iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ogl-077168

UUCD1 version

UUC-OrG-02172

Ensembl Protein ID

ORGLA03G0310400.1

UniProt Accession

I1PFF8; I1PFF8_ORYGL

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ORGLA03G0310400	ORGLA03G0310400.1	ORGLA03G0310400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-15	57.6	201	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd..tllvsGsdDgtikvWDlrtgv 34
           gHtd v+c+af   s+   +l+sG++D t+++WD+  g 
   Q: 201  GHTDFVSCIAFtclSEgpSFLLSGGGDSTVRLWDYINGC 239
           8************94455789*************86665 PP

Organism

Oryza glaberrima

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MEDAAVEEAE VSGGAAEFAP ALVAAHPLGR SVAVAVGPEL RVFDLKASSA VSLSDNSGGG 60
SHSDAIRAIS FSANGALFAS AGDDKLVKVW KTDSWCCIRT ITSEKRVSAV AISNDGTYVT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGACG CCGCGGTCGA GGAGGCCGAG GTGAGCGGCG GCGCGGCGGA GTTCGCGCCG 60
GCTCTCGTCG CCGCCCACCC GCTCGGCCGC TCCGTCGCCG TCGCCGTCGG GCCCGAGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0008618--P:7-methylguanosine metabolic process
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000556	Aegilops tauschii	78.12	4.00e-172	596.00
IUUC-Atr-002431	Amborella trichopoda	56.00	7.00e-35	138.00
IUUC-Apl-003975	Anas platyrhynchos	32.79	6.00e-26	110.00
IUUC-Aca-005170	Anolis carolinensis	30.71	3.00e-19	89.00
IUUC-Aly-005769	Arabidopsis lyrata	51.15	7.00e-115	406.00
IUUC-Ath-006733	Arabidopsis thaliana	49.18	2.00e-108	384.00
IUUC-Ame-010613	Astyanax mexicanus	30.68	1.00e-22	100.00
IUUC-Bgr-012067	Blumeria graminis	33.78	2.00e-16	80.10
IUUC-Bta-012788	Bos taurus	31.14	6.00e-27	114.00
IUUC-Bdi-014458	Brachypodium distachyon	84.62	0.00e+00	642.00
IUUC-Bol-016398	Brassica oleracea	49.89	3.00e-108	384.00
IUUC-Bra-016644	Brassica rapa	51.31	7.00e-108	384.00
IUUC-Cpo-021963	Cavia porcellus	35.82	1.00e-23	103.00
IUUC-Csa-024148	Chlorocebus sabaeus	34.48	6.00e-18	84.30
IUUC-Cne-026834	Cryptococcus neoformans	30.00	2.00e-20	93.20
IUUC-Dre-028427	Danio rerio	29.47	9.00e-25	107.00
IUUC-Dor-030522	Dipodomys ordii	32.79	1.00e-25	109.00
IUUC-Dme-032136	Drosophila melanogaster	27.18	3.00e-13	68.90
IUUC-Fca-035833	Felis catus	30.40	7.00e-24	103.00
IUUC-Fal-037497	Ficedula albicollis	31.50	5.00e-26	110.00
IUUC-Gga-040547	Gallus gallus	31.68	1.00e-24	106.00
IUUC-Gac-041761	Gasterosteus aculeatus	28.94	2.00e-23	102.00
IUUC-Gma-043722	Glycine max	52.25	3.00e-111	394.00
IUUC-Ggo-045340	Gorilla gorilla	33.33	3.00e-17	81.60
IUUC-Hsa-046403	Homo sapiens	33.71	4.00e-19	88.20
IUUC-Hvu-047643	Hordeum vulgare	82.69	0.00e+00	656.00
IUUC-Itr-048103	Ictidomys tridecemlineatus	33.47	3.00e-26	112.00
IUUC-Kpa-049283	Komagataella pastoris	35.04	1.00e-15	76.60
IUUC-Lch-050682	Latimeria chalumnae	33.33	6.00e-28	117.00
IUUC-Lpe-050712	Leersia perrieri	90.80	0.00e+00	772.00
IUUC-Loc-052599	Lepisosteus oculatus	33.47	8.00e-29	120.00
IUUC-Laf-054390	Loxodonta africana	32.78	1.00e-26	113.00
IUUC-Mcc-054747	Macaca mulatta	34.48	2.00e-18	85.90
IUUC-Mtr-058600	Medicago truncatula	50.23	7.00e-114	402.00
IUUC-Mla-059135	Melampsora laricipopulina	28.63	4.00e-18	85.10
IUUC-Mga-059876	Meleagris gallopavo	31.54	2.00e-24	105.00
IUUC-Mmr-061518	Microcebus murinus	29.96	3.00e-23	101.00
IUUC-Mac-065417	Musa acuminata	57.50	9.00e-130	455.00
IUUC-Nle-069914	Nomascus leucogenys	30.47	3.00e-15	75.50
IUUC-Ont-071555	Oreochromis niloticus	31.10	1.00e-24	106.00
IUUC-Oan-072951	Ornithorhynchus anatinus	32.13	2.00e-24	105.00
IUUC-Ocu-074679	Oryctolagus cuniculus	32.06	2.00e-20	92.40
IUUC-Oba-075355	Oryza barthii	93.08	0.00e+00	783.00
IUUC-Obr-076769	Oryza brachyantha	91.72	0.00e+00	818.00
IUUC-Ogu-078275	Oryza glumaepatula	92.60	0.00e+00	777.00
IUUC-Oin-079207	Oryza indica	100.00	0.00e+00	861.00
IUUC-Ome-081169	Oryza meridionalis	98.56	8.00e-120	422.00
IUUC-Oni-082437	Oryza nivara	92.84	0.00e+00	775.00
IUUC-Opu-084031	Oryza punctata	97.61	0.00e+00	837.00
IUUC-Oru-084380	Oryza rufipogon	92.84	0.00e+00	780.00
IUUC-Osa-085327	Oryza sativa	99.76	0.00e+00	858.00
IUUC-Ola-086716	Oryzias latipes	30.89	3.00e-22	98.60
IUUC-Olu-087708	Ostreococcus lucimarinus	33.71	3.00e-34	138.00
IUUC-Oar-090239	Ovis aries	32.40	6.00e-26	110.00
IUUC-Ptr-090851	Pan troglodytes	33.71	1.00e-17	83.60
IUUC-Pan-092558	Papio anubis	35.64	7.00e-18	84.00
IUUC-Psi-093792	Pelodiscus sinensis	30.58	5.00e-23	101.00
IUUC-Ppa-095757	Physcomitrella patens	42.45	2.00e-75	275.00
IUUC-Pfo-096465	Poecilia formosa	29.03	8.00e-23	100.00
IUUC-Pab-097722	Pongo abelii	33.73	4.00e-18	85.10
IUUC-Pop-098979	Populus trichocarpa	51.46	9.00e-114	402.00
IUUC-Pca-100753	Procavia capensis	34.59	1.00e-15	76.60
IUUC-Ppe-101515	Prunus persica	57.89	2.00e-129	454.00
IUUC-Sja-107780	Schizosaccharomyces japonicus	26.91	5.00e-16	78.20
IUUC-Spo-108251	Schizosaccharomyces pombe	28.14	9.00e-18	83.60
IUUC-Smo-108938	Selaginella moellendorffii	40.05	5.00e-72	264.00
IUUC-Sit-110020	Setaria italica	82.41	0.00e+00	701.00
IUUC-Sly-111543	Solanum lycopersicum	52.86	1.00e-123	435.00
IUUC-Stu-111925	Solanum tuberosum	51.95	5.00e-122	430.00
IUUC-Sbi-114061	Sorghum bicolor	81.11	0.00e+00	702.00
IUUC-Tgu-117321	Taeniopygia guttata	32.39	5.00e-22	97.40
IUUC-Tru-118454	Takifugu rubripes	29.35	3.00e-25	108.00
IUUC-Tni-119894	Tetraodon nigroviridis	31.33	5.00e-23	100.00
IUUC-Tca-121746	Theobroma cacao	54.94	1.00e-125	442.00
IUUC-Tae-123054	Triticum aestivum	82.97	0.00e+00	657.00
IUUC-Tur-126254	Triticum urartu	77.20	2.00e-158	550.00
IUUC-Tbe-127683	Tupaia belangeri	51.58	6.00e-16	77.80
IUUC-Ttr-129056	Tursiops truncatus	35.82	6.00e-25	107.00
IUUC-Vvi-131428	Vitis vinifera	52.40	9.00e-127	445.00
IUUC-Xma-133605	Xiphophorus maculatus	30.16	6.00e-22	97.40

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence