iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126076

Ensembl Protein ID

TRIUR3_07234-P1

UniProt Accession

M8A8K4; M8A8K4_TRIUA

Genbank Protein ID

EMS68376.1

Protein Name

WD repeat-containing protein 53

Genbank Nucleotide ID

KD007190

Gene Name

TRIUR3_07234

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_07234	TRIUR3_07234-T1	TRIUR3_07234-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-11	44.4	290	327

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sdtllvsGsdDgtikvWDlrtg 33
           gHt+ v+c+af      +++lvsG++D ++kvWD+++g
   Q: 290  GHTAAVSCVAFsafgeKGKFLVSGGNDASLKVWDWSKG 327
           8************9754499**************9887 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MSETETAAAA ATSTERKPRR LRGHKKGAVT CCVASSARPG VVASSGETSR LFPYVDLSIS 60
AQIAMDGCLC WFDLRTKDVL LTIEAANKPI SSICFKSGNE DHVYVSAGNE ILSFDIRMGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCGAGA CAGAAACGGC GGCGGCGGCG GCGACGTCGA CGGAGCGGAA GCCCCGGCGG 60
CTGCGGGGGC ACAAGAAGGG CGCCGTCACC TGCTGCGTAG CGTCCTCCGC CCGCCCGGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000124	Aegilops tauschii	86.41	1.00e-172	598.00
IUUC-Aml-001203	Ailuropoda melanoleuca	23.41	5.00e-16	77.40
IUUC-Atr-002680	Amborella trichopoda	49.84	2.00e-78	285.00
IUUC-Apl-003656	Anas platyrhynchos	23.79	2.00e-13	68.90
IUUC-Aca-004987	Anolis carolinensis	24.35	2.00e-14	72.40
IUUC-Aly-006254	Arabidopsis lyrata	46.06	5.00e-87	313.00
IUUC-Ath-006632	Arabidopsis thaliana	45.55	4.00e-88	317.00
IUUC-Bta-012588	Bos taurus	24.61	1.00e-17	82.80
IUUC-Bdi-014532	Brachypodium distachyon	78.41	6.00e-163	565.00
IUUC-Bol-015542	Brassica oleracea	48.10	3.00e-86	312.00
IUUC-Bra-017046	Brassica rapa	47.35	1.00e-84	306.00
IUUC-Cja-019365	Callithrix jacchus	23.41	1.00e-15	76.30
IUUC-Cfa-021090	Canis familiaris	22.83	8.00e-15	73.60
IUUC-Cpo-021517	Cavia porcellus	23.05	1.00e-13	69.70
IUUC-Csa-023041	Chlorocebus sabaeus	21.97	4.00e-14	71.20
IUUC-Cho-024801	Choloepus hoffmanni	22.03	3.00e-15	74.70
IUUC-Dno-029267	Dasypus novemcinctus	22.32	3.00e-14	71.60
IUUC-Ete-032726	Echinops telfairi	19.65	1.00e-06	46.20
IUUC-Eca-033621	Equus caballus	24.06	2.00e-15	75.50
IUUC-Eeu-034461	Erinaceus europaeus	25.95	3.00e-15	75.10
IUUC-Fca-036410	Felis catus	24.06	2.00e-15	75.90
IUUC-Fal-036676	Ficedula albicollis	23.99	3.00e-14	71.60
IUUC-Gac-041905	Gasterosteus aculeatus	23.56	1.00e-16	79.70
IUUC-Gma-044017	Glycine max	43.85	2.00e-72	265.00
IUUC-Ggo-044881	Gorilla gorilla	22.25	1.00e-14	73.20
IUUC-Hsa-046836	Homo sapiens	22.25	3.00e-15	74.70
IUUC-Hvu-047651	Hordeum vulgare	82.26	4.00e-174	603.00
IUUC-Itr-048206	Ictidomys tridecemlineatus	23.99	1.00e-16	79.30
IUUC-Lch-050406	Latimeria chalumnae	22.10	7.00e-09	53.90
IUUC-Lpe-051023	Leersia perrieri	68.21	7.00e-136	476.00
IUUC-Loc-052878	Lepisosteus oculatus	24.27	4.00e-15	74.70
IUUC-Laf-053547	Loxodonta africana	25.76	3.00e-14	71.60
IUUC-Mcc-054646	Macaca mulatta	21.68	1.00e-13	69.70
IUUC-Meu-056381	Macropus eugenii	24.70	1.00e-10	59.70
IUUC-Mtr-058656	Medicago truncatula	43.00	2.00e-74	271.00
IUUC-Mmr-061601	Microcebus murinus	23.70	3.00e-16	78.20
IUUC-Mac-064940	Musa acuminata	53.32	6.00e-111	392.00
IUUC-Mpu-066629	Mustela putorius furo	22.61	3.00e-15	74.70
IUUC-Nle-069860	Nomascus leucogenys	22.54	8.00e-16	77.00
IUUC-Ont-071912	Oreochromis niloticus	24.06	1.00e-12	66.60
IUUC-Ocu-074874	Oryctolagus cuniculus	22.83	8.00e-15	73.60
IUUC-Oba-075815	Oryza barthii	68.72	1.00e-140	491.00
IUUC-Obr-076835	Oryza brachyantha	72.36	1.00e-119	421.00
IUUC-Ogu-077977	Oryza glumaepatula	67.18	4.00e-137	479.00
IUUC-Oin-079206	Oryza indica	72.24	3.00e-152	530.00
IUUC-Olo-080621	Oryza longistaminata	73.11	3.00e-150	523.00
IUUC-Ome-081261	Oryza meridionalis	71.12	3.00e-140	490.00
IUUC-Oni-082280	Oryza nivara	64.54	2.00e-115	407.00
IUUC-Opu-083256	Oryza punctata	68.46	2.00e-137	481.00
IUUC-Oru-084531	Oryza rufipogon	70.72	2.00e-133	468.00
IUUC-Osa-085892	Oryza sativa	72.24	3.00e-152	530.00
IUUC-Olu-087593	Ostreococcus lucimarinus	29.83	2.00e-09	55.80
IUUC-Oga-088152	Otolemur garnettii	22.90	1.00e-14	73.20
IUUC-Oar-089681	Ovis aries	23.41	3.00e-16	78.20
IUUC-Ptr-091142	Pan troglodytes	22.25	5.00e-15	74.30
IUUC-Pan-092435	Papio anubis	21.97	4.00e-14	71.20
IUUC-Psi-093255	Pelodiscus sinensis	22.67	9.00e-12	63.50
IUUC-Ppa-095829	Physcomitrella patens	35.61	4.00e-52	197.00
IUUC-Pfo-097339	Poecilia formosa	24.06	4.00e-13	68.20
IUUC-Pab-098274	Pongo abelii	22.54	5.00e-14	70.90
IUUC-Pop-099705	Populus trichocarpa	42.78	1.00e-77	281.00
IUUC-Pca-100451	Procavia capensis	23.99	6.00e-15	73.90
IUUC-Ppe-101220	Prunus persica	48.21	1.00e-97	348.00
IUUC-Pva-102385	Pteropus vampyrus	23.77	3.00e-16	78.60
IUUC-Sha-106533	Sarcophilus harrisii	23.16	1.00e-13	69.70
IUUC-Smo-108698	Selaginella moellendorffii	34.42	2.00e-50	191.00
IUUC-Sit-110297	Setaria italica	77.27	8.00e-117	412.00
IUUC-Sly-111617	Solanum lycopersicum	48.22	8.00e-89	319.00
IUUC-Stu-112531	Solanum tuberosum	48.48	1.00e-89	322.00
IUUC-Sar-113647	Sorex araneus	21.45	5.00e-12	64.30
IUUC-Sbi-114621	Sorghum bicolor	77.52	2.00e-170	590.00
IUUC-Tgu-116482	Taeniopygia guttata	22.03	1.00e-08	53.10
IUUC-Tru-118622	Takifugu rubripes	22.44	2.00e-11	62.80
IUUC-Tsy-119474	Tarsius syrichta	21.97	5.00e-13	67.80
IUUC-Tca-121583	Theobroma cacao	48.97	2.00e-98	351.00
IUUC-Tae-124680	Triticum aestivum	86.63	0.00e+00	629.00
IUUC-Tbe-127545	Tupaia belangeri	23.41	3.00e-15	75.10
IUUC-Ttr-128497	Tursiops truncatus	24.24	3.00e-14	72.00
IUUC-Vpa-130772	Vicugna pacos	22.77	5.00e-16	77.40
IUUC-Vvi-131632	Vitis vinifera	49.49	2.00e-101	361.00
IUUC-Xma-133432	Xiphophorus maculatus	21.79	2.00e-12	65.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence