iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sja-107723

Ensembl Protein ID

EEB08271

UniProt Accession

B6K464; B6K464_SCHJY

Genbank Protein ID

EEB08271.1

Protein Name

WD repeat protein Cdt2

Genbank Nucleotide ID

KE651167

Gene Name

SJAG_03417

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SJAG_03417	EEB08271	EEB08271

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.50e-26	87.0	449	478

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWD 29
           gH  +vt++a+ +++ l+s sdDgt++vW+
   Q: 449  GHGKDVTAVAWsNEDQLASISDDGTVRVWN 478
           899********655***************9 PP

Organism

Schizosaccharomyces japonicus

Protein Sequence
(Fasta)

MRILPSTNHK TTSMRLSSPV QDTVLGVLSD ITETSNNAVL RTPESSPAAP SKKHKLWDFP 60
ELDGNGSKAR KKLFQRTPIL HKPPKKPVRH ASIATELLQR GLGISRGINI RDTNITGSRF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAATGGAAT GCGTATTCTA CCAAGCACAA ATCACAAAAC CACAAGCATG AGGTTGTCTT 60
CTCCCGTGCA GGATACTGTC CTCGGAGTGC TGTCCGATAT TACAGAAACC TCAAATAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005634--C:nucleus
GO:0006279--P:premeiotic DNA replication
GO:2000058--P:regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002111	Ailuropoda melanoleuca	26.85	7.00e-26	110.00
IUUC-Atr-003097	Amborella trichopoda	30.11	2.00e-33	134.00
IUUC-Apl-004088	Anas platyrhynchos	27.63	1.00e-26	112.00
IUUC-Aca-004732	Anolis carolinensis	26.02	2.00e-26	112.00
IUUC-Aly-005686	Arabidopsis lyrata	28.93	1.00e-29	122.00
IUUC-Ath-006970	Arabidopsis thaliana	30.10	2.00e-27	115.00
IUUC-Acl-008219	Aspergillus clavatus	28.36	2.00e-39	155.00
IUUC-Afl-008558	Aspergillus flavus	34.60	2.00e-21	94.00
IUUC-Afu-008784	Aspergillus fumigatus	28.83	1.00e-34	139.00
IUUC-Ani-009304	Aspergillus nidulans	27.37	1.00e-30	126.00
IUUC-Ang-009842	Aspergillus niger	28.36	1.00e-38	152.00
IUUC-Aor-009883	Aspergillus oryzae	29.12	1.00e-35	142.00
IUUC-Ate-010454	Aspergillus terreus	31.49	5.00e-30	123.00
IUUC-Ame-010949	Astyanax mexicanus	25.92	3.00e-29	121.00
IUUC-Bta-012333	Bos taurus	27.87	3.00e-26	111.00
IUUC-Bci-013733	Botrytis cinerea	27.53	1.00e-30	125.00
IUUC-Bdi-014494	Brachypodium distachyon	31.28	5.00e-33	133.00
IUUC-Bol-015301	Brassica oleracea	30.64	2.00e-34	138.00
IUUC-Bra-017691	Brassica rapa	31.59	9.00e-34	135.00
IUUC-Cel-018498	Caenorhabditis elegans	22.14	3.00e-18	85.10
IUUC-Cja-019534	Callithrix jacchus	26.83	1.00e-25	109.00
IUUC-Cfa-020847	Canis familiaris	26.58	7.00e-26	110.00
IUUC-Cpo-021695	Cavia porcellus	26.98	2.00e-25	108.00
IUUC-Cre-022762	Chlamydomonas reinhardtii	28.21	1.00e-27	117.00
IUUC-Csa-023748	Chlorocebus sabaeus	27.32	2.00e-27	115.00
IUUC-Cho-024445	Choloepus hoffmanni	26.67	6.00e-17	80.90
IUUC-Cgl-026664	Colletotrichum gloeosporioides	25.64	2.00e-21	95.50
IUUC-Cne-027008	Cryptococcus neoformans	26.29	2.00e-18	86.70
IUUC-Dre-027536	Danio rerio	29.22	4.00e-33	134.00
IUUC-Dno-030035	Dasypus novemcinctus	27.62	4.00e-27	114.00
IUUC-Dse-031354	Dothistroma septosporum	28.54	6.00e-35	140.00
IUUC-Dme-031691	Drosophila melanogaster	28.21	3.00e-26	111.00
IUUC-Ete-032814	Echinops telfairi	27.46	4.00e-13	68.20
IUUC-Eca-033332	Equus caballus	27.40	6.00e-27	114.00
IUUC-Fca-035571	Felis catus	27.12	8.00e-27	113.00
IUUC-Fal-037421	Ficedula albicollis	27.62	2.00e-26	112.00
IUUC-Fox-038069	Fusarium oxysporum	27.29	3.00e-31	127.00
IUUC-Fso-038192	Fusarium solani	27.20	2.00e-31	128.00
IUUC-Gmo-039365	Gadus morhua	26.80	4.00e-30	124.00
IUUC-Ggr-039904	Gaeumannomyces graminis	27.77	1.00e-27	116.00
IUUC-Gga-041153	Gallus gallus	27.17	2.00e-26	112.00
IUUC-Gac-041984	Gasterosteus aculeatus	27.32	3.00e-30	124.00
IUUC-Gma-043734	Glycine max	29.67	7.00e-30	122.00
IUUC-Ggo-044419	Gorilla gorilla	27.25	3.00e-26	111.00
IUUC-Hsa-045862	Homo sapiens	27.52	5.00e-27	114.00
IUUC-Hvu-047728	Hordeum vulgare	34.08	2.00e-40	157.00
IUUC-Itr-048786	Ictidomys tridecemlineatus	27.67	3.00e-27	114.00
IUUC-Lch-050616	Latimeria chalumnae	26.07	3.00e-26	111.00
IUUC-Lpe-051222	Leersia perrieri	33.88	1.00e-37	149.00
IUUC-Loc-052564	Lepisosteus oculatus	27.78	2.00e-28	118.00
IUUC-Lma-053098	Leptosphaeria maculans	27.05	4.00e-37	147.00
IUUC-Laf-053892	Loxodonta africana	27.25	6.00e-27	114.00
IUUC-Mcc-055854	Macaca mulatta	27.32	2.00e-27	115.00
IUUC-Mor-057144	Magnaporthe oryzae	26.00	6.00e-27	114.00
IUUC-Mpo-057501	Magnaporthe poae	27.68	6.00e-24	103.00
IUUC-Mtr-058510	Medicago truncatula	31.39	2.00e-36	144.00
IUUC-Mla-058823	Melampsora laricipopulina	29.29	3.00e-27	114.00
IUUC-Mga-060128	Meleagris gallopavo	26.78	2.00e-26	112.00
IUUC-Mvi-060475	Microbotryum violaceum	31.26	7.00e-44	169.00
IUUC-Mmr-061331	Microcebus murinus	27.42	5.00e-26	110.00
IUUC-Mdo-063020	Monodelphis domestica	29.08	1.00e-30	126.00
IUUC-Mmu-063713	Mus musculus	26.58	4.00e-25	107.00
IUUC-Mac-064653	Musa acuminata	29.48	4.00e-30	124.00
IUUC-Mpu-066490	Mustela putorius furo	26.85	4.00e-26	111.00
IUUC-Mlu-067900	Myotis lucifugus	25.83	3.00e-25	108.00
IUUC-Nfi-068433	Neosartorya fischeri	29.00	8.00e-35	140.00
IUUC-Ncr-068776	Neurospora crassa	29.21	5.00e-34	137.00
IUUC-Nle-069675	Nomascus leucogenys	27.35	7.00e-24	103.00
IUUC-Ont-071441	Oreochromis niloticus	27.05	8.00e-30	123.00
IUUC-Oan-072757	Ornithorhynchus anatinus	29.20	4.00e-31	127.00
IUUC-Ocu-074670	Oryctolagus cuniculus	27.25	1.00e-26	113.00
IUUC-Oba-075844	Oryza barthii	33.15	4.00e-38	150.00
IUUC-Obr-076625	Oryza brachyantha	33.43	1.00e-38	151.00
IUUC-Ogl-077771	Oryza glaberrima	33.15	5.00e-38	150.00
IUUC-Ogu-078475	Oryza glumaepatula	31.40	6.00e-31	126.00
IUUC-Oin-079958	Oryza indica	33.15	6.00e-38	149.00
IUUC-Olo-080311	Oryza longistaminata	33.87	4.00e-32	130.00
IUUC-Ome-081985	Oryza meridionalis	32.87	5.00e-37	146.00
IUUC-Oni-082921	Oryza nivara	33.15	6.00e-38	149.00
IUUC-Opu-083174	Oryza punctata	31.79	2.00e-36	145.00
IUUC-Oru-084338	Oryza rufipogon	33.15	5.00e-38	150.00
IUUC-Oga-088358	Otolemur garnettii	27.60	2.00e-26	112.00
IUUC-Oar-089994	Ovis aries	27.87	1.00e-26	113.00
IUUC-Ptr-091338	Pan troglodytes	27.52	5.00e-27	114.00
IUUC-Pan-091759	Papio anubis	27.06	2.00e-26	112.00
IUUC-Psi-093211	Pelodiscus sinensis	27.95	1.00e-29	122.00
IUUC-Pma-094588	Petromyzon marinus	28.81	1.00e-18	85.10
IUUC-Pno-094964	Phaeosphaeria nodorum	27.49	1.00e-39	155.00
IUUC-Ppa-095159	Physcomitrella patens	30.66	2.00e-33	134.00
IUUC-Pfo-096592	Poecilia formosa	26.42	5.00e-26	110.00
IUUC-Pop-099255	Populus trichocarpa	30.99	4.00e-33	134.00
IUUC-Pca-100593	Procavia capensis	25.65	6.00e-11	60.80
IUUC-Ppe-101333	Prunus persica	29.44	6.00e-34	136.00
IUUC-Pva-102283	Pteropus vampyrus	26.18	2.00e-23	102.00
IUUC-Pgr-103383	Puccinia graminis	31.10	1.00e-24	105.00
IUUC-Ptt-103974	Puccinia triticina	33.33	7.00e-23	99.80
IUUC-Pte-104329	Pyrenophora teres	28.20	2.00e-34	138.00
IUUC-Pyt-104424	Pyrenophora triticirepentis	27.95	3.00e-34	138.00
IUUC-Rno-105720	Rattus norvegicus	26.85	7.00e-26	110.00
IUUC-Sha-106891	Sarcophilus harrisii	26.63	5.00e-25	107.00
IUUC-Spo-108060	Schizosaccharomyces pombe	59.42	6.00e-161	558.00
IUUC-Ssl-108481	Sclerotinia sclerotiorum	27.22	2.00e-25	108.00
IUUC-Sit-109862	Setaria italica	31.12	8.00e-37	146.00
IUUC-Sly-111468	Solanum lycopersicum	29.36	5.00e-30	123.00
IUUC-Stu-112346	Solanum tuberosum	30.03	1.00e-26	112.00
IUUC-Sar-113734	Sorex araneus	32.08	6.00e-10	57.40
IUUC-Sbi-114076	Sorghum bicolor	33.05	6.00e-38	149.00
IUUC-Ssc-115561	Sus scrofa	26.85	5.00e-26	110.00
IUUC-Tgu-117011	Taeniopygia guttata	27.17	2.00e-26	112.00
IUUC-Tru-118411	Takifugu rubripes	27.32	6.00e-26	110.00
IUUC-Tsy-119367	Tarsius syrichta	25.57	2.00e-16	79.00
IUUC-Tni-120301	Tetraodon nigroviridis	27.05	2.00e-28	118.00
IUUC-Tca-121265	Theobroma cacao	29.64	2.00e-30	124.00
IUUC-Tre-121997	Trichoderma reesei	26.65	1.00e-30	125.00
IUUC-Tvi-122292	Trichoderma virens	26.41	3.00e-31	128.00
IUUC-Tae-123660	Triticum aestivum	32.68	5.00e-39	153.00
IUUC-Tur-126794	Triticum urartu	32.21	4.00e-30	123.00
IUUC-Tme-127090	Tuber melanosporum	30.45	6.00e-31	126.00
IUUC-Tbe-127646	Tupaia belangeri	26.03	2.00e-19	88.60
IUUC-Ttr-128171	Tursiops truncatus	27.40	8.00e-27	113.00
IUUC-Vda-129871	Verticillium dahliae	28.61	3.00e-30	125.00
IUUC-Vpa-130554	Vicugna pacos	30.57	7.00e-12	63.90
IUUC-Vvi-131698	Vitis vinifera	29.75	4.00e-35	140.00
IUUC-Xtr-131962	Xenopus tropicalis	29.44	6.00e-33	134.00
IUUC-Xma-133803	Xiphophorus maculatus	26.23	1.00e-27	116.00
IUUC-Zma-135693	Zea mays	31.27	5.00e-33	133.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence