iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000021330.6	ENSRNOT00000038257.5	ENSRNOP00000033080.4
ENSRNOG00000021330.6	ENSRNOT00000083572.1	ENSRNOP00000075544.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	1.30e-06	28.9	418	441

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 1    llvCPvCqkmvdqtdfeeHlDeCl 24
           l+ CPvCq  v +++++eHlD+Cl
   Q: 418  LVNCPVCQGVVLESQINEHLDRCL 441
           589********************8 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MDEDLVVALR LQEEWDVQAA RRAAAREPLS LVDASWELVD PTPDLQALFL QFNDRFFWGQ 60
LEAVEVKWSV RMTLCAGICT YEGRGGMCSI RLSEPLLKLR PRKDLVEVYH TFHDEVDEYR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATCGGGAT GGACGAGGAT CTGGTGGTCG CGCTGCGGCT GCAGGAGGAG TGGGACGTGC 60
AGGCGGCGCG GCGCGCGGCG GCGCGGGAGC CCCTATCGTT GGTGGACGCG TCCTGGGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006640--SprT-like_domain
IPR006642--Znf_Rad18_put

Pfam

PF10263--SprT-like

SMART

SM00731--SprT
SM00734--ZnF_Rad18

Gene Ontology

GO:0016607--C:nuclear speck
GO:0003677--F:DNA binding
GO:0031398--P:positive regulation of protein ubiquitination
GO:0009411--P:response to UV
GO:0019985--P:translesion synthesis

KEGG

rno:292101

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001028	Aegilops tauschii	32.35	2.00e-04	40.80
IUUC-Aml-001352	Ailuropoda melanoleuca	61.24	4.00e-157	547.00
IUUC-Atr-002445	Amborella trichopoda	34.13	8.00e-26	111.00
IUUC-Apl-003724	Anas platyrhynchos	37.57	5.00e-44	171.00
IUUC-Aca-005382	Anolis carolinensis	44.44	4.00e-106	378.00
IUUC-Ame-011053	Astyanax mexicanus	41.18	1.00e-73	270.00
IUUC-Bta-012578	Bos taurus	60.64	1.00e-154	539.00
IUUC-Cel-018317	Caenorhabditis elegans	47.37	7.00e-55	207.00
IUUC-Cja-019824	Callithrix jacchus	60.61	2.00e-155	542.00
IUUC-Cfa-020307	Canis familiaris	63.65	7.00e-166	576.00
IUUC-Cpo-022142	Cavia porcellus	58.94	8.00e-138	483.00
IUUC-Cre-022820	Chlamydomonas reinhardtii	51.32	2.00e-14	73.90
IUUC-Csa-024002	Chlorocebus sabaeus	62.05	5.00e-154	537.00
IUUC-Cho-024371	Choloepus hoffmanni	59.66	5.00e-106	377.00
IUUC-Cin-025503	Ciona intestinalis	45.38	7.00e-61	227.00
IUUC-Csv-025903	Ciona savignyi	53.44	3.00e-60	224.00
IUUC-Dre-027871	Danio rerio	41.03	9.00e-82	297.00
IUUC-Dno-029800	Dasypus novemcinctus	55.71	2.00e-145	508.00
IUUC-Dor-030856	Dipodomys ordii	48.81	5.00e-96	344.00
IUUC-Dme-031958	Drosophila melanogaster	41.35	2.00e-47	184.00
IUUC-Ete-032321	Echinops telfairi	65.69	2.00e-90	326.00
IUUC-Eca-033610	Equus caballus	62.53	2.00e-163	568.00
IUUC-Eeu-034608	Erinaceus europaeus	51.09	2.00e-121	429.00
IUUC-Fca-035456	Felis catus	60.56	2.00e-158	552.00
IUUC-Fal-036725	Ficedula albicollis	37.67	7.00e-65	241.00
IUUC-Gmo-039428	Gadus morhua	48.12	8.00e-64	237.00
IUUC-Gga-041138	Gallus gallus	43.97	2.00e-96	346.00
IUUC-Gac-041946	Gasterosteus aculeatus	57.69	2.00e-63	236.00
IUUC-Ggo-044909	Gorilla gorilla	62.10	4.00e-156	544.00
IUUC-Hsa-046804	Homo sapiens	62.10	1.00e-154	539.00
IUUC-Hvu-047629	Hordeum vulgare	30.49	7.00e-05	42.00
IUUC-Itr-048136	Ictidomys tridecemlineatus	63.77	2.00e-145	509.00
IUUC-Lch-050399	Latimeria chalumnae	39.45	9.00e-81	294.00
IUUC-Lpe-050694	Leersia perrieri	29.41	2.00e-05	44.70
IUUC-Loc-052526	Lepisosteus oculatus	46.02	2.00e-76	280.00
IUUC-Lma-053205	Leptosphaeria maculans	35.92	3.00e-32	132.00
IUUC-Laf-054101	Loxodonta africana	62.55	5.00e-173	600.00
IUUC-Mcc-055889	Macaca mulatta	62.25	2.00e-154	538.00
IUUC-Meu-056236	Macropus eugenii	64.86	8.00e-24	104.00
IUUC-Mga-059774	Meleagris gallopavo	39.37	4.00e-77	281.00
IUUC-Mmr-061635	Microcebus murinus	59.92	8.00e-153	533.00
IUUC-Mdo-062699	Monodelphis domestica	44.65	3.00e-87	315.00
IUUC-Mmu-063270	Mus musculus	82.53	0.00e+00	742.00
IUUC-Mac-065121	Musa acuminata	24.07	7.60e-02	31.20
IUUC-Mpu-065833	Mustela putorius furo	62.05	3.00e-165	575.00
IUUC-Mlu-067479	Myotis lucifugus	50.00	1.00e-93	336.00
IUUC-Nle-069224	Nomascus leucogenys	62.90	2.00e-161	562.00
IUUC-Opr-070699	Ochotona princeps	55.14	3.00e-93	335.00
IUUC-Ont-072423	Oreochromis niloticus	45.57	3.00e-78	286.00
IUUC-Oan-073554	Ornithorhynchus anatinus	67.95	7.00e-35	137.00
IUUC-Ocu-074946	Oryctolagus cuniculus	70.68	8.00e-101	359.00
IUUC-Oba-075090	Oryza barthii	30.61	1.00e-04	42.00
IUUC-Obr-076066	Oryza brachyantha	30.00	2.00e-04	41.20
IUUC-Ogl-077154	Oryza glaberrima	30.61	1.00e-04	42.00
IUUC-Ogu-077955	Oryza glumaepatula	30.61	1.00e-04	41.60
IUUC-Oin-079055	Oryza indica	30.61	1.00e-04	42.00
IUUC-Olo-080733	Oryza longistaminata	29.50	3.00e-05	43.50
IUUC-Ome-081338	Oryza meridionalis	30.61	1.00e-04	42.00
IUUC-Oni-082257	Oryza nivara	30.61	1.00e-04	42.00
IUUC-Opu-083290	Oryza punctata	24.38	1.00e-03	38.50
IUUC-Oru-084633	Oryza rufipogon	31.63	1.00e-04	41.60
IUUC-Osa-086222	Oryza sativa	30.61	1.00e-04	41.60
IUUC-Ola-087333	Oryzias latipes	39.18	7.00e-83	301.00
IUUC-Oga-088956	Otolemur garnettii	63.77	1.00e-164	573.00
IUUC-Oar-090014	Ovis aries	60.84	9.00e-154	536.00
IUUC-Ptr-091565	Pan troglodytes	62.10	1.00e-154	539.00
IUUC-Pan-092756	Papio anubis	62.65	6.00e-156	543.00
IUUC-Psi-093051	Pelodiscus sinensis	39.66	7.00e-71	260.00
IUUC-Pma-094409	Petromyzon marinus	73.75	6.00e-35	139.00
IUUC-Pno-094926	Phaeosphaeria nodorum	36.41	5.00e-32	131.00
IUUC-Pfo-096555	Poecilia formosa	43.94	5.00e-74	271.00
IUUC-Pab-098754	Pongo abelii	60.92	3.00e-100	358.00
IUUC-Pca-100166	Procavia capensis	57.06	8.00e-155	540.00
IUUC-Pva-102910	Pteropus vampyrus	53.71	4.00e-132	464.00
IUUC-Pte-104222	Pyrenophora teres	36.89	2.00e-32	133.00
IUUC-Pyt-104688	Pyrenophora triticirepentis	37.07	5.00e-32	131.00
IUUC-Sha-106669	Sarcophilus harrisii	44.80	2.00e-88	318.00
IUUC-Smo-108867	Selaginella moellendorffii	36.23	2.00e-25	109.00
IUUC-Sit-110221	Setaria italica	30.30	9.00e-03	35.00
IUUC-Sar-113141	Sorex araneus	55.59	2.00e-96	346.00
IUUC-Sbi-114252	Sorghum bicolor	32.31	9.00e-03	35.00
IUUC-Ssc-115883	Sus scrofa	61.62	2.00e-159	555.00
IUUC-Tgu-116997	Taeniopygia guttata	39.13	4.00e-80	291.00
IUUC-Tru-117785	Takifugu rubripes	38.42	2.00e-78	286.00
IUUC-Tsy-119449	Tarsius syrichta	56.53	7.00e-107	380.00
IUUC-Tni-120379	Tetraodon nigroviridis	41.14	4.00e-86	311.00
IUUC-Tae-124356	Triticum aestivum	34.72	7.00e-06	46.20
IUUC-Tur-126257	Triticum urartu	30.49	2.00e-04	40.80
IUUC-Tbe-128156	Tupaia belangeri	56.88	1.00e-137	483.00
IUUC-Ttr-128748	Tursiops truncatus	59.67	2.00e-117	415.00
IUUC-Vpa-130454	Vicugna pacos	61.14	6.00e-74	271.00
IUUC-Xtr-132163	Xenopus tropicalis	39.08	2.00e-83	302.00
IUUC-Xma-134184	Xiphophorus maculatus	43.45	6.00e-79	288.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence