iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cme-027344

Ensembl Protein ID

CMC045CT

UniProt Accession

M1VEP4; M1VEP4_CYAM1

Genbank Protein ID

BAM78988.1

Protein Name

60S ribosomal protein L40, ubiquitin fusion protein

Genbank Nucleotide ID

AP006485

Gene Name

CYME_CMC045C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CMC045C	CMC045CT	CMC045CT

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/NEDD8	8.00e-42	139.5	38	113
ULD/UDP/UBQ/UBQ_PIM	6.90e-30	100.9	38	110

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/NEDD8

   S: 1    mlikvktLtgkeieieieesdtierikerveekeGiPPsqqrliyaGkqleddktaadynlekgsvLhLvLaLrGG 76
           m+i+vktLtgk+i++e+e+sdtie++k ++++keGiPP+qqrli+aGkqled++t++dyn++k+s+LhLvL+LrGG
   Q: 38   MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 113
           89*************************************************************************9 PP

ULD/UDP/UBQ/UBQ_PIM

   S: 1    mkltvktlkgkefelevseddtveelKekiakesgvppeqqkLIyaGkiLkDdttLselgikdgsvvhlvvkk 73
           m+++vktl+gk+++lev+++dt+e++K ki+++ g+pp+qq+LI+aGk+L+D +tLs+++i+++s++hlv++ 
   Q: 38   MQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 110
           99********************************************************************986 PP

Organism

Cyanidioschyzon merolae

Protein Sequence
(Fasta)

LLVFRSRRRQ RTDIPQRKRS DRCLDLCFGN TVCSNGTMQI FVKTLTGKTI TLEVEPSDTI 60
ENVKSKIQDK EGIPPDQQRL IFAGKQLEDG RTLSDYNIQK ESTLHLVLRL RGGLIEPSLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCTGGTGT TCCGCTCGCG ACGTCGTCAG CGCACCGACA TTCCACAGCG CAAGCGCTCT 60
GATCGGTGCT TGGATCTCTG TTTCGGTAAC ACGGTGTGTT CGAACGGTAC CATGCAGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0689--Ribosomal protein

Interpro

IPR001975--Ribosomal_L40e
IPR011332--Ribosomal_zn-bd
IPR019956--Ubiquitin
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2

Pfam

PF01020--Ribosomal_L40e
PF00240--ubiquitin

PRINTS

PR00348--UBIQUITIN

SMART

SM01377--Ribosomal_L40e
SM00213--UBQ

Gene Ontology

GO:0005840--C:ribosome
GO:0003735--F:structural constituent of ribosome
GO:0006412--P:translation

KEGG

cme:CYME_CMC045C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001246	Ailuropoda melanoleuca	93.41	1.00e-46	175.00
IUUC-Ath-007098	Arabidopsis thaliana	91.11	8.00e-45	169.00
IUUC-Ago-007932	Ashbya gossypii	92.31	7.00e-46	173.00
IUUC-Acl-008350	Aspergillus clavatus	82.29	8.00e-42	159.00
IUUC-Afl-008554	Aspergillus flavus	90.32	3.00e-46	175.00
IUUC-Afu-008984	Aspergillus fumigatus	89.36	1.00e-45	172.00
IUUC-Ang-009609	Aspergillus niger	91.21	2.00e-45	171.00
IUUC-Aor-009991	Aspergillus oryzae	88.04	5.00e-44	167.00
IUUC-Ate-010252	Aspergillus terreus	90.91	2.00e-43	167.00
IUUC-Bgr-012115	Blumeria graminis	92.05	2.00e-43	165.00
IUUC-Bta-013360	Bos taurus	93.41	1.00e-46	175.00
IUUC-Bci-013851	Botrytis cinerea	92.31	1.00e-45	172.00
IUUC-Bdi-014499	Brachypodium distachyon	92.22	2.00e-45	171.00
IUUC-Bol-015961	Brassica oleracea	92.22	2.00e-45	171.00
IUUC-Cel-018677	Caenorhabditis elegans	92.31	8.00e-46	172.00
IUUC-Cja-019572	Callithrix jacchus	93.41	1.00e-46	175.00
IUUC-Cfa-020339	Canis familiaris	93.41	1.00e-46	175.00
IUUC-Cpo-021534	Cavia porcellus	93.41	1.00e-46	175.00
IUUC-Cre-022567	Chlamydomonas reinhardtii	93.33	8.00e-46	172.00
IUUC-Csa-023398	Chlorocebus sabaeus	93.41	1.00e-46	175.00
IUUC-Cin-025266	Ciona intestinalis	90.11	2.00e-44	168.00
IUUC-Csv-026105	Ciona savignyi	90.11	9.00e-45	169.00
IUUC-Cgl-026502	Colletotrichum gloeosporioides	92.05	6.00e-43	166.00
IUUC-Cne-026913	Cryptococcus neoformans	93.41	3.00e-46	174.00
IUUC-Dre-028761	Danio rerio	93.41	1.00e-46	175.00
IUUC-Dno-028899	Dasypus novemcinctus	93.41	8.00e-47	176.00
IUUC-Dme-031588	Drosophila melanogaster	93.41	2.00e-46	175.00
IUUC-Ete-033120	Echinops telfairi	93.41	1.00e-46	175.00
IUUC-Eca-033787	Equus caballus	93.41	1.00e-46	175.00
IUUC-Fca-035725	Felis catus	93.41	1.00e-46	175.00
IUUC-Fox-037870	Fusarium oxysporum	92.31	1.00e-45	172.00
IUUC-Fso-038461	Fusarium solani	96.20	1.00e-40	154.00
IUUC-Gmo-039163	Gadus morhua	91.40	8.00e-47	176.00
IUUC-Ggr-040034	Gaeumannomyces graminis	90.32	1.00e-45	172.00
IUUC-Gga-040909	Gallus gallus	91.21	6.00e-46	173.00
IUUC-Gac-041640	Gasterosteus aculeatus	91.40	8.00e-47	176.00
IUUC-Gma-043464	Glycine max	92.22	8.00e-46	172.00
IUUC-Ggo-045411	Gorilla gorilla	93.41	1.00e-46	175.00
IUUC-Hvu-047579	Hordeum vulgare	71.13	1.00e-33	132.00
IUUC-Itr-048586	Ictidomys tridecemlineatus	90.43	8.00e-47	177.00
IUUC-Kpa-049279	Komagataella pastoris	92.31	1.00e-45	172.00
IUUC-Lch-049971	Latimeria chalumnae	84.16	9.00e-47	177.00
IUUC-Lpe-051472	Leersia perrieri	82.29	8.00e-33	132.00
IUUC-Loc-052117	Lepisosteus oculatus	93.41	2.00e-46	176.00
IUUC-Lma-053049	Leptosphaeria maculans	93.41	4.00e-46	174.00
IUUC-Laf-054284	Loxodonta africana	90.43	7.00e-47	177.00
IUUC-Mcc-055710	Macaca mulatta	90.43	6.00e-47	177.00
IUUC-Meu-056411	Macropus eugenii	93.41	1.00e-46	175.00
IUUC-Mor-057008	Magnaporthe oryzae	92.31	1.00e-45	172.00
IUUC-Mpo-057360	Magnaporthe poae	92.31	1.00e-45	172.00
IUUC-Mtr-058218	Medicago truncatula	92.22	2.00e-45	172.00
IUUC-Mla-059080	Melampsora laricipopulina	90.00	2.00e-43	164.00
IUUC-Mmr-061259	Microcebus murinus	84.04	8.00e-41	157.00
IUUC-Mdo-062752	Monodelphis domestica	93.41	1.00e-46	175.00
IUUC-Mmu-063548	Mus musculus	90.43	6.00e-47	177.00
IUUC-Mac-065626	Musa acuminata	92.22	2.00e-45	171.00
IUUC-Mpu-066513	Mustela putorius furo	93.41	1.00e-46	175.00
IUUC-Mlu-068010	Myotis lucifugus	91.21	2.00e-45	171.00
IUUC-Nfi-068358	Neosartorya fischeri	88.04	3.00e-44	167.00
IUUC-Ncr-068799	Neurospora crassa	91.21	5.00e-45	170.00
IUUC-Opr-070655	Ochotona princeps	93.41	1.00e-46	175.00
IUUC-Ont-072180	Oreochromis niloticus	91.40	1.00e-46	175.00
IUUC-Oan-073196	Ornithorhynchus anatinus	93.41	1.00e-46	175.00
IUUC-Oba-075092	Oryza barthii	92.22	2.00e-45	171.00
IUUC-Obr-076156	Oryza brachyantha	92.22	3.00e-45	171.00
IUUC-Ogl-077471	Oryza glaberrima	92.22	2.00e-45	171.00
IUUC-Ogu-078259	Oryza glumaepatula	92.22	2.00e-45	171.00
IUUC-Oin-079901	Oryza indica	92.22	2.00e-45	171.00
IUUC-Ome-081343	Oryza meridionalis	92.22	2.00e-45	171.00
IUUC-Oni-082301	Oryza nivara	80.61	7.00e-33	130.00
IUUC-Opu-083839	Oryza punctata	64.95	2.00e-18	85.10
IUUC-Oru-085252	Oryza rufipogon	92.22	2.00e-45	171.00
IUUC-Osa-086118	Oryza sativa	84.95	3.00e-35	139.00
IUUC-Ola-086333	Oryzias latipes	92.31	9.00e-46	172.00
IUUC-Olu-087819	Ostreococcus lucimarinus	82.22	8.00e-41	156.00
IUUC-Oga-088027	Otolemur garnettii	93.41	1.00e-46	175.00
IUUC-Oar-090419	Ovis aries	93.41	1.00e-46	175.00
IUUC-Ptr-091593	Pan troglodytes	93.41	1.00e-46	175.00
IUUC-Pan-091806	Papio anubis	92.22	2.00e-45	171.00
IUUC-Psi-093654	Pelodiscus sinensis	93.41	1.00e-46	175.00
IUUC-Pma-094556	Petromyzon marinus	96.20	3.00e-40	157.00
IUUC-Ppa-095174	Physcomitrella patens	92.22	2.00e-45	171.00
IUUC-Pfo-096492	Poecilia formosa	93.41	1.00e-46	175.00
IUUC-Pab-098004	Pongo abelii	93.41	1.00e-46	175.00
IUUC-Pop-098929	Populus trichocarpa	92.22	2.00e-45	171.00
IUUC-Ppe-101497	Prunus persica	92.22	2.00e-45	171.00
IUUC-Pva-102945	Pteropus vampyrus	93.41	1.00e-46	175.00
IUUC-Pgr-103268	Puccinia graminis	92.31	2.00e-45	172.00
IUUC-Ptt-103804	Puccinia triticina	79.13	3.00e-46	174.00
IUUC-Pte-104101	Pyrenophora teres	89.47	4.00e-46	174.00
IUUC-Pyt-104639	Pyrenophora triticirepentis	92.31	2.00e-45	171.00
IUUC-Rno-105290	Rattus norvegicus	93.41	1.00e-46	175.00
IUUC-Sce-106249	Saccharomyces cerevisiae	93.41	4.00e-46	174.00
IUUC-Sha-106570	Sarcophilus harrisii	93.41	1.00e-46	175.00
IUUC-Sja-107834	Schizosaccharomyces japonicus	93.41	4.00e-46	174.00
IUUC-Spo-108045	Schizosaccharomyces pombe	93.41	4.00e-46	174.00
IUUC-Ssl-108670	Sclerotinia sclerotiorum	91.21	2.00e-45	171.00
IUUC-Sit-110085	Setaria italica	91.30	5.00e-46	174.00
IUUC-Sly-111884	Solanum lycopersicum	92.22	2.00e-45	171.00
IUUC-Stu-112385	Solanum tuberosum	92.22	3.00e-45	171.00
IUUC-Sar-112942	Sorex araneus	93.41	1.00e-46	175.00
IUUC-Sbi-114790	Sorghum bicolor	92.22	2.00e-45	172.00
IUUC-Sre-114908	Sporisorium reilianum	91.21	5.00e-45	170.00
IUUC-Ssc-116417	Sus scrofa	93.41	1.00e-46	175.00
IUUC-Tru-117557	Takifugu rubripes	93.41	1.00e-46	175.00
IUUC-Tni-119715	Tetraodon nigroviridis	93.41	1.00e-46	175.00
IUUC-Tca-121404	Theobroma cacao	92.22	2.00e-45	172.00
IUUC-Tre-122012	Trichoderma reesei	94.94	1.00e-39	154.00
IUUC-Tvi-122611	Trichoderma virens	91.21	5.00e-45	170.00
IUUC-Tae-125522	Triticum aestivum	92.22	3.00e-45	171.00
IUUC-Tur-126527	Triticum urartu	92.22	2.00e-45	171.00
IUUC-Tme-127138	Tuber melanosporum	93.18	1.00e-44	169.00
IUUC-Ttr-128939	Tursiops truncatus	93.41	1.00e-46	175.00
IUUC-Uma-129619	Ustilago maydis	91.21	5.00e-45	170.00
IUUC-Vda-129775	Verticillium dahliae	92.13	2.00e-44	168.00
IUUC-Vvi-131414	Vitis vinifera	92.22	2.00e-45	171.00
IUUC-Xtr-131921	Xenopus tropicalis	93.41	1.00e-46	175.00
IUUC-Xma-134071	Xiphophorus maculatus	93.41	1.00e-46	175.00
IUUC-Yli-134671	Yarrowia lipolytica	93.41	4.00e-46	174.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence