iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-116482

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01030507

Gene Name

WDR53

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000005874.1	ENSTGUT00000006096.1	ENSTGUP00000006037.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-24	83.7	237	269

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H+ +v+ + f ++  +l+sG++Dg++ +WD+++
   Q: 237  HSLGVSQVLFmPEaYRLLSGGNDGKVLLWDVSS 269
           7788999999*99999**************976 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MAVKWSGGHS SSVLCLNVGA EGLVASGAER GELALWDGAG SPVAQLRLPP AEDVTSLVFS 60
ARRPSTLYTA HGETISVLDV RSLQEPLQRF HVNEEEINCL SLNDADSFLA AADDSGAIKV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGTGA AGTGGAGCGG CGGGCACTCC TCCTCTGTGC TGTGCCTGAA CGTGGGCGCG 60
GAGGGGCTGG TGGCCTCCGG CGCGGAGCGG GGCGAGCTGG CGCTGTGGGA CGGGGCAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	27.66	4.00e-15	75.90
IUUC-Aml-001203	Ailuropoda melanoleuca	66.95	1.00e-132	465.00
IUUC-Atr-002680	Amborella trichopoda	29.02	3.00e-23	102.00
IUUC-Apl-003656	Anas platyrhynchos	69.97	1.00e-134	472.00
IUUC-Aca-004987	Anolis carolinensis	63.28	3.00e-127	447.00
IUUC-Aly-006254	Arabidopsis lyrata	30.41	4.00e-29	121.00
IUUC-Ath-006632	Arabidopsis thaliana	28.52	1.00e-26	113.00
IUUC-Ame-011032	Astyanax mexicanus	46.92	1.00e-88	319.00
IUUC-Bta-012588	Bos taurus	65.07	2.00e-123	434.00
IUUC-Bdi-014532	Brachypodium distachyon	26.53	4.00e-25	108.00
IUUC-Bol-015542	Brassica oleracea	28.67	4.00e-18	86.70
IUUC-Bra-017046	Brassica rapa	29.59	1.00e-25	111.00
IUUC-Cja-019365	Callithrix jacchus	66.39	9.00e-140	489.00
IUUC-Cfa-021090	Canis familiaris	67.23	6.00e-135	473.00
IUUC-Cpo-021517	Cavia porcellus	65.08	9.00e-138	482.00
IUUC-Csa-023041	Chlorocebus sabaeus	64.71	3.00e-131	461.00
IUUC-Cho-024801	Choloepus hoffmanni	65.73	1.00e-136	478.00
IUUC-Dre-028437	Danio rerio	47.34	1.00e-84	306.00
IUUC-Dno-029267	Dasypus novemcinctus	66.29	4.00e-139	486.00
IUUC-Ete-032726	Echinops telfairi	53.78	6.00e-107	380.00
IUUC-Eca-033621	Equus caballus	66.38	4.00e-132	463.00
IUUC-Eeu-034461	Erinaceus europaeus	65.64	5.00e-129	453.00
IUUC-Fca-036410	Felis catus	66.20	2.00e-131	461.00
IUUC-Fal-036676	Ficedula albicollis	89.83	0.00e+00	628.00
IUUC-Gmo-039597	Gadus morhua	34.03	1.00e-16	80.50
IUUC-Gga-040760	Gallus gallus	83.67	1.00e-97	348.00
IUUC-Gac-041905	Gasterosteus aculeatus	50.68	2.00e-86	312.00
IUUC-Gma-044017	Glycine max	32.35	7.00e-20	90.90
IUUC-Ggo-044881	Gorilla gorilla	65.27	1.00e-131	462.00
IUUC-Hsa-046836	Homo sapiens	64.99	1.00e-130	458.00
IUUC-Hvu-047651	Hordeum vulgare	25.79	2.00e-24	106.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	64.71	9.00e-132	462.00
IUUC-Lch-050406	Latimeria chalumnae	53.53	2.00e-92	332.00
IUUC-Lpe-051023	Leersia perrieri	23.24	1.00e-15	77.00
IUUC-Loc-052878	Lepisosteus oculatus	54.62	1.00e-94	338.00
IUUC-Laf-053547	Loxodonta africana	64.71	5.00e-133	466.00
IUUC-Mcc-054646	Macaca mulatta	64.71	4.00e-131	460.00
IUUC-Meu-056381	Macropus eugenii	61.52	1.00e-130	458.00
IUUC-Mtr-058656	Medicago truncatula	25.81	3.00e-22	99.00
IUUC-Mmr-061601	Microcebus murinus	65.55	6.00e-138	483.00
IUUC-Mdo-062305	Monodelphis domestica	62.92	3.00e-136	477.00
IUUC-Mmu-063213	Mus musculus	64.53	3.00e-130	457.00
IUUC-Mac-064940	Musa acuminata	25.69	2.00e-26	112.00
IUUC-Mpu-066629	Mustela putorius furo	67.13	4.00e-134	470.00
IUUC-Nle-069860	Nomascus leucogenys	65.27	2.00e-131	461.00
IUUC-Opr-071180	Ochotona princeps	64.61	2.00e-106	378.00
IUUC-Ont-071912	Oreochromis niloticus	47.67	2.00e-91	328.00
IUUC-Ocu-074874	Oryctolagus cuniculus	66.39	5.00e-137	480.00
IUUC-Oba-075815	Oryza barthii	30.19	1.00e-16	80.10
IUUC-Obr-076835	Oryza brachyantha	34.81	5.00e-22	97.80
IUUC-Ogu-077977	Oryza glumaepatula	30.19	1.00e-16	80.10
IUUC-Oin-079206	Oryza indica	34.21	1.00e-23	103.00
IUUC-Olo-080621	Oryza longistaminata	29.35	7.00e-16	77.80
IUUC-Ome-081261	Oryza meridionalis	29.03	1.00e-14	73.60
IUUC-Opu-083256	Oryza punctata	28.80	3.00e-16	79.00
IUUC-Osa-085892	Oryza sativa	34.21	1.00e-23	103.00
IUUC-Ola-086701	Oryzias latipes	45.53	1.00e-84	306.00
IUUC-Oga-088152	Otolemur garnettii	64.89	3.00e-135	474.00
IUUC-Oar-089681	Ovis aries	65.55	3.00e-128	451.00
IUUC-Ptr-091142	Pan troglodytes	65.27	2.00e-131	461.00
IUUC-Pan-092435	Papio anubis	64.99	2.00e-124	438.00
IUUC-Psi-093255	Pelodiscus sinensis	72.73	2.00e-150	525.00
IUUC-Ppa-095829	Physcomitrella patens	31.23	1.00e-30	127.00
IUUC-Pfo-097339	Poecilia formosa	44.95	2.00e-80	292.00
IUUC-Pab-098274	Pongo abelii	64.43	3.00e-129	454.00
IUUC-Pop-099705	Populus trichocarpa	24.38	9.00e-25	107.00
IUUC-Pca-100451	Procavia capensis	65.07	2.00e-137	481.00
IUUC-Ppe-101220	Prunus persica	29.45	7.00e-28	117.00
IUUC-Pva-102385	Pteropus vampyrus	66.85	9.00e-135	472.00
IUUC-Rno-105765	Rattus norvegicus	64.80	2.00e-130	458.00
IUUC-Sha-106533	Sarcophilus harrisii	62.15	2.00e-131	461.00
IUUC-Smo-109248	Selaginella moellendorffii	26.33	7.00e-28	117.00
IUUC-Sit-110297	Setaria italica	38.89	3.00e-18	85.10
IUUC-Sly-111617	Solanum lycopersicum	30.05	4.00e-23	101.00
IUUC-Stu-112531	Solanum tuberosum	29.27	2.00e-22	99.40
IUUC-Sar-113647	Sorex araneus	66.57	2.00e-135	474.00
IUUC-Sbi-114621	Sorghum bicolor	26.79	5.00e-25	108.00
IUUC-Tru-118622	Takifugu rubripes	47.14	6.00e-82	296.00
IUUC-Tsy-119474	Tarsius syrichta	64.99	7.00e-135	473.00
IUUC-Tni-120250	Tetraodon nigroviridis	46.85	2.00e-73	268.00
IUUC-Tca-121583	Theobroma cacao	27.07	2.00e-29	122.00
IUUC-Tae-124680	Triticum aestivum	25.00	1.00e-22	100.00
IUUC-Tur-126076	Triticum urartu	21.74	2.00e-12	66.60
IUUC-Tbe-127545	Tupaia belangeri	64.79	1.00e-131	462.00
IUUC-Ttr-128497	Tursiops truncatus	64.99	6.00e-128	449.00
IUUC-Vpa-130772	Vicugna pacos	64.71	7.00e-130	456.00
IUUC-Vvi-131632	Vitis vinifera	25.63	2.00e-28	119.00
IUUC-Xma-133432	Xiphophorus maculatus	45.09	2.00e-84	305.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence