iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121848

Ensembl Protein ID

EOY20660

UniProt Accession

A0A061FTJ6; A0A061FTJ6_THECC

Genbank Protein ID

EOY20660.1

Protein Name

RING/U-box superfamily protein

Genbank Nucleotide ID

CM001881

Gene Name

TCM_012020

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_012020	EOY20660	EOY20660

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-07	31.7	140	182

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+++  +d +++lp C H+fh dC+  w         + +CPlCr
   Q: 140  CAVCLCEYsdQDKLRLLPmCSHAFHIDCIDTW------LLSNSTCPLCR 182
           ********77444*******************......888889****8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MLKMSRITNE IKQMMYPPPV SPLSSFPTPN YYNIDYYESS PPSPSIRISP VLLLIIVIFA 60
VIFFIAGLLH LLVRFLIKRP SFSPIYQSNR YPGNSESHGL QRQLQQLFRL HDSGLDQSVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACTTGGAGAA GGAGCGTAGT CGATGACAGT TGGTATCAGA GCGGACTCTG AGTACTAGTA 60
ATGTATTATT TAGGATAGTG AACTCTTGTT GAAGTAAGGA AGGATGTCAC GGTCTTCGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003834	Anas platyrhynchos	49.35	2.00e-15	77.00
IUUC-Cfa-020202	Canis familiaris	47.50	5.00e-17	82.00
IUUC-Fca-035572	Felis catus	44.44	9.00e-17	81.30
IUUC-Fal-036981	Ficedula albicollis	48.05	9.00e-16	77.80
IUUC-Gmo-039344	Gadus morhua	46.58	2.00e-14	73.60
IUUC-Gga-041114	Gallus gallus	49.35	1.00e-15	77.40
IUUC-Lch-050541	Latimeria chalumnae	47.37	3.00e-15	76.30
IUUC-Mga-059307	Meleagris gallopavo	49.35	3.00e-15	76.60
IUUC-Mlu-068129	Myotis lucifugus	43.75	2.00e-15	76.60
IUUC-Ont-071511	Oreochromis niloticus	43.02	1.00e-14	74.70
IUUC-Pfo-096517	Poecilia formosa	59.62	3.00e-15	75.50
IUUC-Pop-099711	Populus trichocarpa	61.85	2.00e-87	315.00
IUUC-Ppe-101908	Prunus persica	67.68	4.00e-109	387.00
IUUC-Sly-111405	Solanum lycopersicum	57.45	5.00e-80	290.00
IUUC-Stu-112609	Solanum tuberosum	56.67	2.00e-86	311.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence