iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114122

Ensembl Protein ID

Sb07g024580.1

UniProt Accession

C5YNB8; C5YNB8_SORBI

Genbank Protein ID

EES15208.1; KXG25419.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766; CM000766

Gene Name

SORBI_007G173700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g024580	Sb07g024580.1	Sb07g024580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.10e-11	43.0	314	341

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikv 27
           +ds++++a+  +d  l++s s+Dg + +
   Q: 314  EDSIYGIAWssHDpSLFASLSYDGRVVL 341
           699*******977899********9976 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MQGGSSGIVY GGLKYQARCI ADVRADAGST TFLAGTLSLK EENEVHLIRL SPAEGELVCD 60
GLFYHPDEIW DLKSCPFDHR IFSTVYTSGE GYGASVWKMP EVNGQSNSPQ LDQLFELSGH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGCGAGCG ATCAGCGGCG TCGCCGCGCG GATCCGAAGC GCGCGCGAGA ATGCAGGGCG 60
GATCCAGCGG CATCGTCTAT GGCGGCCTCA AGTACCAGGC AAGCAAAGCA GCAGCGGCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_07g024580

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001118	Aegilops tauschii	85.33	3.00e-150	523.00
IUUC-Aml-002348	Ailuropoda melanoleuca	36.63	9.00e-35	139.00
IUUC-Atr-003028	Amborella trichopoda	62.24	1.00e-127	448.00
IUUC-Apl-004211	Anas platyrhynchos	31.03	1.00e-45	176.00
IUUC-Aca-004893	Anolis carolinensis	33.69	9.00e-50	189.00
IUUC-Aly-005975	Arabidopsis lyrata	65.24	8.00e-136	475.00
IUUC-Ath-007527	Arabidopsis thaliana	64.96	1.00e-136	478.00
IUUC-Ame-010619	Astyanax mexicanus	34.30	7.00e-51	193.00
IUUC-Bta-013035	Bos taurus	34.39	5.00e-49	187.00
IUUC-Bdi-014619	Brachypodium distachyon	88.03	2.00e-180	624.00
IUUC-Bol-016581	Brassica oleracea	64.67	7.00e-135	472.00
IUUC-Bra-017467	Brassica rapa	64.67	4.00e-135	473.00
IUUC-Cel-018344	Caenorhabditis elegans	26.32	2.00e-30	125.00
IUUC-Cja-018975	Callithrix jacchus	32.92	1.00e-48	186.00
IUUC-Cfa-020214	Canis familiaris	33.69	9.00e-46	176.00
IUUC-Cpo-021363	Cavia porcellus	34.22	4.00e-47	181.00
IUUC-Cre-022554	Chlamydomonas reinhardtii	30.55	8.00e-39	153.00
IUUC-Csa-023240	Chlorocebus sabaeus	34.75	5.00e-48	184.00
IUUC-Cho-024713	Choloepus hoffmanni	33.33	3.00e-44	171.00
IUUC-Cin-025678	Ciona intestinalis	29.78	6.00e-40	157.00
IUUC-Csv-026022	Ciona savignyi	30.71	2.00e-41	162.00
IUUC-Dre-027817	Danio rerio	33.95	7.00e-52	196.00
IUUC-Dno-030097	Dasypus novemcinctus	34.48	1.00e-47	182.00
IUUC-Dme-031866	Drosophila melanogaster	28.99	2.00e-38	151.00
IUUC-Ete-032575	Echinops telfairi	28.23	5.00e-27	114.00
IUUC-Eca-034323	Equus caballus	32.84	6.00e-32	130.00
IUUC-Eeu-035217	Erinaceus europaeus	27.95	9.00e-26	110.00
IUUC-Fca-035709	Felis catus	33.45	2.00e-39	155.00
IUUC-Fal-036989	Ficedula albicollis	33.16	1.00e-48	186.00
IUUC-Gmo-038623	Gadus morhua	30.63	1.00e-45	176.00
IUUC-Gga-040157	Gallus gallus	33.95	5.00e-51	194.00
IUUC-Gac-041368	Gasterosteus aculeatus	30.09	2.00e-18	85.50
IUUC-Gma-044196	Glycine max	61.54	7.00e-130	456.00
IUUC-Ggo-044513	Gorilla gorilla	32.84	2.00e-45	175.00
IUUC-Hsa-046844	Homo sapiens	32.67	1.00e-45	176.00
IUUC-Hvu-047435	Hordeum vulgare	90.03	0.00e+00	632.00
IUUC-Itr-048726	Ictidomys tridecemlineatus	37.45	7.00e-38	149.00
IUUC-Lch-049696	Latimeria chalumnae	32.45	9.00e-51	193.00
IUUC-Lpe-050988	Leersia perrieri	88.19	2.00e-137	481.00
IUUC-Loc-052440	Lepisosteus oculatus	33.68	3.00e-50	191.00
IUUC-Laf-054088	Loxodonta africana	34.57	1.00e-47	182.00
IUUC-Mcc-055575	Macaca mulatta	32.09	1.00e-42	166.00
IUUC-Meu-056807	Macropus eugenii	38.86	1.00e-30	126.00
IUUC-Mtr-058599	Medicago truncatula	62.96	8.00e-132	462.00
IUUC-Mga-059336	Meleagris gallopavo	33.42	5.00e-47	180.00
IUUC-Mmr-061706	Microcebus murinus	34.48	2.00e-51	195.00
IUUC-Mdo-062736	Monodelphis domestica	33.42	6.00e-46	177.00
IUUC-Mmu-064265	Mus musculus	34.84	7.00e-53	200.00
IUUC-Mac-065342	Musa acuminata	71.51	2.00e-147	513.00
IUUC-Mpu-066514	Mustela putorius furo	33.77	2.00e-48	185.00
IUUC-Mlu-067072	Myotis lucifugus	38.30	4.00e-32	130.00
IUUC-Nle-069307	Nomascus leucogenys	30.94	8.00e-38	150.00
IUUC-Opr-070283	Ochotona princeps	29.10	3.00e-30	125.00
IUUC-Ont-072532	Oreochromis niloticus	32.72	2.00e-47	182.00
IUUC-Oan-073222	Ornithorhynchus anatinus	32.35	2.00e-44	172.00
IUUC-Oba-075849	Oryza barthii	82.76	5.00e-150	523.00
IUUC-Obr-076488	Oryza brachyantha	87.11	9.00e-163	565.00
IUUC-Ogl-077928	Oryza glaberrima	85.00	3.00e-157	546.00
IUUC-Ogu-077997	Oryza glumaepatula	82.45	2.00e-151	527.00
IUUC-Oin-079848	Oryza indica	84.91	8.00e-156	541.00
IUUC-Oni-082492	Oryza nivara	82.76	7.00e-150	522.00
IUUC-Oru-085119	Oryza rufipogon	82.76	5.00e-150	523.00
IUUC-Osa-086152	Oryza sativa	85.22	2.00e-156	544.00
IUUC-Ola-086694	Oryzias latipes	31.14	1.00e-47	182.00
IUUC-Olu-087749	Ostreococcus lucimarinus	40.68	6.00e-23	99.80
IUUC-Oga-088180	Otolemur garnettii	36.24	2.00e-38	151.00
IUUC-Oar-089621	Ovis aries	27.67	6.00e-29	120.00
IUUC-Ptr-091053	Pan troglodytes	33.33	2.00e-44	172.00
IUUC-Pan-091918	Papio anubis	34.48	4.00e-47	181.00
IUUC-Psi-093545	Pelodiscus sinensis	34.30	9.00e-49	186.00
IUUC-Pma-094439	Petromyzon marinus	30.49	8.00e-47	180.00
IUUC-Pfo-096127	Poecilia formosa	32.37	5.00e-48	184.00
IUUC-Pab-097916	Pongo abelii	33.25	6.00e-44	170.00
IUUC-Pop-098864	Populus trichocarpa	62.78	6.00e-132	462.00
IUUC-Pca-100797	Procavia capensis	39.80	1.00e-32	132.00
IUUC-Ppe-101796	Prunus persica	66.19	4.00e-137	479.00
IUUC-Pva-103228	Pteropus vampyrus	31.68	2.00e-44	172.00
IUUC-Rno-104877	Rattus norvegicus	34.93	9.00e-50	189.00
IUUC-Sha-106940	Sarcophilus harrisii	33.16	2.00e-48	185.00
IUUC-Smo-109355	Selaginella moellendorffii	47.32	5.00e-92	330.00
IUUC-Sit-109958	Setaria italica	90.88	0.00e+00	653.00
IUUC-Sly-111871	Solanum lycopersicum	64.10	3.00e-137	480.00
IUUC-Stu-112128	Solanum tuberosum	64.39	3.00e-136	477.00
IUUC-Sar-113084	Sorex araneus	31.13	7.00e-15	73.60
IUUC-Ssc-115385	Sus scrofa	33.25	4.00e-45	174.00
IUUC-Tgu-117090	Taeniopygia guttata	32.61	7.00e-46	177.00
IUUC-Tru-118548	Takifugu rubripes	31.54	7.00e-50	190.00
IUUC-Tsy-119435	Tarsius syrichta	31.44	2.00e-43	168.00
IUUC-Tni-120311	Tetraodon nigroviridis	29.47	2.00e-34	139.00
IUUC-Tca-121141	Theobroma cacao	64.77	2.00e-133	468.00
IUUC-Tae-122717	Triticum aestivum	89.46	0.00e+00	629.00
IUUC-Tbe-127623	Tupaia belangeri	37.04	5.00e-11	60.80
IUUC-Ttr-128706	Tursiops truncatus	32.46	7.00e-28	117.00
IUUC-Vvi-130871	Vitis vinifera	65.91	2.00e-137	481.00
IUUC-Xtr-131950	Xenopus tropicalis	34.22	4.00e-52	197.00
IUUC-Xma-133364	Xiphophorus maculatus	31.84	4.00e-47	181.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence