• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Ssc-115352
UUCD1 version UUC-SuS-00202
Ensembl Protein ID ENSSSCP00000006329.1
UniProt Accession F1RSM4; F1RSM4_PIG
Genbank Protein ID ENSSSCP00000006329
Protein Name Ribosome biogenesis protein BOP1; Block of proliferation 1 protein
Genbank Nucleotide ID FP085492
Gene Name BOP1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000005920.1 ENSSSCT00000006500.1 ENSSSCP00000006329.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 4.40e-16 58.7 282 321
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllks 38
           gH+d v+cl+  ++   l+sGsdDg++++W+  t +++++
   Q: 282  GHSDLVRCLSVsPGgQWLASGSDDGSVRLWEAATARCVRT 321
           8**********988899****************9999875 PP
   
Organism Sus scrofa
Functional Description
(View)

Functional Description


     Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
 Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
Protein Sequence
(Fasta)
QDIRNTVGNV PLAWYEDFPH VGYDLDGRRI YKPLRTQDEL DQFLDKMDNP DYWRTVQDRT 60
TGHDVRLTDE QVALVQRLQR GQFGDVSFDP YEPSVDFFSG DLMIHPVTNR PADKRSFIPS 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ssc-115352|E3,WD_repeat|Sus scrofa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CAGGACATCC GGAACACAGT GGGCAATGTG CCCTTGGCGT GGTACGAGGA CTTCCCCCAT 60
GTGGGCTACG ACCTGGATGG CAGACGCATC TACAAGCCCC TCCGCACCCA GGATGAGCTG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ssc-115352|E3,WD_repeat|Sus scrofa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat
Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF08145--BOP1NT
PF00400--WD40
SMART

SM01035--BOP1NT
SM00320--WD40
Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0003723--F:RNA binding
GO:0008283--P:cell proliferation
GO:0000448--P:cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0051726--P:regulation of cell cycle
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001158 Aegilops tauschii 41.74 3.00e-124 439.00
IUUC-Aml-001507 Ailuropoda melanoleuca 86.67 0.00e+00 1027.00
IUUC-Atr-003141 Amborella trichopoda 41.12 6.00e-87 314.00
IUUC-Apl-003545 Anas platyrhynchos 66.67 0.00e+00 797.00
IUUC-Aly-005649 Arabidopsis lyrata 44.07 9.00e-155 540.00
IUUC-Ath-007625 Arabidopsis thaliana 44.81 1.00e-153 536.00
IUUC-Ago-007958 Ashbya gossypii 42.92 6.00e-159 554.00
IUUC-Acl-008344 Aspergillus clavatus 43.32 9.00e-140 490.00
IUUC-Afl-008616 Aspergillus flavus 42.64 1.00e-142 500.00
IUUC-Afu-009083 Aspergillus fumigatus 44.84 1.00e-137 483.00
IUUC-Ani-009365 Aspergillus nidulans 43.26 3.00e-143 501.00
IUUC-Ang-009796 Aspergillus niger 43.41 4.00e-138 485.00
IUUC-Aor-010015 Aspergillus oryzae 42.64 1.00e-142 500.00
IUUC-Ate-010537 Aspergillus terreus 43.48 2.00e-144 505.00
IUUC-Ame-011767 Astyanax mexicanus 68.80 8.00e-109 385.00
IUUC-Bgr-012286 Blumeria graminis 42.70 9.00e-148 516.00
IUUC-Bta-013569 Bos taurus 91.87 0.00e+00 1098.00
IUUC-Bci-013820 Botrytis cinerea 42.45 3.00e-141 495.00
IUUC-Bdi-014895 Brachypodium distachyon 45.31 7.00e-154 537.00
IUUC-Bol-016099 Brassica oleracea 44.41 2.00e-156 546.00
IUUC-Bra-017174 Brassica rapa 44.25 3.00e-156 546.00
IUUC-Cel-018201 Caenorhabditis elegans 46.55 7.00e-155 540.00
IUUC-Cja-019009 Callithrix jacchus 77.47 0.00e+00 924.00
IUUC-Cfa-020173 Canis familiaris 85.90 0.00e+00 1011.00
IUUC-Cpo-021796 Cavia porcellus 89.27 0.00e+00 1050.00
IUUC-Cre-022650 Chlamydomonas reinhardtii 49.60 1.00e-156 546.00
IUUC-Csa-023440 Chlorocebus sabaeus 91.38 0.00e+00 1123.00
IUUC-Cin-025782 Ciona intestinalis 55.15 0.00e+00 749.00
IUUC-Csv-026352 Ciona savignyi 55.98 0.00e+00 738.00
IUUC-Cgl-026393 Colletotrichum gloeosporioides 38.67 3.00e-112 399.00
IUUC-Cne-027004 Cryptococcus neoformans 44.94 9.00e-167 580.00
IUUC-Cme-027242 Cyanidioschyzon merolae 39.41 1.00e-121 429.00
IUUC-Dre-028658 Danio rerio 72.82 0.00e+00 961.00
IUUC-Dno-028883 Dasypus novemcinctus 90.44 0.00e+00 1083.00
IUUC-Dor-031031 Dipodomys ordii 88.82 0.00e+00 1102.00
IUUC-Dse-031443 Dothistroma septosporum 40.37 1.00e-141 496.00
IUUC-Dme-031786 Drosophila melanogaster 53.26 0.00e+00 714.00
IUUC-Eca-033677 Equus caballus 92.36 0.00e+00 1103.00
IUUC-Eeu-035310 Erinaceus europaeus 87.20 0.00e+00 890.00
IUUC-Fca-035888 Felis catus 89.12 0.00e+00 1082.00
IUUC-Fal-037438 Ficedula albicollis 69.50 0.00e+00 733.00
IUUC-Fox-037973 Fusarium oxysporum 43.53 4.00e-155 541.00
IUUC-Fso-038187 Fusarium solani 43.17 1.00e-152 533.00
IUUC-Gmo-039114 Gadus morhua 65.05 0.00e+00 819.00
IUUC-Ggr-039746 Gaeumannomyces graminis 42.05 7.00e-150 524.00
IUUC-Gga-040631 Gallus gallus 72.57 8.00e-148 516.00
IUUC-Gac-042582 Gasterosteus aculeatus 67.47 0.00e+00 860.00
IUUC-Gma-044215 Glycine max 46.19 4.00e-152 531.00
IUUC-Ggo-045587 Gorilla gorilla 92.06 0.00e+00 1132.00
IUUC-Hsa-046319 Homo sapiens 92.03 0.00e+00 1130.00
IUUC-Hvu-047526 Hordeum vulgare 45.04 7.00e-147 513.00
IUUC-Itr-048683 Ictidomys tridecemlineatus 90.24 0.00e+00 1092.00
IUUC-Kpa-049221 Komagataella pastoris 41.26 3.00e-151 528.00
IUUC-Lch-049640 Latimeria chalumnae 72.93 0.00e+00 977.00
IUUC-Lpe-051135 Leersia perrieri 43.00 8.00e-136 477.00
IUUC-Loc-051930 Lepisosteus oculatus 72.24 0.00e+00 977.00
IUUC-Lma-053290 Leptosphaeria maculans 42.65 6.00e-138 484.00
IUUC-Laf-053903 Loxodonta africana 83.47 0.00e+00 968.00
IUUC-Mcc-055471 Macaca mulatta 91.06 0.00e+00 1120.00
IUUC-Meu-056190 Macropus eugenii 84.25 0.00e+00 1028.00
IUUC-Mor-057135 Magnaporthe oryzae 42.09 4.00e-142 498.00
IUUC-Mpo-057475 Magnaporthe poae 41.47 5.00e-138 484.00
IUUC-Mtr-058689 Medicago truncatula 41.82 1.00e-133 469.00
IUUC-Mla-059149 Melampsora laricipopulina 44.76 3.00e-166 578.00
IUUC-Mga-059645 Meleagris gallopavo 62.30 3.00e-89 320.00
IUUC-Mvi-060485 Microbotryum violaceum 45.19 3.00e-144 506.00
IUUC-Mmr-061674 Microcebus murinus 90.60 0.00e+00 1091.00
IUUC-Mdo-062973 Monodelphis domestica 82.93 0.00e+00 1043.00
IUUC-Mmu-064180 Mus musculus 87.80 0.00e+00 1075.00
IUUC-Mac-064535 Musa acuminata 40.96 4.00e-95 342.00
IUUC-Mpu-066406 Mustela putorius furo 90.73 0.00e+00 1103.00
IUUC-Mlu-067795 Myotis lucifugus 92.68 0.00e+00 1077.00
IUUC-Nfi-068516 Neosartorya fischeri 44.39 2.00e-130 459.00
IUUC-Ncr-068767 Neurospora crassa 42.23 1.00e-135 476.00
IUUC-Opr-071084 Ochotona princeps 86.43 2.00e-138 484.00
IUUC-Ont-071614 Oreochromis niloticus 67.53 0.00e+00 906.00
IUUC-Oba-075980 Oryza barthii 43.16 1.00e-136 480.00
IUUC-Obr-076799 Oryza brachyantha 44.50 9.00e-148 516.00
IUUC-Ogl-077134 Oryza glaberrima 44.50 3.00e-144 505.00
IUUC-Ogu-078655 Oryza glumaepatula 42.88 2.00e-139 489.00
IUUC-Oin-079654 Oryza indica 44.50 3.00e-144 505.00
IUUC-Olo-080706 Oryza longistaminata 42.83 4.00e-137 481.00
IUUC-Ome-081716 Oryza meridionalis 39.84 2.00e-120 426.00
IUUC-Oni-082508 Oryza nivara 42.97 4.00e-136 478.00
IUUC-Opu-083707 Oryza punctata 42.83 4.00e-136 478.00
IUUC-Oru-084453 Oryza rufipogon 42.83 4.00e-137 481.00
IUUC-Osa-085811 Oryza sativa 44.50 2.00e-144 505.00
IUUC-Ola-087361 Oryzias latipes 69.19 0.00e+00 914.00
IUUC-Oga-088015 Otolemur garnettii 90.24 0.00e+00 1114.00
IUUC-Oar-090058 Ovis aries 91.67 2.00e-88 319.00
IUUC-Ptr-090631 Pan troglodytes 82.35 7.00e-140 489.00
IUUC-Pan-092306 Papio anubis 91.40 0.00e+00 1120.00
IUUC-Pma-094622 Petromyzon marinus 71.47 0.00e+00 951.00
IUUC-Pno-094794 Phaeosphaeria nodorum 39.02 4.00e-127 448.00
IUUC-Ppa-095528 Physcomitrella patens 41.98 1.00e-93 337.00
IUUC-Pfo-096682 Poecilia formosa 68.06 0.00e+00 915.00
IUUC-Pab-097939 Pongo abelii 90.94 0.00e+00 1012.00
IUUC-Pop-099043 Populus trichocarpa 46.15 1.00e-141 496.00
IUUC-Pca-100333 Procavia capensis 88.78 0.00e+00 1088.00
IUUC-Ppe-102078 Prunus persica 43.92 1.00e-147 516.00
IUUC-Pgr-103525 Puccinia graminis 46.12 1.00e-160 560.00
IUUC-Ptt-103929 Puccinia triticina 45.72 1.00e-156 547.00
IUUC-Pte-104029 Pyrenophora teres 43.29 2.00e-148 519.00
IUUC-Pyt-104446 Pyrenophora triticirepentis 42.97 1.00e-148 520.00
IUUC-Rno-105248 Rattus norvegicus 88.29 0.00e+00 1082.00
IUUC-Sce-106381 Saccharomyces cerevisiae 40.67 9.00e-153 533.00
IUUC-Sha-106519 Sarcophilus harrisii 83.95 0.00e+00 1051.00
IUUC-Sja-107908 Schizosaccharomyces japonicus 41.61 4.00e-141 495.00
IUUC-Spo-108071 Schizosaccharomyces pombe 41.86 4.00e-139 488.00
IUUC-Smo-109604 Selaginella moellendorffii 46.55 1.00e-156 546.00
IUUC-Sit-109742 Setaria italica 43.69 6.00e-152 530.00
IUUC-Sly-110970 Solanum lycopersicum 47.28 6.00e-83 301.00
IUUC-Stu-112593 Solanum tuberosum 45.87 4.00e-155 541.00
IUUC-Sar-113123 Sorex araneus 83.81 1.00e-139 488.00
IUUC-Sbi-113945 Sorghum bicolor 43.69 1.00e-149 523.00
IUUC-Sre-115188 Sporisorium reilianum 44.68 1.00e-156 546.00
IUUC-Tru-117685 Takifugu rubripes 68.87 0.00e+00 923.00
IUUC-Tni-119982 Tetraodon nigroviridis 69.31 0.00e+00 887.00
IUUC-Tca-121664 Theobroma cacao 46.76 8.00e-158 550.00
IUUC-Tre-122229 Trichoderma reesei 43.94 4.00e-137 481.00
IUUC-Tvi-122576 Trichoderma virens 43.57 9.00e-141 493.00
IUUC-Tae-124110 Triticum aestivum 45.11 7.00e-137 480.00
IUUC-Tur-126781 Triticum urartu 42.24 2.00e-120 426.00
IUUC-Tme-127080 Tuber melanosporum 47.03 6.00e-172 597.00
IUUC-Ttr-128514 Tursiops truncatus 90.57 0.00e+00 777.00
IUUC-Uma-129556 Ustilago maydis 43.09 1.00e-148 520.00
IUUC-Vda-129715 Verticillium dahliae 43.22 7.00e-148 517.00
IUUC-Vvi-131211 Vitis vinifera 45.39 6.00e-149 520.00
IUUC-Xma-133883 Xiphophorus maculatus 68.39 0.00e+00 890.00
IUUC-Yli-134438 Yarrowia lipolytica 42.07 1.00e-139 490.00
IUUC-Zma-135341 Zea mays 39.35 7.00e-136 477.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved