iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048948

Ensembl Protein ID

ENSSTOP00000013372.2

UniProt Accession

I3MNU2; I3MNU2_ICTTR

Genbank Protein ID

ENSSTOP00000013372

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01068716

Gene Name

MED16

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000014930.2	ENSSTOT00000014927.2	ENSSTOP00000013372.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-06	25.8	70	102

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrt 32
           H + +tcl++  s+ +l+s+  Dg+ik+W++ +
   Q: 70   HREAITCLEWdqSGSRLLSADADGQIKCWSMAD 102
           999*******965599*************9765 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

GTMDLAYVCE WEKWPKSTHC PSVPLACAWS CRNLIAFTTD LRSDDQDLTR TIHILDTEHP 60
WDVHSISSQH REAITCLEWD QSGSRLLSAD ADGQIKCWSM ADHLANSWES CLGSMVEGDP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCACGATGG ACCTGGCCTA CGTCTGTGAG TGGGAGAAGT GGCCCAAGAG CACCCACTGC 60
CCATCAGTGC CCCTGGCCTG TGCCTGGTCC TGCCGCAACC TCATTGCCTT CACCACGGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR021665--Mediator_Med16
IPR011041--Quinoprot_gluc/sorb_DH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF11635--Med16

SMART

SM00320--WD40

Gene Ontology

GO:0016592--C:mediator complex
GO:0016020--C:membrane
GO:0003824--F:catalytic activity
GO:0004872--F:receptor activity
GO:0030375--F:thyroid hormone receptor coactivator activity
GO:0030521--P:androgen receptor signaling pathway
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0006367--P:transcription initiation from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011407	Astyanax mexicanus	72.12	0.00e+00	1171.00
IUUC-Bta-012729	Bos taurus	91.94	0.00e+00	1499.00
IUUC-Cja-019000	Callithrix jacchus	94.62	4.00e-96	343.00
IUUC-Cfa-020876	Canis familiaris	94.33	0.00e+00	1549.00
IUUC-Cpo-021655	Cavia porcellus	93.59	0.00e+00	1517.00
IUUC-Dre-027473	Danio rerio	75.21	0.00e+00	1238.00
IUUC-Dno-029564	Dasypus novemcinctus	91.90	0.00e+00	1042.00
IUUC-Eca-033914	Equus caballus	94.72	0.00e+00	911.00
IUUC-Fca-036338	Felis catus	95.03	0.00e+00	840.00
IUUC-Fal-037249	Ficedula albicollis	84.42	0.00e+00	1441.00
IUUC-Gmo-039447	Gadus morhua	72.12	1.00e-165	576.00
IUUC-Gga-041100	Gallus gallus	84.93	0.00e+00	1362.00
IUUC-Gac-042603	Gasterosteus aculeatus	73.27	2.00e-159	556.00
IUUC-Ggo-044794	Gorilla gorilla	94.72	0.00e+00	1146.00
IUUC-Hsa-045722	Homo sapiens	93.96	0.00e+00	835.00
IUUC-Loc-052871	Lepisosteus oculatus	78.43	0.00e+00	1277.00
IUUC-Mcc-055201	Macaca mulatta	95.36	0.00e+00	1147.00
IUUC-Mga-059807	Meleagris gallopavo	81.95	0.00e+00	1356.00
IUUC-Mmr-060781	Microcebus murinus	92.81	0.00e+00	1538.00
IUUC-Mpu-066388	Mustela putorius furo	93.85	0.00e+00	1535.00
IUUC-Ont-072316	Oreochromis niloticus	76.99	0.00e+00	1241.00
IUUC-Ola-086721	Oryzias latipes	75.21	0.00e+00	1200.00
IUUC-Oga-088875	Otolemur garnettii	95.48	0.00e+00	1538.00
IUUC-Oar-090444	Ovis aries	93.26	0.00e+00	1529.00
IUUC-Ptr-091117	Pan troglodytes	95.19	0.00e+00	823.00
IUUC-Pan-091807	Papio anubis	95.18	0.00e+00	1466.00
IUUC-Pfo-097356	Poecilia formosa	76.63	0.00e+00	1243.00
IUUC-Pab-097953	Pongo abelii	92.62	0.00e+00	1113.00
IUUC-Pca-100896	Procavia capensis	93.99	0.00e+00	1504.00
IUUC-Rno-105038	Rattus norvegicus	93.01	0.00e+00	1518.00
IUUC-Tgu-116750	Taeniopygia guttata	83.86	0.00e+00	1436.00
IUUC-Tru-118405	Takifugu rubripes	76.11	0.00e+00	1266.00
IUUC-Tni-120217	Tetraodon nigroviridis	77.58	0.00e+00	950.00
IUUC-Ttr-129222	Tursiops truncatus	93.64	0.00e+00	1508.00
IUUC-Xtr-132084	Xenopus tropicalis	80.56	0.00e+00	1270.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence