.46	0.00e+00	951.00
IUUC-Acl-008170	Aspergillus clavatus	26.75	2.00e-27	117.00
IUUC-Bta-012550	Bos taurus	90.33	0.00e+00	1024.00
IUUC-Cja-018978	Callithrix jacchus	91.88	0.00e+00	912.00
IUUC-Cfa-020268	Canis familiaris	92.11	0.00e+00	1009.00
IUUC-Cpo-022102	Cavia porcellus	90.76	0.00e+00	1028.00
IUUC-Csa-023969	Chlorocebus sabaeus	95.26	0.00e+00	1134.00
IUUC-Dre-027638	Danio rerio	59.18	0.00e+00	753.00
IUUC-Dno-029256	Dasypus novemcinctus	97.26	0.00e+00	671.00
IUUC-Dor-031032	Dipodomys ordii	88.93	0.00e+00	1038.00
IUUC-Ete-033031	Echinops telfairi	78.44	4.00e-160	558.00
IUUC-Eca-033515	Equus caballus	90.40	0.00e+00	1030.00
IUUC-Eeu-035033	Erinaceus europaeus	80.66	4.00e-130	458.00
IUUC-Fca-035749	Felis catus	90.94	0.00e+00	1007.00
IUUC-Gmo-039274	Gadus morhua	58.01	0.00e+00	717.00
IUUC-Gac-042099	Gasterosteus aculeatus	58.23	0.00e+00	724.00
IUUC-Ggo-045406	Gorilla gorilla	96.00	0.00e+00	1102.00
IUUC-Hsa-046341	Homo sapiens	96.32	0.00e+00	1106.00
IUUC-Itr-048200	Ictidomys tridecemlineatus	92.05	0.00e+00	1040.00
IUUC-Lch-049604	Latimeria chalumnae	62.55	0.00e+00	803.00
IUUC-Loc-052671	Lepisosteus oculatus	55.99	0.00e+00	756.00
IUUC-Laf-054531	Loxodonta africana	91.61	0.00e+00	967.00
IUUC-Mcc-055737	Macaca mulatta	89.27	0.00e+00	1076.00
IUUC-Meu-056845	Macropus eugenii	83.83	0.00e+00	953.00
IUUC-Mmr-061153	Microcebus murinus	93.82	0.00e+00	1116.00
IUUC-Mdo-062739	Monodelphis domestica	79.45	0.00e+00	906.00
IUUC-Mmu-063564	Mus musculus	92.11	0.00e+00	1065.00
IUUC-Mpu-065794	Mustela putorius furo	91.07	0.00e+00	964.00
IUUC-Nfi-068560	Neosartorya fischeri	26.27	6.00e-27	116.00
IUUC-Nle-069587	Nomascus leucogenys	87.62	0.00e+00	1001.00
IUUC-Opr-071219	Ochotona princeps	70.47	0.00e+00	739.00
IUUC-Ont-071528	Oreochromis niloticus	53.91	0.00e+00	701.00
IUUC-Ocu-073953	Oryctolagus cuniculus	87.48	0.00e+00	877.00
IUUC-Ola-086888	Oryzias latipes	66.40	2.00e-152	532.00
IUUC-Oga-088280	Otolemur garnettii	93.55	0.00e+00	1095.00
IUUC-Oar-090381	Ovis aries	84.51	0.00e+00	905.00
IUUC-Pan-092058	Papio anubis	95.13	0.00e+00	1132.00
IUUC-Psi-093535	Pelodiscus sinensis	69.90	0.00e+00	627.00
IUUC-Pfo-096556	Poecilia formosa	58.05	0.00e+00	736.00
IUUC-Pab-098573	Pongo abelii	95.50	0.00e+00	1073.00
IUUC-Pca-100746	Procavia capensis	86.94	0.00e+00	926.00
IUUC-Pva-102823	Pteropus vampyrus	90.76	0.00e+00	1028.00
IUUC-Rno-105418	Rattus norvegicus	92.29	0.00e+00	1060.00
IUUC-Ssc-116050	Sus scrofa	93.37	0.00e+00	867.00
IUUC-Tru-117971	Takifugu rubripes	58.37	0.00e+00	746.00
IUUC-Tni-120522	Tetraodon nigroviridis	58.82	0.00e+00	752.00
IUUC-Tbe-128127	Tupaia belangeri	84.62	0.00e+00	760.00
IUUC-Ttr-128911	Tursiops truncatus	84.08	0.00e+00	941.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence