iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Spo-108334

Ensembl Protein ID

SPAC4F10.18.1:pep

UniProt Accession

O36030; YEKI_SCHPO

Genbank Protein ID

CAB11721.1

Protein Name

Uncharacterized WD repeat-containing protein C4F10.18

Genbank Nucleotide ID

CU329670

Gene Name

nup37; SPAC4F10.18

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SPAC4F10.18	SPAC4F10.18.1	SPAC4F10.18.1:pep

Annotation

mRNA Expression
GEO
Protein 3D Structure
PDB	MMDB
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-08	31.9	155	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 14   tllvsGsdDgtikvWDlrtgv 34
             ++s +dD+t+ +W+l++  
   Q: 155  QVIASVGDDCTLIIWRLTDEG 175
           349**************9875 PP

Organism

Schizosaccharomyces pombe

Protein Sequence
(Fasta)

MTLSSNQYQL PLNVRPYTTT WCSQSPSCSN LLAIGHDTGI TIYCASEEQT PGSTGLTLQE 60
LFTIQTGLPT LHLSFSSSCS YSENLHDGDG NVNSSPVYSL FLACVCQDNT VRLIITKNET 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTAGTTTTG GCTCCGTAAG GTAGAACGTT TTCTTCAGCT TCATCCAATT CACGTAACCC 60
ACTAGTTACC TGCAACACCA TATCACTAGA AAACGTGGCC GAAACTTCTC TTTTTCCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005643--C:nuclear pore
GO:0031080--C:nuclear pore outer ring
GO:0005634--C:nucleus

KEGG

spo:SPAC4F10.18

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002109	Ailuropoda melanoleuca	33.58	1.00e-09	55.10
IUUC-Aca-004272	Anolis carolinensis	33.58	6.00e-11	59.70
IUUC-Bta-012525	Bos taurus	27.23	7.00e-10	55.80
IUUC-Cfa-020623	Canis familiaris	28.25	3.00e-10	57.00
IUUC-Cpo-021545	Cavia porcellus	28.31	2.00e-10	57.40
IUUC-Csa-023698	Chlorocebus sabaeus	27.98	9.00e-10	55.50
IUUC-Cho-024401	Choloepus hoffmanni	31.34	3.00e-09	53.50
IUUC-Dor-031077	Dipodomys ordii	36.36	7.00e-10	55.80
IUUC-Dme-031831	Drosophila melanogaster	31.58	1.00e-09	55.10
IUUC-Ete-032819	Echinops telfairi	32.62	4.00e-10	56.60
IUUC-Eca-033212	Equus caballus	27.23	7.00e-10	55.80
IUUC-Fca-036071	Felis catus	28.12	2.00e-10	57.40
IUUC-Fal-036718	Ficedula albicollis	36.28	3.00e-10	57.00
IUUC-Gga-041026	Gallus gallus	37.17	8.00e-11	58.90
IUUC-Ggo-045372	Gorilla gorilla	27.98	7.00e-10	55.80
IUUC-Hsa-046002	Homo sapiens	27.98	1.00e-09	55.50
IUUC-Itr-048542	Ictidomys tridecemlineatus	27.35	7.00e-10	55.80
IUUC-Lch-049456	Latimeria chalumnae	38.55	6.00e-09	52.80
IUUC-Laf-053514	Loxodonta africana	35.51	2.00e-09	54.70
IUUC-Mcc-055148	Macaca mulatta	27.98	1.00e-09	55.50
IUUC-Meu-056644	Macropus eugenii	34.58	1.00e-09	55.50
IUUC-Mla-059029	Melampsora laricipopulina	26.27	1.00e-07	48.90
IUUC-Mga-060061	Meleagris gallopavo	36.28	3.00e-10	57.40
IUUC-Mmr-061448	Microcebus murinus	28.57	3.00e-10	57.00
IUUC-Mdo-063006	Monodelphis domestica	33.08	4.00e-10	56.60
IUUC-Mmu-063269	Mus musculus	27.23	1.00e-10	58.20
IUUC-Mpu-066663	Mustela putorius furo	28.17	6.00e-10	56.20
IUUC-Nle-069989	Nomascus leucogenys	27.98	1.00e-09	55.50
IUUC-Ont-072544	Oreochromis niloticus	27.56	6.00e-09	52.80
IUUC-Oan-073360	Ornithorhynchus anatinus	38.55	3.00e-09	53.90
IUUC-Oar-089696	Ovis aries	27.68	5.00e-10	56.20
IUUC-Ptr-091333	Pan troglodytes	27.98	1.00e-09	55.50
IUUC-Pan-091814	Papio anubis	27.98	1.00e-09	55.50
IUUC-Psi-093497	Pelodiscus sinensis	34.72	4.00e-10	57.00
IUUC-Pab-098451	Pongo abelii	27.98	1.00e-09	55.50
IUUC-Pca-101057	Procavia capensis	34.00	6.00e-06	42.40
IUUC-Pva-102866	Pteropus vampyrus	27.68	2.00e-10	58.20
IUUC-Pgr-103570	Puccinia graminis	24.20	1.00e-05	42.00
IUUC-Rno-106000	Rattus norvegicus	27.23	4.00e-11	60.10
IUUC-Sha-106639	Sarcophilus harrisii	33.85	3.00e-10	57.00
IUUC-Sja-108011	Schizosaccharomyces japonicus	41.16	2.00e-82	297.00
IUUC-Tgu-116575	Taeniopygia guttata	35.40	1.00e-09	55.10
IUUC-Tsy-118870	Tarsius syrichta	34.33	5.00e-10	56.20
IUUC-Vpa-130328	Vicugna pacos	35.07	1.00e-10	58.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence