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Tag Content
iUUCD ID IUUC-Tae-125668
Ensembl Protein ID TRIAE_CS42_2BL_TGACv1_130608_AA0414690.3
UniProt Accession A0A1D5U0H2; A0A1D5U0H2_WHEAT
Protein Name Katanin p80 WD40 repeat-containing subunit B1 homolog
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
TRIAE_CS42_2BL_TGACv1_130608_AA0414690 TRIAE_CS42_2BL_TGACv1_130608_AA0414690.1 TRIAE_CS42_2BL_TGACv1_130608_AA0414690.1
TRIAE_CS42_2BL_TGACv1_130608_AA0414690 TRIAE_CS42_2BL_TGACv1_130608_AA0414690.2 TRIAE_CS42_2BL_TGACv1_130608_AA0414690.2
TRIAE_CS42_2BL_TGACv1_130608_AA0414690 TRIAE_CS42_2BL_TGACv1_130608_AA0414690.3 TRIAE_CS42_2BL_TGACv1_130608_AA0414690.3
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.70e-36 124.2 143 181
UBD/Beta-Prp 1.70e-56 194.2 16 278
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    gHt +v++++f +d + +vsG+ D +k+WDl+ g+ll+
   Q: 143 GHTRGVNAIRFtPDgRWVVSGGEDSAVKIWDLTAGKLLH 181
    8***********99999******************9987 PP
   


   UBD/Beta-Prp

   S: 8    hhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrt 75
    +h s ++c+k+ + +++l+tg++d+++ +w + +++ ++sl gh+++v +v f++++ + + g+ +t
   Q: 16 AHASNVNCLKIgRKTSRVLVTGGEDHKVNLWAIGKPNSISSLPGHTSAVESVAFDSTEVFVAAGAASGT 84
    68889999***999********************************************9999******* PP
   S: 76 ikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvv 144
    +k+wdl+ k+v+tl+gh ++ +s++f+p g++++sGs d +++wd++ + c++ t +gh++ vn ++
   Q: 85 VKLWDLEEAKIVRTLTGHRSNCMSVDFHPFGEFFASGSLDTNLKIWDIRRKGCIH-TYKGHTRGVNAIR 152
    *******************************************************.************* PP
   S: 145 vhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtge 213
    + pdg+ +vsG+ D++v++Wdl gkll+++++ h++++++++f++ + l++gs d+tvk+wdl+t e
   Q: 153 FTPDGRWVVSGGEDSAVKIWDLTAGKLLHEFKS-HEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFE 220
    ********************************9.*********************************** PP
   S: 214 cvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvav 272
    + + + v+s+ f p++ l++g ++s++++ + + t+ s+++ v
   Q: 221 LIGSTGPEMTGVRSMTFNPDGRSLLCG-LHESLKVFSWEPIRCHDTVDVGWSRLSDLNV 278
    ******************999999999.5888888766666666666666655555555 PP
   

Organism Triticum aestivum
Functional Description
(View)

Functional Description



     May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
Protein Sequence
(Fasta)
MTTNTKRAYK LQEFVAHASN VNCLKIGRKT SRVLVTGGED HKVNLWAIGK PNSISSLPGH 60
TSAVESVAFD STEVFVAAGA ASGTVKLWDL EEAKIVRTLT GHRSNCMSVD FHPFGEFFAS 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Tae-125668|E3,WD_repeat;UBD,Beta-Prp|Triticum aestivum
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATCGTCGGTG GATGACGNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 60
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNCCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Tae-125668|E3,WD_repeat;UBD,Beta-Prp|Triticum aestivum
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0206--Cytoskeleton
KW-0493--Microtubule
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR026962--Katanin_bsu1
IPR028021--Katanin_C-terminal
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF13925--Katanin_con80
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0008352--C:katanin complex
GO:0005874--C:microtubule
GO:0051013--P:microtubule severing

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aca-004635 Anolis carolinensis 50.00 1.00e-91 331.00
IUUC-Fca-035924 Felis catus 54.18 7.00e-104 372.00
IUUC-Loc-052623 Lepisosteus oculatus 51.90 2.00e-100 360.00
IUUC-Ocu-074644 Oryctolagus cuniculus 53.85 6.00e-104 372.00
IUUC-Olo-080245 Oryza longistaminata 76.51 0.00e+00 1395.00
IUUC-Ola-087483 Oryzias latipes 49.68 3.00e-94 340.00
Created Date 25-Jun-2017

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