iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117523

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01004587

Gene Name

SEH1L

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000009525.1	ENSTGUT00000009929.1	ENSTGUP00000009823.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.40e-23	80.0	11	41

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDl 30
           H d +++++f  ++++++++s D ++kvWD 
   Q: 11   HRDLIHDVSFdfHGRRMATCSSDQSVKVWDK 41
           99********976599**************6 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MFVARSIAAD HRDLIHDVSF DFHGRRMATC SSDQSVKVWD KSENGDWHCT ASWKTHSGSV 60
WRVTWAHPEF GQVLASCSFD RTAAVWEEIV GESNDKLRGQ SHWVKRTTLV DSRTSVTDVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCGTGG CGCGCAGCAT CGCCGCGGAT CACCGCGACC TCATCCACGA TGTGTCCTTC 60
GACTTCCACG GGCGCCGCAT GGCCACCTGC TCCAGCGACC AGAGCGTCAA GGTGAGCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0061700--C:GATOR2 complex
GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring
GO:0051315--P:attachment of mitotic spindle microtubules to kinetochore
GO:0034629--P:cellular protein complex localization
GO:0034198--P:cellular response to amino acid starvation
GO:0002534--P:cytokine production involved in inflammatory response
GO:0050830--P:defense response to Gram-positive bacterium
GO:0006999--P:nuclear pore organization
GO:1904263--P:positive regulation of TORC1 signaling

KEGG

tgu:101233238

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001926	Ailuropoda melanoleuca	93.50	0.00e+00	693.00
IUUC-Apl-003654	Anas platyrhynchos	98.95	0.00e+00	760.00
IUUC-Aca-004378	Anolis carolinensis	92.28	5.00e-173	599.00
IUUC-Ago-007816	Ashbya gossypii	34.62	1.00e-50	192.00
IUUC-Ame-011945	Astyanax mexicanus	84.55	5.00e-171	592.00
IUUC-Bta-013306	Bos taurus	93.56	0.00e+00	629.00
IUUC-Cel-018235	Caenorhabditis elegans	43.27	2.00e-76	278.00
IUUC-Cja-018849	Callithrix jacchus	92.14	0.00e+00	726.00
IUUC-Cfa-020841	Canis familiaris	95.18	9.00e-175	608.00
IUUC-Cpo-021379	Cavia porcellus	92.72	1.00e-179	621.00
IUUC-Csa-023900	Chlorocebus sabaeus	92.87	0.00e+00	730.00
IUUC-Cho-024660	Choloepus hoffmanni	91.34	0.00e+00	645.00
IUUC-Cin-025471	Ciona intestinalis	57.10	4.00e-104	370.00
IUUC-Csv-026242	Ciona savignyi	58.96	3.00e-87	313.00
IUUC-Dre-028068	Danio rerio	87.27	3.00e-178	616.00
IUUC-Dno-029981	Dasypus novemcinctus	85.35	0.00e+00	669.00
IUUC-Dme-031763	Drosophila melanogaster	56.62	2.00e-110	391.00
IUUC-Ete-032243	Echinops telfairi	59.72	4.00e-110	390.00
IUUC-Eca-033425	Equus caballus	93.12	8.00e-159	552.00
IUUC-Eeu-035119	Erinaceus europaeus	76.59	4.00e-140	490.00
IUUC-Fca-036520	Felis catus	92.79	0.00e+00	712.00
IUUC-Fal-037234	Ficedula albicollis	99.38	0.00e+00	642.00
IUUC-Gmo-039013	Gadus morhua	85.47	8.00e-175	605.00
IUUC-Gga-041059	Gallus gallus	99.52	0.00e+00	838.00
IUUC-Gac-041337	Gasterosteus aculeatus	84.64	3.00e-170	590.00
IUUC-Ggo-044944	Gorilla gorilla	93.11	0.00e+00	771.00
IUUC-Hsa-046038	Homo sapiens	92.64	0.00e+00	768.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	94.38	1.00e-160	558.00
IUUC-Kpa-049201	Komagataella pastoris	36.25	1.00e-50	192.00
IUUC-Lch-050466	Latimeria chalumnae	81.62	0.00e+00	744.00
IUUC-Loc-052773	Lepisosteus oculatus	75.89	1.00e-169	588.00
IUUC-Laf-053409	Loxodonta africana	94.40	0.00e+00	632.00
IUUC-Meu-055958	Macropus eugenii	72.56	1.00e-153	535.00
IUUC-Mga-059348	Meleagris gallopavo	99.37	0.00e+00	628.00
IUUC-Mmr-060977	Microcebus murinus	96.30	3.00e-133	466.00
IUUC-Mdo-061806	Monodelphis domestica	96.37	0.00e+00	681.00
IUUC-Mmu-064328	Mus musculus	93.28	0.00e+00	659.00
IUUC-Mpu-066873	Mustela putorius furo	92.29	0.00e+00	669.00
IUUC-Mlu-067563	Myotis lucifugus	87.11	1.00e-176	611.00
IUUC-Nle-068977	Nomascus leucogenys	94.56	4.00e-179	619.00
IUUC-Opr-070773	Ochotona princeps	62.76	3.00e-109	387.00
IUUC-Ont-072644	Oreochromis niloticus	84.28	8.00e-176	608.00
IUUC-Oan-073098	Ornithorhynchus anatinus	94.41	2.00e-164	571.00
IUUC-Ocu-073911	Oryctolagus cuniculus	91.23	0.00e+00	748.00
IUUC-Ola-087096	Oryzias latipes	82.40	0.00e+00	627.00
IUUC-Oga-088798	Otolemur garnettii	93.84	0.00e+00	667.00
IUUC-Oar-090298	Ovis aries	92.55	5.00e-162	566.00
IUUC-Ptr-091074	Pan troglodytes	94.96	0.00e+00	674.00
IUUC-Pan-092013	Papio anubis	95.67	6.00e-139	485.00
IUUC-Psi-093508	Pelodiscus sinensis	96.25	3.00e-178	617.00
IUUC-Pma-094288	Petromyzon marinus	83.81	3.00e-103	366.00
IUUC-Ppa-095228	Physcomitrella patens	32.75	2.00e-37	149.00
IUUC-Pfo-096384	Poecilia formosa	83.20	2.00e-173	600.00
IUUC-Pab-098629	Pongo abelii	94.68	0.00e+00	674.00
IUUC-Pca-100322	Procavia capensis	68.73	8.00e-130	456.00
IUUC-Pva-102861	Pteropus vampyrus	92.04	0.00e+00	689.00
IUUC-Rno-104895	Rattus norvegicus	89.73	2.00e-179	624.00
IUUC-Sce-106420	Saccharomyces cerevisiae	35.04	1.00e-54	206.00
IUUC-Sha-106829	Sarcophilus harrisii	90.56	0.00e+00	630.00
IUUC-Sja-107923	Schizosaccharomyces japonicus	39.71	9.00e-66	243.00
IUUC-Spo-108184	Schizosaccharomyces pombe	38.62	7.00e-66	243.00
IUUC-Smo-109282	Selaginella moellendorffii	34.08	1.00e-37	149.00
IUUC-Sar-113279	Sorex araneus	91.85	3.00e-180	623.00
IUUC-Ssc-115589	Sus scrofa	92.21	2.00e-168	584.00
IUUC-Tru-117985	Takifugu rubripes	81.49	4.00e-154	539.00
IUUC-Tsy-118913	Tarsius syrichta	91.03	0.00e+00	642.00
IUUC-Tni-120670	Tetraodon nigroviridis	85.83	4.00e-175	606.00
IUUC-Tme-126885	Tuber melanosporum	36.87	4.00e-56	211.00
IUUC-Tbe-127344	Tupaia belangeri	76.01	1.00e-158	552.00
IUUC-Ttr-128347	Tursiops truncatus	92.10	2.00e-178	617.00
IUUC-Vpa-130656	Vicugna pacos	87.67	2.00e-171	594.00
IUUC-Xtr-132736	Xenopus tropicalis	92.70	0.00e+00	659.00
IUUC-Xma-133678	Xiphophorus maculatus	84.92	2.00e-173	601.00
IUUC-Yli-134659	Yarrowia lipolytica	41.12	3.00e-63	234.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence