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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Rno-105170
UUCD1 version UUC-RaN-00535
Ensembl Protein ID ENSRNOP00000059648.3
UniProt Accession F1LRQ3; F1LRQ3_RAT
Genbank Protein ID ENSRNOP00000059648
Protein Name Ring finger protein 180
Genbank Nucleotide ID AABR07007937
Gene Name Rnf180
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000043329.3 ENSRNOT00000066069.3 ENSRNOP00000059648.3
Annotation
mRNA Expression
ArrayExpress
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 79.97 0.00e+00 914.00 IUUC-Hsa-045752
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MRRSEESTGT QSSEEQTGAL RCWRCRKCIA SSGCFMSPLE TQAVEDDLDH SLSPQNTCHL 60
WPHEHRTLPA WLTIVVPEAQ WTVGKLNCPF CGARLGGFNF VSTPKCSCGQ LAAVHLCKSR 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-105170|E3,RING|Rattus norvegicus
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Nucleotide Sequence
(Fasta)
ATGAGAAGAA GTGAAGAGTC GACAGGCACG CAGAGCAGTG AGGAGCAGAC AGGAGCCCTT 60
CGTTGCTGGA GATGTAGAAA ATGCATCGCA AGTTCTGGTT GCTTCATGAG TCCTCTTGAG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-105170|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR033263--RNF180
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005622--C:intracellular
GO:0031227--C:intrinsic component of endoplasmic reticulum membrane
GO:0031624--F:ubiquitin conjugating enzyme binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0030534--P:adult behavior
GO:0042415--P:norepinephrine metabolic process
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0031398--P:positive regulation of protein ubiquitination
GO:0000209--P:protein polyubiquitination
GO:0050790--P:regulation of catalytic activity
GO:0042428--P:serotonin metabolic process

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002250 Ailuropoda melanoleuca 74.78 0.00e+00 851.00
IUUC-Apl-003598 Anas platyrhynchos 48.61 4.00e-134 471.00
IUUC-Aca-004364 Anolis carolinensis 44.41 1.00e-126 446.00
IUUC-Ame-011498 Astyanax mexicanus 70.44 9.00e-68 249.00
IUUC-Bta-012990 Bos taurus 74.27 0.00e+00 855.00
IUUC-Bci-013759 Botrytis cinerea 32.05 6.00e-06 45.40
IUUC-Cja-019420 Callithrix jacchus 79.27 0.00e+00 907.00
IUUC-Cfa-020028 Canis familiaris 75.99 0.00e+00 869.00
IUUC-Cpo-021698 Cavia porcellus 70.16 0.00e+00 667.00
IUUC-Csa-023637 Chlorocebus sabaeus 78.76 0.00e+00 899.00
IUUC-Cho-025073 Choloepus hoffmanni 62.28 0.00e+00 674.00
IUUC-Dre-027523 Danio rerio 71.71 3.00e-68 251.00
IUUC-Dno-030040 Dasypus novemcinctus 68.25 1.00e-178 619.00
IUUC-Dor-030405 Dipodomys ordii 76.72 0.00e+00 858.00
IUUC-Eca-033366 Equus caballus 77.55 0.00e+00 903.00
IUUC-Fca-035526 Felis catus 80.98 0.00e+00 716.00
IUUC-Fal-037590 Ficedula albicollis 46.31 3.00e-130 458.00
IUUC-Gmo-039484 Gadus morhua 51.97 1.00e-42 167.00
IUUC-Gga-040136 Gallus gallus 47.54 5.00e-139 488.00
IUUC-Gac-041811 Gasterosteus aculeatus 51.59 2.00e-41 163.00
IUUC-Ggo-044673 Gorilla gorilla 79.27 0.00e+00 916.00
IUUC-Hsa-045752 Homo sapiens 79.97 0.00e+00 922.00
IUUC-Itr-047971 Ictidomys tridecemlineatus 77.89 0.00e+00 907.00
IUUC-Lch-050309 Latimeria chalumnae 45.21 3.00e-117 415.00
IUUC-Loc-052203 Lepisosteus oculatus 42.76 2.00e-108 386.00
IUUC-Laf-053398 Loxodonta africana 74.27 0.00e+00 848.00
IUUC-Mcc-054745 Macaca mulatta 80.83 0.00e+00 933.00
IUUC-Mmr-060583 Microcebus murinus 79.27 0.00e+00 928.00
IUUC-Mdo-062873 Monodelphis domestica 60.07 0.00e+00 680.00
IUUC-Mmu-063393 Mus musculus 88.07 0.00e+00 857.00
IUUC-Mac-065655 Musa acuminata 27.50 1.00e-07 50.40
IUUC-Mpu-066186 Mustela putorius furo 72.93 0.00e+00 850.00
IUUC-Mlu-068079 Myotis lucifugus 74.01 0.00e+00 845.00
IUUC-Nle-069164 Nomascus leucogenys 80.31 0.00e+00 928.00
IUUC-Opr-070362 Ochotona princeps 69.43 0.00e+00 741.00
IUUC-Oan-073509 Ornithorhynchus anatinus 48.44 3.00e-52 198.00
IUUC-Ocu-073894 Oryctolagus cuniculus 65.70 1.00e-171 596.00
IUUC-Oga-088485 Otolemur garnettii 78.41 0.00e+00 889.00
IUUC-Oar-089831 Ovis aries 72.71 0.00e+00 855.00
IUUC-Ptr-091570 Pan troglodytes 80.14 0.00e+00 926.00
IUUC-Psi-093962 Pelodiscus sinensis 50.43 2.00e-156 545.00
IUUC-Pfo-096369 Poecilia formosa 67.92 2.00e-62 232.00
IUUC-Pab-098224 Pongo abelii 65.11 0.00e+00 684.00
IUUC-Pca-100186 Procavia capensis 71.68 0.00e+00 773.00
IUUC-Pva-102511 Pteropus vampyrus 77.03 0.00e+00 904.00
IUUC-Sha-107501 Sarcophilus harrisii 63.86 0.00e+00 633.00
IUUC-Ssc-115668 Sus scrofa 72.16 0.00e+00 765.00
IUUC-Tgu-117098 Taeniopygia guttata 47.26 3.00e-126 445.00
IUUC-Tru-118625 Takifugu rubripes 70.75 7.00e-62 229.00
IUUC-Tsy-118959 Tarsius syrichta 76.68 0.00e+00 870.00
IUUC-Tni-120324 Tetraodon nigroviridis 34.02 2.00e-32 133.00
IUUC-Tbe-127448 Tupaia belangeri 81.04 0.00e+00 806.00
IUUC-Ttr-128470 Tursiops truncatus 73.92 0.00e+00 815.00
IUUC-Vpa-130097 Vicugna pacos 76.74 0.00e+00 808.00
IUUC-Xtr-132848 Xenopus tropicalis 40.75 5.00e-101 361.00
Created Date 25-Jun-2017

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