iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Oga-088563

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAQR03022585

Gene Name

WDR47

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOGAG00000013487.2	ENSOGAT00000013492.2	ENSOGAP00000012086.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-29	99.8	760	796
UBD/Beta-Prp	1.70e-58	198.2	664	922

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtcla.fsdtllvsGsdDgtikvWDlrtgvll 36
           gHt+ + +l  +s+++++sGs D+t++ WDlr   ++
   Q: 760  GHTGHILALYtWSGWMIASGSQDKTVRFWDLRVPSCV 796
           89999***966977*****************988887 PP

UBD/Beta-Prp

   S: 6    kghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgk....ilvtgse.Drtikvwdlstg 84
           ++hhk+ i+cv++sp ++llatgs d+ +kv  +  +++       ++s h+++++++ f +  +    il++++  D +i+  d + g
   Q: 664  NKHHKGSIYCVAWSPCGQLLATGSNDKYVKVLPFNAETCnatgpDLEFSMHDGTIRDLAFMEGPEsggaILISAGAgDCNIYTTDCQRG 752
           68*****************************99999999889888899************987667778777765516788888***** PP
   S: 85   kcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk 170
           + +h+l+gh+  +l+l     g  ++sGs+d+t+r wdl+  +c++    t+ g+ ++v +v+v+p+g+ll++G  D+ ++l+d++ g+
   Q: 753  QGLHALSGHTGHILALYTWS-GWMIASGSQDKTVRFWDLRVPSCVRVvgtTFHGTGSAVASVAVDPSGRLLATGQEDSSCMLYDIRGGR 840
           **************997777.9***********************99999*************************************** PP
   S: 171  llrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq....tgecvrtlnghtdnvksvrfspnderlvsgssDgsiriW 249
           +++     h ++v+s+ f++   +l++gs+d ++k+ dlq    ++  ++ + +h+d v + r + +d  ++s s+D+++ +W
   Q: 841  MVQSYHP-HSSDVRSVRFSPGAHYLLTGSYDMKIKVTDLQgdltKQLPIMVVGEHKDKVIQCRWHTQDLSFLSSSADRTVTLW 922
           *****98.********************************99977788*********************************** PP

Organism

Otolemur garnettii

Protein Sequence
(Fasta)

MTAEETVNVK EVEIIKLILD FLNSKKLHIS MLALEKESGV INGLFSDDML FLRQLILDGQ 60
WDEVLQFIQP LECMEKFDKK RFRYIILKQK FLEALCVNNA MSAEDEPQHV RFLFLKLEFT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAGGCTATC AATATGACGG CTGAAGAAAC AGTGAATGTA AAAGAGGTTG AAATCATTAA 60
GCTGATTTTG GACTTCCTGA ATTCAAAGAA GCTTCATATT AGTATGCTGG CCCTTGAGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR006595--CTLH_C
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001519	Ailuropoda melanoleuca	98.06	0.00e+00	1680.00
IUUC-Apl-003954	Anas platyrhynchos	91.07	0.00e+00	1573.00
IUUC-Aca-004766	Anolis carolinensis	88.58	0.00e+00	1498.00
IUUC-Ame-010725	Astyanax mexicanus	69.90	0.00e+00	1128.00
IUUC-Bta-013072	Bos taurus	94.44	0.00e+00	1609.00
IUUC-Cel-018667	Caenorhabditis elegans	48.33	3.00e-94	339.00
IUUC-Cja-018835	Callithrix jacchus	97.52	0.00e+00	1671.00
IUUC-Cfa-020380	Canis familiaris	95.60	0.00e+00	1015.00
IUUC-Cpo-021883	Cavia porcellus	95.69	0.00e+00	1594.00
IUUC-Csa-023467	Chlorocebus sabaeus	96.98	0.00e+00	1649.00
IUUC-Cho-024342	Choloepus hoffmanni	87.14	0.00e+00	1485.00
IUUC-Cin-025112	Ciona intestinalis	43.08	8.00e-73	266.00
IUUC-Dre-027530	Danio rerio	75.94	0.00e+00	1261.00
IUUC-Dno-029290	Dasypus novemcinctus	96.66	0.00e+00	1636.00
IUUC-Dor-030258	Dipodomys ordii	82.11	0.00e+00	1357.00
IUUC-Dme-032040	Drosophila melanogaster	52.73	3.00e-103	368.00
IUUC-Ete-032248	Echinops telfairi	87.50	0.00e+00	779.00
IUUC-Eca-033623	Equus caballus	96.98	0.00e+00	1647.00
IUUC-Fca-036425	Felis catus	95.43	0.00e+00	1460.00
IUUC-Fal-036661	Ficedula albicollis	90.41	0.00e+00	1539.00
IUUC-Gmo-039527	Gadus morhua	73.30	0.00e+00	1226.00
IUUC-Gga-041177	Gallus gallus	90.40	0.00e+00	1534.00
IUUC-Gac-042049	Gasterosteus aculeatus	73.06	0.00e+00	1239.00
IUUC-Ggo-044833	Gorilla gorilla	97.73	0.00e+00	1675.00
IUUC-Hsa-046084	Homo sapiens	97.84	0.00e+00	1677.00
IUUC-Lch-050313	Latimeria chalumnae	80.81	0.00e+00	1403.00
IUUC-Loc-051790	Lepisosteus oculatus	81.26	0.00e+00	1410.00
IUUC-Laf-053521	Loxodonta africana	95.47	0.00e+00	1612.00
IUUC-Mcc-055053	Macaca mulatta	96.98	0.00e+00	1650.00
IUUC-Meu-056734	Macropus eugenii	92.44	0.00e+00	690.00
IUUC-Mga-059381	Meleagris gallopavo	90.62	0.00e+00	1554.00
IUUC-Mmr-060859	Microcebus murinus	98.06	0.00e+00	1674.00
IUUC-Mdo-062501	Monodelphis domestica	91.82	0.00e+00	1486.00
IUUC-Mmu-063126	Mus musculus	94.39	0.00e+00	1594.00
IUUC-Mpu-066718	Mustela putorius furo	96.60	0.00e+00	1300.00
IUUC-Mlu-067246	Myotis lucifugus	95.69	0.00e+00	1626.00
IUUC-Nle-069807	Nomascus leucogenys	97.95	0.00e+00	1678.00
IUUC-Opr-070862	Ochotona princeps	83.42	7.00e-67	248.00
IUUC-Ont-072519	Oreochromis niloticus	75.91	0.00e+00	1265.00
IUUC-Oan-072740	Ornithorhynchus anatinus	90.29	0.00e+00	801.00
IUUC-Ocu-074898	Oryctolagus cuniculus	97.09	0.00e+00	1617.00
IUUC-Ola-086396	Oryzias latipes	75.74	0.00e+00	1295.00
IUUC-Oar-089926	Ovis aries	96.33	0.00e+00	1639.00
IUUC-Ptr-090706	Pan troglodytes	97.73	0.00e+00	1675.00
IUUC-Pan-091740	Papio anubis	97.09	0.00e+00	1651.00
IUUC-Psi-093938	Pelodiscus sinensis	90.14	0.00e+00	1560.00
IUUC-Pfo-096531	Poecilia formosa	76.20	0.00e+00	1262.00
IUUC-Pab-098312	Pongo abelii	96.76	0.00e+00	1649.00
IUUC-Pca-101100	Procavia capensis	89.82	0.00e+00	721.00
IUUC-Pva-102734	Pteropus vampyrus	86.43	0.00e+00	1201.00
IUUC-Rno-105625	Rattus norvegicus	93.86	0.00e+00	1561.00
IUUC-Sha-106999	Sarcophilus harrisii	90.20	0.00e+00	1507.00
IUUC-Sar-112988	Sorex araneus	83.91	0.00e+00	1175.00
IUUC-Ssc-115384	Sus scrofa	95.80	0.00e+00	1594.00
IUUC-Tgu-116808	Taeniopygia guttata	90.31	0.00e+00	1533.00
IUUC-Tru-118233	Takifugu rubripes	74.73	0.00e+00	1226.00
IUUC-Tsy-119509	Tarsius syrichta	97.40	0.00e+00	674.00
IUUC-Tni-120473	Tetraodon nigroviridis	74.15	0.00e+00	1254.00
IUUC-Tbe-127447	Tupaia belangeri	89.12	1.00e-144	506.00
IUUC-Ttr-128459	Tursiops truncatus	92.46	0.00e+00	1502.00
IUUC-Vpa-130258	Vicugna pacos	89.54	0.00e+00	999.00
IUUC-Xtr-132609	Xenopus tropicalis	78.44	0.00e+00	1325.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence