iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026481

Ensembl Protein ID

ELA34605

UniProt Accession

L2G888; L2G888_COLGN

Genbank Protein ID

ELA34605.1

Protein Name

U3 small nucleolar rna-associated protein

Genbank Nucleotide ID

KB020606

Gene Name

CGGC5_5585

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_5585	ELA34605	ELA34605

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-40	135.4	196	214
UBD/Beta-Prp	8.50e-86	287.4	358	709

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 10   afsdtllvsGsdDgtikvWDlr 31
           +   ++lvsGs Dg+++vWDl+
   Q: 196  N---WRLVSGSQDGKVRVWDLH 214
           3...58**************86 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.............lrslsgheaevtavkfspdgkilvtgseDrtikvw..dls..tgkcvh 88
           ++g+h+s i      pd+slla +   + i++ +v++ ++             l+ l+gh++ + +++ + +g + +tg++D+t+++w  d++  +++c  
   Q: 358  ISGTHDSIIDLTYLLPDRSLLALATNAEDIRIVSVKDSDAnattenstyfgqdLALLKGHDDIIVSLDVDWSGYWVATGAKDNTARLWriDPEnnSFTCYA 458
           68999999995555*************************9************************************************664447699**** PP
   S: 89   tlkghedsvls..................lsfspsgdklvsGshdrtirvwdletgqclee.......tlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
           t++gh++s+ +                  ls  p   +l++Gs+d+t++ wd++ +    +       t + hd+ +n + vhp+g+l++s+s D++v++W
   Q: 459  TFTGHTESIGAvalpkqppqessaqfkdpLSHPP--PFLLTGSQDQTVKKWDIPREAQQGKkggravfTRKAHDKDINAMDVHPSGQLFASSSQDKMVKIW 557
           ***********9********99977777666666..******************99999889*************************************** PP
   S: 165  dlktgkllrtltgghtdsvyslsfdsng..............kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs.........pnderlvsgss 242
           +++ g++   l+g h + v s++f + +                +++gs d+tvklw+l + +c+rt++gh++ v+ v  +         +++  ++s++s
   Q: 558  SVAEGEVQGILRG-HRRGVWSIKFAPAQcpaiqgdegqvagkGVVLTGSADKTVKLWSLTNYTCIRTFEGHSNSVLKVVWLnmpklegkgKKQLQFASAGS 657
           ************9.***************************99999******************************9999989888887777788999*** PP
   S: 243  DgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklk 295
           Dg +++Wd  sg+   tl +h++++++ av + +dn +v+g++ds+v +wk +
   Q: 658  DGLVKVWDANSGEAEATLDNHEDRIWALAV-NSSDNTIVSGDGDSIVTFWKDT 709
           ******************************.999****************965 PP

Organism

Colletotrichum gloeosporioides

Protein Sequence
(Fasta)

MASKQPFKTT FEPEKVIRPI FTGGSVALDN GAKILATPLG EDVILTSPSN GKHLAKIEGD 60
GEQISTLTLT PSGSHLIICS RSLSMKIYAL KTTDDGTIEA KLTRSLKPHG TPVVVLAVDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAGCA AACAACCGTT CAAGACCACT TTCGAACCGG AAAAGGTCAT TCGGCCTATC 60
TTCACCGGAG GCTCTGTTGC ATTGGACAAT GGCGCCAAGA TTTTGGCCAC GCCCCTTGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013934--SSU_processome_Utp13
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08625--Utp13
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000765	Aegilops tauschii	29.87	1.00e-101	362.00
IUUC-Aml-002376	Ailuropoda melanoleuca	29.60	9.00e-108	382.00
IUUC-Atr-002486	Amborella trichopoda	29.55	1.00e-114	405.00
IUUC-Apl-003519	Anas platyrhynchos	28.54	5.00e-96	343.00
IUUC-Aca-004363	Anolis carolinensis	28.04	5.00e-47	180.00
IUUC-Aly-006152	Arabidopsis lyrata	28.82	8.00e-97	346.00
IUUC-Ath-006966	Arabidopsis thaliana	28.20	9.00e-99	353.00
IUUC-Ago-007746	Ashbya gossypii	33.41	2.00e-134	471.00
IUUC-Acl-008009	Aspergillus clavatus	50.27	0.00e+00	887.00
IUUC-Afl-008681	Aspergillus flavus	49.74	0.00e+00	843.00
IUUC-Afu-008798	Aspergillus fumigatus	49.84	0.00e+00	852.00
IUUC-Ani-009278	Aspergillus nidulans	50.37	0.00e+00	897.00
IUUC-Ang-009640	Aspergillus niger	49.68	0.00e+00	858.00
IUUC-Aor-010160	Aspergillus oryzae	49.74	0.00e+00	843.00
IUUC-Ate-010320	Aspergillus terreus	51.29	0.00e+00	895.00
IUUC-Bgr-012054	Blumeria graminis	53.84	0.00e+00	968.00
IUUC-Bta-012611	Bos taurus	30.64	2.00e-107	382.00
IUUC-Bci-013797	Botrytis cinerea	62.24	0.00e+00	1157.00
IUUC-Bdi-014384	Brachypodium distachyon	31.10	1.00e-117	415.00
IUUC-Bol-016483	Brassica oleracea	28.56	2.00e-99	355.00
IUUC-Bra-017798	Brassica rapa	28.77	3.00e-98	351.00
IUUC-Cel-018664	Caenorhabditis elegans	25.77	4.00e-79	287.00
IUUC-Cja-019092	Callithrix jacchus	30.17	7.00e-109	386.00
IUUC-Cfa-021040	Canis familiaris	30.16	5.00e-106	377.00
IUUC-Cpo-022529	Cavia porcellus	31.08	4.00e-105	374.00
IUUC-Cre-022986	Chlamydomonas reinhardtii	42.04	1.00e-32	130.00
IUUC-Csa-024205	Chlorocebus sabaeus	30.58	1.00e-111	395.00
IUUC-Cin-025560	Ciona intestinalis	30.90	2.00e-114	404.00
IUUC-Cne-027082	Cryptococcus neoformans	32.17	5.00e-131	460.00
IUUC-Cme-027159	Cyanidioschyzon merolae	25.25	2.00e-27	116.00
IUUC-Dre-028138	Danio rerio	29.32	5.00e-105	373.00
IUUC-Dno-029914	Dasypus novemcinctus	35.53	3.00e-43	168.00
IUUC-Dor-030685	Dipodomys ordii	32.53	4.00e-73	267.00
IUUC-Dse-031429	Dothistroma septosporum	50.52	0.00e+00	913.00
IUUC-Dme-031995	Drosophila melanogaster	26.06	1.00e-64	239.00
IUUC-Ete-033086	Echinops telfairi	32.77	1.00e-68	253.00
IUUC-Eca-034354	Equus caballus	31.18	7.00e-105	373.00
IUUC-Eeu-034832	Erinaceus europaeus	32.08	2.00e-68	251.00
IUUC-Fca-036136	Felis catus	30.32	2.00e-102	364.00
IUUC-Fal-036859	Ficedula albicollis	29.17	4.00e-109	387.00
IUUC-Fox-037863	Fusarium oxysporum	68.60	0.00e+00	1214.00
IUUC-Fso-038389	Fusarium solani	74.75	0.00e+00	1373.00
IUUC-Gmo-038711	Gadus morhua	28.48	7.00e-94	336.00
IUUC-Ggr-039820	Gaeumannomyces graminis	64.85	0.00e+00	1174.00
IUUC-Gga-040263	Gallus gallus	28.57	2.00e-109	388.00
IUUC-Gac-041291	Gasterosteus aculeatus	30.23	9.00e-113	399.00
IUUC-Gma-044026	Glycine max	28.85	5.00e-111	394.00
IUUC-Ggo-044693	Gorilla gorilla	31.07	3.00e-112	397.00
IUUC-Hsa-046048	Homo sapiens	31.07	2.00e-112	398.00
IUUC-Hvu-047608	Hordeum vulgare	31.16	5.00e-116	410.00
IUUC-Itr-048391	Ictidomys tridecemlineatus	30.47	3.00e-116	410.00
IUUC-Kpa-049209	Komagataella pastoris	33.56	1.00e-139	488.00
IUUC-Lch-050085	Latimeria chalumnae	27.72	3.00e-97	347.00
IUUC-Lpe-050945	Leersia perrieri	30.83	2.00e-115	408.00
IUUC-Loc-052679	Lepisosteus oculatus	31.42	6.00e-125	440.00
IUUC-Laf-053685	Loxodonta africana	30.76	8.00e-101	359.00
IUUC-Mcc-055861	Macaca mulatta	29.74	8.00e-109	386.00
IUUC-Meu-056820	Macropus eugenii	27.88	2.00e-43	169.00
IUUC-Mor-057234	Magnaporthe oryzae	63.57	0.00e+00	1115.00
IUUC-Mpo-057456	Magnaporthe poae	66.28	0.00e+00	931.00
IUUC-Mtr-058122	Medicago truncatula	29.06	5.00e-112	397.00
IUUC-Mla-058980	Melampsora laricipopulina	30.36	1.00e-111	395.00
IUUC-Mga-060080	Meleagris gallopavo	28.63	1.00e-109	389.00
IUUC-Mvi-060338	Microbotryum violaceum	33.40	2.00e-143	501.00
IUUC-Mmr-060762	Microcebus murinus	30.46	3.00e-108	384.00
IUUC-Mdo-061975	Monodelphis domestica	29.45	4.00e-100	357.00
IUUC-Mmu-064038	Mus musculus	31.18	1.00e-109	389.00
IUUC-Mac-065189	Musa acuminata	28.42	5.00e-114	404.00
IUUC-Mpu-066526	Mustela putorius furo	31.36	2.00e-105	375.00
IUUC-Mlu-067716	Myotis lucifugus	30.56	6.00e-118	416.00
IUUC-Nfi-068474	Neosartorya fischeri	50.11	0.00e+00	862.00
IUUC-Ncr-068826	Neurospora crassa	63.75	0.00e+00	1156.00
IUUC-Nle-069832	Nomascus leucogenys	30.42	7.00e-113	399.00
IUUC-Opr-071183	Ochotona princeps	30.47	5.00e-106	377.00
IUUC-Ont-072371	Oreochromis niloticus	30.83	2.00e-115	408.00
IUUC-Oan-073491	Ornithorhynchus anatinus	28.03	5.00e-85	307.00
IUUC-Oba-075963	Oryza barthii	30.39	3.00e-114	404.00
IUUC-Obr-076173	Oryza brachyantha	31.86	6.00e-116	410.00
IUUC-Ogl-077692	Oryza glaberrima	30.39	2.00e-114	404.00
IUUC-Ogu-078965	Oryza glumaepatula	30.44	3.00e-114	404.00
IUUC-Oin-079708	Oryza indica	30.39	2.00e-114	405.00
IUUC-Olo-080679	Oryza longistaminata	29.93	2.00e-114	405.00
IUUC-Oni-082960	Oryza nivara	30.29	5.00e-114	403.00
IUUC-Opu-083282	Oryza punctata	30.69	7.00e-113	399.00
IUUC-Oru-085224	Oryza rufipogon	30.39	2.00e-114	405.00
IUUC-Osa-085320	Oryza sativa	30.39	2.00e-114	405.00
IUUC-Ola-086370	Oryzias latipes	28.09	1.00e-38	152.00
IUUC-Olu-087814	Ostreococcus lucimarinus	28.09	2.00e-77	282.00
IUUC-Oga-088458	Otolemur garnettii	30.90	1.00e-115	408.00
IUUC-Oar-090032	Ovis aries	28.73	2.00e-76	278.00
IUUC-Ptr-090749	Pan troglodytes	31.07	8.00e-114	402.00
IUUC-Pan-091691	Papio anubis	29.29	4.00e-100	357.00
IUUC-Psi-093200	Pelodiscus sinensis	28.87	1.00e-105	375.00
IUUC-Pma-094165	Petromyzon marinus	28.97	2.00e-81	295.00
IUUC-Pno-095048	Phaeosphaeria nodorum	54.61	0.00e+00	809.00
IUUC-Ppa-095336	Physcomitrella patens	30.92	2.00e-108	385.00
IUUC-Pfo-096132	Poecilia formosa	29.46	3.00e-104	371.00
IUUC-Pab-097855	Pongo abelii	30.42	1.00e-111	395.00
IUUC-Pop-099434	Populus trichocarpa	28.60	2.00e-103	368.00
IUUC-Pca-100232	Procavia capensis	31.34	5.00e-37	147.00
IUUC-Ppe-101665	Prunus persica	30.18	8.00e-113	399.00
IUUC-Pva-102178	Pteropus vampyrus	30.32	1.00e-111	395.00
IUUC-Pgr-103288	Puccinia graminis	27.79	3.00e-98	351.00
IUUC-Ptt-103808	Puccinia triticina	29.25	2.00e-90	325.00
IUUC-Pte-104205	Pyrenophora teres	55.03	0.00e+00	962.00
IUUC-Pyt-104658	Pyrenophora triticirepentis	53.09	0.00e+00	913.00
IUUC-Rno-105617	Rattus norvegicus	31.67	5.00e-111	393.00
IUUC-Sce-106281	Saccharomyces cerevisiae	34.64	2.00e-144	504.00
IUUC-Sha-107378	Sarcophilus harrisii	30.33	1.00e-100	359.00
IUUC-Sja-107718	Schizosaccharomyces japonicus	38.04	2.00e-157	548.00
IUUC-Spo-108361	Schizosaccharomyces pombe	35.89	8.00e-143	499.00
IUUC-Ssl-108592	Sclerotinia sclerotiorum	63.71	0.00e+00	1194.00
IUUC-Smo-109257	Selaginella moellendorffii	32.42	3.00e-119	421.00
IUUC-Sit-110258	Setaria italica	31.74	1.00e-122	432.00
IUUC-Sly-111521	Solanum lycopersicum	29.08	3.00e-106	377.00
IUUC-Stu-112718	Solanum tuberosum	32.74	6.00e-22	94.40
IUUC-Sbi-114768	Sorghum bicolor	29.83	6.00e-117	413.00
IUUC-Sre-115159	Sporisorium reilianum	30.43	5.00e-91	327.00
IUUC-Ssc-116342	Sus scrofa	26.75	1.00e-51	196.00
IUUC-Tgu-117320	Taeniopygia guttata	27.74	5.00e-100	357.00
IUUC-Tru-118024	Takifugu rubripes	29.74	7.00e-108	383.00
IUUC-Tni-119971	Tetraodon nigroviridis	29.82	3.00e-105	374.00
IUUC-Tca-121248	Theobroma cacao	29.33	2.00e-113	401.00
IUUC-Tre-122079	Trichoderma reesei	71.33	0.00e+00	1299.00
IUUC-Tvi-122554	Trichoderma virens	70.09	0.00e+00	1273.00
IUUC-Tae-123690	Triticum aestivum	31.45	2.00e-117	414.00
IUUC-Tur-126436	Triticum urartu	31.91	5.00e-97	347.00
IUUC-Tme-126942	Tuber melanosporum	48.09	0.00e+00	752.00
IUUC-Ttr-128964	Tursiops truncatus	30.32	1.00e-108	385.00
IUUC-Uma-129473	Ustilago maydis	30.46	1.00e-99	356.00
IUUC-Vda-129749	Verticillium dahliae	74.61	0.00e+00	1258.00
IUUC-Vvi-131511	Vitis vinifera	28.85	6.00e-105	373.00
IUUC-Xtr-132816	Xenopus tropicalis	27.58	8.00e-80	290.00
IUUC-Xma-133672	Xiphophorus maculatus	28.91	2.00e-105	375.00
IUUC-Yli-134602	Yarrowia lipolytica	40.41	4.00e-176	610.00
IUUC-Zma-135559	Zea mays	31.40	8.00e-112	396.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence