iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121326

Ensembl Protein ID

EOY14655

UniProt Accession

A0A061FBH8; A0A061FBH8_THECC

Genbank Protein ID

EOY14655.1

Protein Name

IBR domain-containing protein, putative

Genbank Nucleotide ID

CM001886

Gene Name

TCM_033966

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_033966	EOY14655	EOY14655

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RBR	1.10e-42	146.8	126	314

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RBR

   S: 1    CkvCllelsveeltvlleCehtfCkeClkqylelkikegqv.teiscpaaecpekleeseikellveeelykryekllleevveadaalk 89
           C++C+ ++s + +  ++ C h +C +C+++y++++i +g     ++cp+++c + + e+ i    ++ee +k+y+ + + +++e ++ +k
   Q: 126  CRICFESYSRDGIK-STVCGHPYCSDCWSSYIKTAIADGPGsLLLKCPEPSCRAAVGEDMIGV-FASEEEKKKYSGYFVMSYIEDSKMIK 213
           *****999997766.789*********************9846789***************99.7999********************** PP
   S: 90   wcpapdCslvvllekeaeklevecekcgkefCveCkeewHeglsCkelkeklakteeekeeaeskelleanskkCpkCkvyieknegCnh 179
           wcp p+C+ ++ ++  ++++ v+c +c++ fC++C+ee+H++++C++++++ +k++   +eae+ +++ a +k+CpkC+ +iekn gC h
   Q: 214  WCPGPGCENAINFDAGSTNFDVSC-ACSHLFCWNCSEEAHRPVDCETVRKWIMKNS---SEAENVNYILAFTKPCPKCRRPIEKNMGCSH 299
           ****************9*******.9*****************************9...99***************************** PP
   S: 180  mtC.akCkaefCwlC 193
           m+C a C ++fCwlC
   Q: 300  MSCmAPCYYQFCWLC 314
           ***999********* PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSGSEDDNNL GNDDGDYYFC NAEDTEDDDE GIALQEDETD NLPRSHQNYT VLKEADIRHR 60
MEDSIGEVSG VLSISKVEAS ILLLHYNWSV GKVHDSWFTD EGEARKKAGL VVKPLIELPD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAATCCAAT CGCCAAGGTA TGATCTTATC AAATCCAAAT GAACCATTGA ATCTCAGCAG 60
CCTCCACGTG GGCATGATTA ACTGTTTTTA TTGGTGGGTG CACTGAGCAT GTGTATGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR018957--Znf_C3HC4_RING-type
IPR001876--Znf_RanBP2
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01358--ZF_RANBP2_1
PS50199--ZF_RANBP2_2
PS50089--ZF_RING_2

Pfam

PF01485--IBR
PF00097--zf-C3HC4
PF00641--zf-RanBP

SMART

SM00647--IBR
SM00547--ZnF_RBZ

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001557	Ailuropoda melanoleuca	28.91	6.00e-54	204.00
IUUC-Apl-003878	Anas platyrhynchos	29.24	4.00e-53	201.00
IUUC-Aca-004865	Anolis carolinensis	28.74	5.00e-52	197.00
IUUC-Bta-012901	Bos taurus	28.91	3.00e-54	205.00
IUUC-Cja-019728	Callithrix jacchus	28.67	4.00e-53	201.00
IUUC-Cfa-020953	Canis familiaris	28.91	6.00e-54	204.00
IUUC-Cpo-021445	Cavia porcellus	29.15	5.00e-54	204.00
IUUC-Csa-023769	Chlorocebus sabaeus	29.15	3.00e-54	205.00
IUUC-Dre-028490	Danio rerio	30.87	3.00e-54	205.00
IUUC-Dno-029942	Dasypus novemcinctus	28.91	6.00e-54	204.00
IUUC-Dme-031853	Drosophila melanogaster	28.75	1.00e-51	196.00
IUUC-Ete-032355	Echinops telfairi	27.96	3.00e-48	185.00
IUUC-Eca-033440	Equus caballus	28.91	6.00e-54	204.00
IUUC-Fca-036308	Felis catus	28.34	8.00e-48	184.00
IUUC-Fal-036974	Ficedula albicollis	29.24	4.00e-53	201.00
IUUC-Gmo-038642	Gadus morhua	31.44	5.00e-50	191.00
IUUC-Gga-041019	Gallus gallus	29.24	4.00e-53	201.00
IUUC-Gac-042014	Gasterosteus aculeatus	29.58	5.00e-55	207.00
IUUC-Ggo-045329	Gorilla gorilla	28.91	4.00e-54	204.00
IUUC-Hsa-046712	Homo sapiens	28.91	4.00e-54	204.00
IUUC-Itr-048370	Ictidomys tridecemlineatus	30.57	2.00e-53	202.00
IUUC-Lch-049584	Latimeria chalumnae	29.90	2.00e-54	205.00
IUUC-Laf-054567	Loxodonta africana	28.89	4.00e-51	194.00
IUUC-Mcc-054919	Macaca mulatta	29.15	3.00e-54	205.00
IUUC-Meu-056332	Macropus eugenii	28.99	1.00e-50	192.00
IUUC-Mga-060132	Meleagris gallopavo	29.27	5.00e-53	201.00
IUUC-Mdo-062186	Monodelphis domestica	30.08	4.00e-52	197.00
IUUC-Mmu-064271	Mus musculus	29.38	1.00e-54	206.00
IUUC-Mpu-066827	Mustela putorius furo	30.00	4.00e-52	197.00
IUUC-Mlu-067528	Myotis lucifugus	28.67	5.00e-50	191.00
IUUC-Nle-068995	Nomascus leucogenys	28.91	4.00e-54	204.00
IUUC-Opr-070518	Ochotona princeps	29.17	5.00e-51	194.00
IUUC-Ont-071650	Oreochromis niloticus	28.97	3.00e-53	201.00
IUUC-Oan-073676	Ornithorhynchus anatinus	31.41	3.00e-48	185.00
IUUC-Ocu-073761	Oryctolagus cuniculus	28.91	7.00e-54	204.00
IUUC-Ola-087204	Oryzias latipes	30.21	5.00e-54	204.00
IUUC-Oga-088098	Otolemur garnettii	29.15	1.00e-54	206.00
IUUC-Oar-089205	Ovis aries	28.91	3.00e-54	205.00
IUUC-Ptr-091514	Pan troglodytes	28.91	4.00e-54	204.00
IUUC-Pfo-097256	Poecilia formosa	30.52	2.00e-53	202.00
IUUC-Pca-100700	Procavia capensis	27.52	4.00e-44	171.00
IUUC-Pva-103105	Pteropus vampyrus	28.80	1.00e-52	200.00
IUUC-Rno-105289	Rattus norvegicus	28.67	1.00e-53	202.00
IUUC-Sha-107417	Sarcophilus harrisii	29.47	2.00e-49	189.00
IUUC-Sar-113042	Sorex araneus	28.91	4.00e-54	204.00
IUUC-Ssc-115362	Sus scrofa	29.15	9.00e-55	207.00
IUUC-Tgu-117469	Taeniopygia guttata	29.24	6.00e-53	201.00
IUUC-Tru-117976	Takifugu rubripes	29.07	3.00e-54	205.00
IUUC-Tni-119831	Tetraodon nigroviridis	29.30	2.00e-53	202.00
IUUC-Ttr-128315	Tursiops truncatus	28.91	1.00e-53	203.00
IUUC-Xtr-132945	Xenopus tropicalis	29.31	2.00e-55	209.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence