iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-036871

Ensembl Protein ID

ENSFALP00000005614.1

UniProt Accession

U3JS60; U3JS60_FICAL

Genbank Protein ID

ENSFALP00000005614

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01010475

Gene Name

LRBA

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000005390.1	ENSFALT00000005641.1	ENSFALP00000005614.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-07	30.7	2794	2822

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWD 29
            d+++++++  d  +l++G+d+g+++vW 
   Q: 2794 DDKIRAMQLsRDgQYLLTGGDNGVVMVWQ 2822
           688999***9788*************986 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MASEGKQVVQ PTGDDGGGGA GREGNAAEGG SVLQPLNPGV PIRGIKMKFA VLTGLVEVGE 60
VSNRDIVDTV FNLLVGGQFD LEMNFIIQEG EGITCMVDLL DKCDTTCQAE VWSMFTAILK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGAAAGCA GATTAAAGCG GTGAGGTGGG TCCGGGAGCA CTTCCGCGGG GAGAGGCGTG 60
AGCGGTCCCG CCGGGCGCGG GGCAGGGGCC GGGATTGCGG GCTGTGGGCA GCGCATGAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR010508--DUF1088
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF06469--DUF1088
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0016020--C:membrane

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000339	Aegilops tauschii	39.71	8.00e-149	521.00
IUUC-Atr-002998	Amborella trichopoda	36.84	6.00e-145	509.00
IUUC-Apl-003632	Anas platyrhynchos	87.78	0.00e+00	915.00
IUUC-Aca-005124	Anolis carolinensis	80.96	0.00e+00	4629.00
IUUC-Aly-005407	Arabidopsis lyrata	39.20	4.00e-148	519.00
IUUC-Ath-007674	Arabidopsis thaliana	38.69	3.00e-146	514.00
IUUC-Ame-011487	Astyanax mexicanus	68.69	8.00e-176	609.00
IUUC-Bta-012509	Bos taurus	76.83	0.00e+00	4280.00
IUUC-Bdi-015051	Brachypodium distachyon	34.13	2.00e-146	513.00
IUUC-Bol-015261	Brassica oleracea	38.58	4.00e-141	497.00
IUUC-Bra-016877	Brassica rapa	38.29	5.00e-141	496.00
IUUC-Cja-018744	Callithrix jacchus	91.25	0.00e+00	1466.00
IUUC-Cfa-020786	Canis familiaris	79.67	0.00e+00	4499.00
IUUC-Cpo-021636	Cavia porcellus	79.92	0.00e+00	2692.00
IUUC-Ete-032481	Echinops telfairi	86.80	0.00e+00	1278.00
IUUC-Eca-033893	Equus caballus	78.56	0.00e+00	4466.00
IUUC-Fca-035726	Felis catus	90.60	0.00e+00	973.00
IUUC-Gga-041206	Gallus gallus	90.46	0.00e+00	5235.00
IUUC-Gma-042772	Glycine max	39.71	2.00e-150	528.00
IUUC-Hsa-045763	Homo sapiens	68.87	0.00e+00	757.00
IUUC-Hvu-047134	Hordeum vulgare	39.12	7.00e-150	525.00
IUUC-Itr-048852	Ictidomys tridecemlineatus	79.30	0.00e+00	4506.00
IUUC-Lch-050027	Latimeria chalumnae	84.85	0.00e+00	1385.00
IUUC-Lpe-050958	Leersia perrieri	39.14	5.00e-147	516.00
IUUC-Loc-052771	Lepisosteus oculatus	65.22	0.00e+00	2248.00
IUUC-Laf-053724	Loxodonta africana	78.29	0.00e+00	4497.00
IUUC-Mcc-055200	Macaca mulatta	90.72	0.00e+00	1459.00
IUUC-Mtr-058372	Medicago truncatula	39.36	4.00e-144	507.00
IUUC-Mga-059851	Meleagris gallopavo	95.48	0.00e+00	1803.00
IUUC-Mmr-061112	Microcebus murinus	78.42	0.00e+00	4525.00
IUUC-Mdo-062727	Monodelphis domestica	78.38	0.00e+00	3932.00
IUUC-Mmu-064194	Mus musculus	90.92	0.00e+00	1461.00
IUUC-Mac-064991	Musa acuminata	35.45	1.00e-150	528.00
IUUC-Mpu-066074	Mustela putorius furo	79.67	0.00e+00	4504.00
IUUC-Mlu-067308	Myotis lucifugus	76.72	0.00e+00	4331.00
IUUC-Oan-073413	Ornithorhynchus anatinus	92.81	0.00e+00	1488.00
IUUC-Ocu-074483	Oryctolagus cuniculus	83.28	0.00e+00	2168.00
IUUC-Oba-075426	Oryza barthii	40.89	3.00e-147	517.00
IUUC-Obr-076907	Oryza brachyantha	40.27	3.00e-147	517.00
IUUC-Ogl-077620	Oryza glaberrima	35.90	4.00e-142	499.00
IUUC-Ogu-078751	Oryza glumaepatula	41.16	6.00e-149	522.00
IUUC-Oin-079673	Oryza indica	38.85	2.00e-142	501.00
IUUC-Olo-080417	Oryza longistaminata	38.85	4.00e-142	500.00
IUUC-Ome-081931	Oryza meridionalis	40.27	1.00e-147	518.00
IUUC-Oni-082349	Oryza nivara	40.89	3.00e-147	516.00
IUUC-Oru-085197	Oryza rufipogon	40.76	5.00e-147	516.00
IUUC-Ola-087242	Oryzias latipes	72.59	0.00e+00	2088.00
IUUC-Oga-088409	Otolemur garnettii	84.36	0.00e+00	2564.00
IUUC-Oar-089217	Ovis aries	79.13	0.00e+00	4474.00
IUUC-Pop-099604	Populus trichocarpa	38.35	5.00e-143	503.00
IUUC-Pca-100240	Procavia capensis	83.71	0.00e+00	1508.00
IUUC-Ppe-101836	Prunus persica	37.85	6.00e-149	522.00
IUUC-Rno-104971	Rattus norvegicus	90.58	0.00e+00	1541.00
IUUC-Sha-107387	Sarcophilus harrisii	79.99	0.00e+00	4586.00
IUUC-Sit-110075	Setaria italica	33.82	4.00e-148	520.00
IUUC-Sly-111033	Solanum lycopersicum	38.72	6.00e-143	502.00
IUUC-Tgu-117304	Taeniopygia guttata	94.52	0.00e+00	5068.00
IUUC-Tru-118226	Takifugu rubripes	72.66	0.00e+00	1193.00
IUUC-Tni-120595	Tetraodon nigroviridis	64.76	0.00e+00	1014.00
IUUC-Tca-121572	Theobroma cacao	33.24	7.00e-152	533.00
IUUC-Tae-123372	Triticum aestivum	39.84	5.00e-129	454.00
IUUC-Tur-126212	Triticum urartu	39.44	2.00e-145	511.00
IUUC-Ttr-128452	Tursiops truncatus	71.23	0.00e+00	2599.00
IUUC-Vvi-130860	Vitis vinifera	39.79	2.00e-146	514.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence