iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075255

Ensembl Protein ID

OBART11G21870.1

UniProt Accession

A0A0D3HPM7; A0A0D3HPM7_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART11G21870	OBART11G21870.1	OBART11G21870.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-33	112.9	199	233
UBD/Beta-Prp	1.80e-46	159.7	21	278

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtl.lvsGsdDgtikvWDlrtg 33
           gH+++v +++  +d++ +++Gs D t+++WD+ t 
   Q: 199  GHASWVLSIDVsPDGMaVATGSSDRTVRLWDINTR 233
           8***********99553899***********8765 PP

UBD/Beta-Prp

   S: 54   evtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqclee...........tlsg 135
           +v ++  +p g + + +s D  ++v+d+++g+ v tl++  ++v+ ++f+p+g    ++G+    +++wd+e+ + + +            ++g
   Q: 21   GVVSLAAHPAGALAAAVSLDSYVRVFDVDSGSSVATLEAPPSEVWGIQFHPKGsALAAAGGGSGSVKLWDTEKWKPITSlavprpegarpDKTG 114
           5889999********************************************9967778899****************99**********98999 PP
   S: 136  hdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngke.lvsgsldgtvklwdlqtgecvrtlnghtdnvksv 228
             ++v +v+++pdg+ll+ Gs D+t+ ++d  ++k l++l+g h+ +v+s+ f++  ++ l ++s+d  + ++d ++++ + ++ gh ++v+s+
   Q: 115  SGKFVLSVAWSPDGKLLACGSMDGTIAVYDAVRMKFLHHLEG-HHMPVRSMVFSPVDPHvLFTASDDCHIHIYDAKEKSLIGAMSGHASWVLSI 207
           *****************************************9.************9866156999***************************** PP
   S: 229  rfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvav.....lsfgdnvlvlgsedskvniwkl 294
           ++sp++  +++gssD+++r+Wd+ ++  ++t+++hn++v++va+      ++    l+++s+d+++ ++++
   Q: 208  DVSPDGMAVATGSSDRTVRLWDINTRASVQTMSNHNDQVWAVAFrppggTGVRAGRLASVSDDKSITLYDY 278
           ********************************************7776666668888************98 PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MKLAGLKSVD GAHEESIYAL GVVSLAAHPA GALAAAVSLD SYVRVFDVDS GSSVATLEAP 60
PSEVWGIQFH PKGSALAAAG GGSGSVKLWD TEKWKPITSL AVPRPEGARP DKTGSGKFVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGCTCG CGGGGCTCAA GTCGGTGGAC GGGGCACACG AGGAGTCCAT CTACGCGCTC 60
GGGGTGGTGT CGCTCGCCGC CCACCCCGCG GGCGCCCTCG CCGCCGCCGT CTCCCTCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016593--C:Cdc73/Paf1 complex
GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0010452--P:histone H3-K36 methylation
GO:0051568--P:histone H3-K4 methylation
GO:0009910--P:negative regulation of flower development
GO:0016441--P:posttranscriptional gene silencing

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000774	Aegilops tauschii	69.65	1.00e-121	428.00
IUUC-Aml-002245	Ailuropoda melanoleuca	40.00	1.00e-41	162.00
IUUC-Atr-003142	Amborella trichopoda	68.69	9.00e-81	291.00
IUUC-Apl-003179	Anas platyrhynchos	40.38	1.00e-44	172.00
IUUC-Aca-004880	Anolis carolinensis	40.77	3.00e-49	187.00
IUUC-Aly-005956	Arabidopsis lyrata	61.99	2.00e-104	371.00
IUUC-Ath-007230	Arabidopsis thaliana	62.31	3.00e-102	363.00
IUUC-Acl-008297	Aspergillus clavatus	32.14	1.00e-16	80.10
IUUC-Ame-011511	Astyanax mexicanus	40.84	3.00e-44	171.00
IUUC-Bgr-012189	Blumeria graminis	30.25	2.00e-17	82.00
IUUC-Bta-012936	Bos taurus	40.00	7.00e-42	163.00
IUUC-Bdi-015020	Brachypodium distachyon	80.43	3.00e-128	450.00
IUUC-Bol-016345	Brassica oleracea	62.62	3.00e-105	374.00
IUUC-Bra-017323	Brassica rapa	62.62	2.00e-105	374.00
IUUC-Cja-019961	Callithrix jacchus	40.00	6.00e-42	163.00
IUUC-Cfa-020862	Canis familiaris	40.38	4.00e-42	164.00
IUUC-Cpo-021356	Cavia porcellus	40.00	5.00e-42	164.00
IUUC-Cre-022602	Chlamydomonas reinhardtii	43.46	1.00e-39	156.00
IUUC-Csa-024067	Chlorocebus sabaeus	40.00	1.00e-41	162.00
IUUC-Cho-024421	Choloepus hoffmanni	37.65	6.00e-21	93.20
IUUC-Cin-025261	Ciona intestinalis	38.31	1.00e-45	176.00
IUUC-Cne-026846	Cryptococcus neoformans	37.93	3.00e-23	102.00
IUUC-Dre-027706	Danio rerio	30.77	4.00e-22	97.80
IUUC-Dno-029084	Dasypus novemcinctus	40.08	2.00e-40	159.00
IUUC-Dor-030353	Dipodomys ordii	35.09	3.00e-31	128.00
IUUC-Dme-031836	Drosophila melanogaster	38.26	5.00e-44	171.00
IUUC-Ete-032261	Echinops telfairi	39.23	2.00e-41	161.00
IUUC-Eca-034231	Equus caballus	37.31	1.00e-33	136.00
IUUC-Eeu-034828	Erinaceus europaeus	39.62	1.00e-39	155.00
IUUC-Fca-036569	Felis catus	40.00	9.00e-42	163.00
IUUC-Fal-037469	Ficedula albicollis	40.77	2.00e-44	171.00
IUUC-Fox-038047	Fusarium oxysporum	27.80	3.00e-18	84.70
IUUC-Gmo-039579	Gadus morhua	41.92	6.00e-46	177.00
IUUC-Gga-040808	Gallus gallus	40.00	1.00e-43	169.00
IUUC-Gac-042100	Gasterosteus aculeatus	41.54	2.00e-45	174.00
IUUC-Gma-044408	Glycine max	64.17	4.00e-105	373.00
IUUC-Ggo-045227	Gorilla gorilla	40.00	6.00e-42	163.00
IUUC-Hsa-045839	Homo sapiens	40.00	6.00e-42	163.00
IUUC-Hvu-047591	Hordeum vulgare	77.33	4.00e-125	440.00
IUUC-Itr-048741	Ictidomys tridecemlineatus	40.00	8.00e-42	163.00
IUUC-Lch-049549	Latimeria chalumnae	36.92	1.00e-38	152.00
IUUC-Lpe-050746	Leersia perrieri	84.57	4.00e-133	466.00
IUUC-Loc-052540	Lepisosteus oculatus	40.38	1.00e-40	159.00
IUUC-Laf-053907	Loxodonta africana	40.00	8.00e-42	163.00
IUUC-Mcc-055828	Macaca mulatta	37.14	2.00e-38	152.00
IUUC-Meu-056075	Macropus eugenii	40.77	8.00e-45	172.00
IUUC-Mor-056971	Magnaporthe oryzae	34.73	4.00e-19	88.20
IUUC-Mtr-057728	Medicago truncatula	61.99	4.00e-98	350.00
IUUC-Mga-059872	Meleagris gallopavo	40.00	6.00e-44	170.00
IUUC-Mmr-060985	Microcebus murinus	40.00	1.00e-41	162.00
IUUC-Mdo-062758	Monodelphis domestica	41.15	4.00e-44	171.00
IUUC-Mmu-063580	Mus musculus	39.62	2.00e-41	161.00
IUUC-Mac-064880	Musa acuminata	67.60	8.00e-112	395.00
IUUC-Mpu-066577	Mustela putorius furo	40.00	1.00e-41	162.00
IUUC-Nle-069573	Nomascus leucogenys	40.00	6.00e-42	163.00
IUUC-Opr-070216	Ochotona princeps	40.38	7.00e-42	163.00
IUUC-Ont-071981	Oreochromis niloticus	40.38	2.00e-44	171.00
IUUC-Oan-073223	Ornithorhynchus anatinus	42.05	5.00e-35	140.00
IUUC-Ocu-074199	Oryctolagus cuniculus	36.44	5.00e-32	130.00
IUUC-Obr-076168	Oryza brachyantha	97.94	1.00e-111	394.00
IUUC-Ogl-077777	Oryza glaberrima	86.07	4.00e-134	469.00
IUUC-Ogu-078780	Oryza glumaepatula	86.07	4.00e-134	469.00
IUUC-Oin-079228	Oryza indica	85.76	3.00e-138	483.00
IUUC-Olo-080617	Oryza longistaminata	100.00	2.00e-82	296.00
IUUC-Ome-081421	Oryza meridionalis	85.14	4.00e-137	479.00
IUUC-Oni-082997	Oryza nivara	85.76	3.00e-138	483.00
IUUC-Opu-083931	Oryza punctata	85.71	2.00e-138	484.00
IUUC-Oru-084645	Oryza rufipogon	86.07	4.00e-134	469.00
IUUC-Osa-085842	Oryza sativa	85.76	3.00e-138	483.00
IUUC-Ola-086696	Oryzias latipes	40.00	2.00e-41	162.00
IUUC-Olu-087643	Ostreococcus lucimarinus	46.67	1.00e-48	185.00
IUUC-Oga-088272	Otolemur garnettii	40.00	6.00e-42	163.00
IUUC-Oar-089416	Ovis aries	40.00	7.00e-42	163.00
IUUC-Ptr-090944	Pan troglodytes	40.00	6.00e-42	163.00
IUUC-Pan-091861	Papio anubis	40.00	6.00e-42	163.00
IUUC-Psi-093750	Pelodiscus sinensis	40.00	2.00e-43	168.00
IUUC-Pma-094608	Petromyzon marinus	39.62	8.00e-38	149.00
IUUC-Ppa-095737	Physcomitrella patens	64.66	3.00e-88	317.00
IUUC-Pfo-096479	Poecilia formosa	41.15	3.00e-44	171.00
IUUC-Pab-098179	Pongo abelii	40.00	6.00e-42	163.00
IUUC-Pop-099532	Populus trichocarpa	62.12	4.00e-91	327.00
IUUC-Pca-100664	Procavia capensis	32.89	1.00e-21	95.90
IUUC-Ppe-102056	Prunus persica	61.99	6.00e-100	356.00
IUUC-Pva-102859	Pteropus vampyrus	39.62	9.00e-41	159.00
IUUC-Rno-105826	Rattus norvegicus	39.62	3.00e-41	161.00
IUUC-Sha-106660	Sarcophilus harrisii	40.77	1.00e-43	169.00
IUUC-Sja-107800	Schizosaccharomyces japonicus	34.29	4.00e-20	91.30
IUUC-Spo-108244	Schizosaccharomyces pombe	32.14	1.00e-19	89.70
IUUC-Smo-109382	Selaginella moellendorffii	61.69	2.00e-80	291.00
IUUC-Sit-110048	Setaria italica	81.37	6.00e-120	422.00
IUUC-Sly-111249	Solanum lycopersicum	62.22	7.00e-90	323.00
IUUC-Stu-112659	Solanum tuberosum	63.33	1.00e-89	322.00
IUUC-Sar-113743	Sorex araneus	41.18	1.00e-25	109.00
IUUC-Sbi-114309	Sorghum bicolor	79.81	2.00e-118	417.00
IUUC-Ssc-115560	Sus scrofa	40.43	5.00e-39	154.00
IUUC-Tgu-117300	Taeniopygia guttata	40.38	6.00e-44	170.00
IUUC-Tru-117933	Takifugu rubripes	40.38	8.00e-45	173.00
IUUC-Tsy-119574	Tarsius syrichta	31.92	7.00e-24	103.00
IUUC-Tni-120191	Tetraodon nigroviridis	39.17	3.00e-40	157.00
IUUC-Tca-120983	Theobroma cacao	62.11	3.00e-94	337.00
IUUC-Tae-123999	Triticum aestivum	78.57	5.00e-124	436.00
IUUC-Tur-126711	Triticum urartu	77.71	4.00e-121	426.00
IUUC-Tbe-127802	Tupaia belangeri	40.00	9.00e-42	163.00
IUUC-Ttr-128861	Tursiops truncatus	43.41	1.00e-17	82.80
IUUC-Vda-129720	Verticillium dahliae	29.32	2.00e-15	76.30
IUUC-Vpa-130618	Vicugna pacos	41.03	3.00e-34	137.00
IUUC-Vvi-130981	Vitis vinifera	65.42	1.00e-97	348.00
IUUC-Xtr-132460	Xenopus tropicalis	40.00	7.00e-41	160.00
IUUC-Xma-134154	Xiphophorus maculatus	41.15	2.00e-44	171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence