iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022626

Ensembl Protein ID

EDO98647

UniProt Accession

A8JBV1; A8JBV1_CHLRE

Genbank Protein ID

EDO98647.1

Protein Name

Vacuolar assembly protein

Genbank Nucleotide ID

DS496154

Gene Name

VPS41; CHLREDRAFT_195511

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_195511	EDO98647	EDO98647

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	28.61	3.00e-40	164.00	IUUC-Hsa-047030

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MAEEHSTCCA VEPQLKYDIL GGDTSSIISK ERITCMTLSE KILALGTEQG RIHVLDYSGN 60
QVQVRQLNVH KTRVNDISFD KDGEHVTNLY TEQVTRHEFR TPVKANQSTI YIRRPSPVSL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGAGG AGCATTCGAC CTGCTGCGCG GTCGAACCGC AGCTCAAGTA TGACATTCTA 60
GGTGGCGACA CCAGCAGCAT CATAAGCAAA GAGAGGATAA CATGCATGAC CTTGTCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000547--Clathrin_H-chain/VPS_repeat
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR017986--WD40_repeat_dom

Pfam

PF00637--Clathrin

Gene Ontology

GO:0033263--C:CORVET complex
GO:0030897--C:HOPS complex
GO:0005770--C:late endosome
GO:0051020--F:GTPase binding
GO:0006623--P:protein targeting to vacuole
GO:0035542--P:regulation of SNARE complex assembly
GO:0042144--P:vacuole fusion, non-autophagic
GO:0016192--P:vesicle-mediated transport

KEGG

cre:CHLREDRAFT_195511

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000207	Aegilops tauschii	30.66	2.00e-33	135.00
IUUC-Aml-001435	Ailuropoda melanoleuca	28.30	9.00e-48	183.00
IUUC-Atr-002975	Amborella trichopoda	31.70	6.00e-48	184.00
IUUC-Apl-003254	Anas platyrhynchos	28.30	4.00e-47	181.00
IUUC-Aca-005067	Anolis carolinensis	27.82	5.00e-46	177.00
IUUC-Aly-005839	Arabidopsis lyrata	35.41	2.00e-36	145.00
IUUC-Ath-006625	Arabidopsis thaliana	35.41	2.00e-36	146.00
IUUC-Ago-007960	Ashbya gossypii	33.94	3.00e-11	62.40
IUUC-Acl-008174	Aspergillus clavatus	38.39	6.00e-20	91.70
IUUC-Afl-008524	Aspergillus flavus	36.61	2.00e-18	86.70
IUUC-Afu-009054	Aspergillus fumigatus	37.50	1.00e-18	87.40
IUUC-Ani-009250	Aspergillus nidulans	38.71	9.00e-15	74.70
IUUC-Ang-009665	Aspergillus niger	37.50	4.00e-18	85.50
IUUC-Aor-010230	Aspergillus oryzae	36.61	2.00e-18	86.70
IUUC-Ate-010464	Aspergillus terreus	34.25	2.00e-18	86.70
IUUC-Ame-011311	Astyanax mexicanus	23.45	1.00e-26	113.00
IUUC-Bgr-012099	Blumeria graminis	39.66	2.00e-20	93.60
IUUC-Bta-013327	Bos taurus	29.02	5.00e-48	184.00
IUUC-Bci-013660	Botrytis cinerea	37.63	6.00e-15	75.10
IUUC-Bdi-014641	Brachypodium distachyon	28.30	4.00e-44	171.00
IUUC-Bol-015685	Brassica oleracea	30.66	1.00e-49	189.00
IUUC-Bra-016918	Brassica rapa	30.66	1.00e-49	189.00
IUUC-Cel-018385	Caenorhabditis elegans	19.12	8.00e-16	77.40
IUUC-Cja-018994	Callithrix jacchus	29.02	9.00e-48	183.00
IUUC-Cfa-020405	Canis familiaris	28.54	5.00e-47	181.00
IUUC-Cpo-022163	Cavia porcellus	29.16	1.00e-47	183.00
IUUC-Csa-023134	Chlorocebus sabaeus	29.02	7.00e-48	184.00
IUUC-Cho-024913	Choloepus hoffmanni	27.95	9.00e-24	103.00
IUUC-Cin-025239	Ciona intestinalis	28.85	2.00e-42	166.00
IUUC-Cgl-026706	Colletotrichum gloeosporioides	38.71	6.00e-15	75.10
IUUC-Cne-026799	Cryptococcus neoformans	24.77	2.00e-28	120.00
IUUC-Cme-027200	Cyanidioschyzon merolae	34.38	1.00e-03	37.00
IUUC-Dre-028115	Danio rerio	29.16	2.00e-48	185.00
IUUC-Dor-030947	Dipodomys ordii	28.95	6.00e-48	184.00
IUUC-Dse-031544	Dothistroma septosporum	32.17	9.00e-14	71.20
IUUC-Dme-031830	Drosophila melanogaster	25.67	4.00e-30	124.00
IUUC-Ete-033051	Echinops telfairi	43.75	5.00e-25	107.00
IUUC-Eca-033501	Equus caballus	29.02	1.00e-47	183.00
IUUC-Eeu-034555	Erinaceus europaeus	45.00	2.00e-15	75.90
IUUC-Fca-035809	Felis catus	28.54	1.00e-47	182.00
IUUC-Fal-037056	Ficedula albicollis	28.30	7.00e-47	180.00
IUUC-Fox-037949	Fusarium oxysporum	31.62	8.00e-14	71.60
IUUC-Fso-038282	Fusarium solani	35.05	7.00e-14	71.60
IUUC-Gmo-038540	Gadus morhua	29.47	4.00e-50	191.00
IUUC-Ggr-039733	Gaeumannomyces graminis	41.38	3.00e-20	93.20
IUUC-Gga-040446	Gallus gallus	28.06	3.00e-46	178.00
IUUC-Gac-041462	Gasterosteus aculeatus	29.16	2.00e-48	185.00
IUUC-Gma-043148	Glycine max	31.13	3.00e-45	175.00
IUUC-Hsa-047030	Homo sapiens	29.02	6.00e-48	184.00
IUUC-Hvu-047693	Hordeum vulgare	28.54	4.00e-46	178.00
IUUC-Itr-048318	Ictidomys tridecemlineatus	29.02	8.00e-48	183.00
IUUC-Kpa-049224	Komagataella pastoris	30.65	1.00e-13	70.10
IUUC-Lch-049444	Latimeria chalumnae	29.47	7.00e-51	193.00
IUUC-Lpe-050942	Leersia perrieri	32.76	1.00e-43	170.00
IUUC-Loc-052260	Lepisosteus oculatus	28.50	1.00e-47	183.00
IUUC-Lma-053173	Leptosphaeria maculans	39.13	2.00e-14	73.60
IUUC-Laf-054185	Loxodonta africana	29.02	1.00e-47	183.00
IUUC-Mcc-054816	Macaca mulatta	29.02	7.00e-48	184.00
IUUC-Meu-056483	Macropus eugenii	45.54	2.00e-25	109.00
IUUC-Mor-056979	Magnaporthe oryzae	33.12	3.00e-20	92.80
IUUC-Mpo-057312	Magnaporthe poae	40.52	3.00e-20	92.80
IUUC-Mtr-057630	Medicago truncatula	27.59	2.00e-42	166.00
IUUC-Mga-059942	Meleagris gallopavo	28.06	2.00e-46	179.00
IUUC-Mvi-060386	Microbotryum violaceum	42.48	3.00e-22	99.40
IUUC-Mmr-060640	Microcebus murinus	29.02	1.00e-47	182.00
IUUC-Mdo-062934	Monodelphis domestica	27.78	1.00e-15	76.60
IUUC-Mmu-063488	Mus musculus	28.78	2.00e-47	182.00
IUUC-Mac-064975	Musa acuminata	30.19	3.00e-47	181.00
IUUC-Mpu-065777	Mustela putorius furo	29.02	7.00e-48	184.00
IUUC-Mlu-068052	Myotis lucifugus	29.02	4.00e-48	184.00
IUUC-Nfi-068436	Neosartorya fischeri	38.39	7.00e-20	91.70
IUUC-Ncr-068840	Neurospora crassa	36.28	1.00e-19	90.90
IUUC-Nle-070063	Nomascus leucogenys	28.78	6.00e-46	177.00
IUUC-Opr-070385	Ochotona princeps	28.01	2.00e-28	119.00
IUUC-Ont-072367	Oreochromis niloticus	28.92	7.00e-49	187.00
IUUC-Oan-073085	Ornithorhynchus anatinus	27.82	2.00e-40	159.00
IUUC-Ocu-074672	Oryctolagus cuniculus	29.40	6.00e-49	187.00
IUUC-Oba-075574	Oryza barthii	29.95	7.00e-48	184.00
IUUC-Obr-076203	Oryza brachyantha	28.54	7.00e-46	177.00
IUUC-Ogl-077909	Oryza glaberrima	29.95	7.00e-48	184.00
IUUC-Ogu-078053	Oryza glumaepatula	29.95	2.00e-47	182.00
IUUC-Oin-079700	Oryza indica	29.72	7.00e-47	180.00
IUUC-Olo-080707	Oryza longistaminata	29.95	2.00e-47	182.00
IUUC-Oni-082754	Oryza nivara	29.72	6.00e-47	181.00
IUUC-Opu-083854	Oryza punctata	29.72	1.00e-46	179.00
IUUC-Oru-085071	Oryza rufipogon	29.95	6.00e-48	184.00
IUUC-Osa-085370	Oryza sativa	29.95	7.00e-48	184.00
IUUC-Ola-086362	Oryzias latipes	28.43	1.00e-46	179.00
IUUC-Oga-088078	Otolemur garnettii	28.06	5.00e-47	181.00
IUUC-Oar-089679	Ovis aries	29.02	5.00e-48	184.00
IUUC-Ptr-091680	Pan troglodytes	29.02	6.00e-48	184.00
IUUC-Pan-092816	Papio anubis	29.02	5.00e-48	183.00
IUUC-Psi-093890	Pelodiscus sinensis	27.95	2.00e-47	182.00
IUUC-Pma-094654	Petromyzon marinus	30.43	3.00e-50	192.00
IUUC-Pno-095071	Phaeosphaeria nodorum	38.26	3.00e-18	86.30
IUUC-Ppa-095198	Physcomitrella patens	30.14	8.00e-44	170.00
IUUC-Pfo-097465	Poecilia formosa	28.43	4.00e-46	177.00
IUUC-Pab-098686	Pongo abelii	28.78	2.00e-47	182.00
IUUC-Pop-099281	Populus trichocarpa	30.19	3.00e-48	185.00
IUUC-Pca-100990	Procavia capensis	26.81	4.00e-36	144.00
IUUC-Ppe-101500	Prunus persica	29.95	3.00e-48	185.00
IUUC-Pva-102809	Pteropus vampyrus	29.26	1.00e-47	183.00
IUUC-Pgr-103404	Puccinia graminis	38.03	2.00e-22	99.80
IUUC-Ptt-103952	Puccinia triticina	35.76	7.00e-23	101.00
IUUC-Pte-104216	Pyrenophora teres	37.50	7.00e-19	88.20
IUUC-Rno-105949	Rattus norvegicus	28.54	7.00e-47	180.00
IUUC-Sce-106462	Saccharomyces cerevisiae	31.15	2.00e-12	66.60
IUUC-Sha-106689	Sarcophilus harrisii	28.78	1.00e-46	179.00
IUUC-Sja-107696	Schizosaccharomyces japonicus	22.56	6.00e-20	91.30
IUUC-Spo-108173	Schizosaccharomyces pombe	24.70	4.00e-28	118.00
IUUC-Smo-109505	Selaginella moellendorffii	27.76	4.00e-35	141.00
IUUC-Sit-110176	Setaria italica	29.48	5.00e-48	184.00
IUUC-Sly-111671	Solanum lycopersicum	31.37	5.00e-48	184.00
IUUC-Sar-113073	Sorex araneus	29.02	6.00e-48	184.00
IUUC-Sbi-114139	Sorghum bicolor	29.48	4.00e-47	181.00
IUUC-Sre-115158	Sporisorium reilianum	26.98	4.00e-38	152.00
IUUC-Ssc-115894	Sus scrofa	28.92	7.00e-47	180.00
IUUC-Tgu-117481	Taeniopygia guttata	28.30	6.00e-47	180.00
IUUC-Tru-118468	Takifugu rubripes	27.29	5.00e-47	181.00
IUUC-Tni-120478	Tetraodon nigroviridis	28.02	3.00e-48	185.00
IUUC-Tca-121780	Theobroma cacao	30.42	7.00e-49	187.00
IUUC-Tre-121900	Trichoderma reesei	36.52	2.00e-18	86.70
IUUC-Tvi-122343	Trichoderma virens	36.52	1.00e-18	87.40
IUUC-Tae-125764	Triticum aestivum	28.77	3.00e-46	178.00
IUUC-Tur-126430	Triticum urartu	28.77	9.00e-47	180.00
IUUC-Tme-127007	Tuber melanosporum	40.18	4.00e-20	92.40
IUUC-Tbe-128073	Tupaia belangeri	29.02	5.00e-48	184.00
IUUC-Ttr-128879	Tursiops truncatus	29.02	1.00e-47	183.00
IUUC-Uma-129356	Ustilago maydis	28.84	4.00e-41	162.00
IUUC-Vda-129676	Verticillium dahliae	36.56	8.00e-14	71.60
IUUC-Vvi-131744	Vitis vinifera	31.60	7.00e-49	187.00
IUUC-Xtr-132093	Xenopus tropicalis	28.54	1.00e-48	186.00
IUUC-Xma-133199	Xiphophorus maculatus	29.23	1.00e-49	189.00
IUUC-Yli-134385	Yarrowia lipolytica	34.43	2.00e-13	69.70
IUUC-Zma-135567	Zea mays	29.07	1.00e-45	176.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence