iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	98.51	1.00e-98	355.00	IUUC-Hsa-045876
E3 activity/RING/RING	44.95	3.00e-21	96.30	IUUC-Sce-106405

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sus scrofa

Protein Sequence
(Fasta)

CESCVDLLFV RGAGNCPECG TPLRKSNFRV QLFEDPTVDK EVEIRKKVLK IYNKREEDFP 60
SLREYNDFLE EVEEIVFNLT NNVDLDNTKK KMEIYQKENK DVIQKNKLKL TREQEELEEA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTGAAAGTT GTGTGGATTT GCTTTTTGTG AGAGGAGCTG GAAACTGTCC TGAGTGTGGC 60
ACTCCACTTA GAAAGAGCAA CTTCAGGGTA CAACTCTTTG AAGATCCTAC TGTTGACAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015877--Cdk-activating_kinase_MAT1_cen
IPR004575--MAT1/Tfb3
IPR003903--UIM_dom
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50330--UIM

Pfam

PF06391--MAT1

Gene Ontology

GO:0005675--C:holo TFIIH complex
GO:0061575--F:cyclin-dependent protein serine/threonine kinase activator activity
GO:0007049--P:cell cycle
GO:0006281--P:DNA repair
GO:0000079--P:regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0006357--P:regulation of transcription from RNA polymerase II promoter

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000821	Aegilops tauschii	33.33	8.00e-08	50.10
IUUC-Aml-002414	Ailuropoda melanoleuca	98.02	2.00e-99	354.00
IUUC-Atr-002627	Amborella trichopoda	56.25	7.00e-18	83.20
IUUC-Apl-003312	Anas platyrhynchos	88.61	8.00e-80	289.00
IUUC-Aca-004731	Anolis carolinensis	86.14	7.00e-86	310.00
IUUC-Aly-006244	Arabidopsis lyrata	43.66	1.00e-15	75.90
IUUC-Ath-007136	Arabidopsis thaliana	43.66	9.00e-16	75.90
IUUC-Ago-007788	Ashbya gossypii	43.12	3.00e-20	92.00
IUUC-Acl-008179	Aspergillus clavatus	42.76	1.00e-24	107.00
IUUC-Afl-008465	Aspergillus flavus	46.79	1.00e-24	107.00
IUUC-Afu-009056	Aspergillus fumigatus	46.79	9.00e-25	107.00
IUUC-Ani-009235	Aspergillus nidulans	41.82	4.00e-08	51.60
IUUC-Ang-009677	Aspergillus niger	46.79	3.00e-24	105.00
IUUC-Aor-010017	Aspergillus oryzae	46.79	1.00e-24	106.00
IUUC-Ate-010259	Aspergillus terreus	46.79	3.00e-24	105.00
IUUC-Ame-010934	Astyanax mexicanus	65.35	3.00e-57	215.00
IUUC-Bgr-012074	Blumeria graminis	30.30	3.00e-17	82.40
IUUC-Bta-013329	Bos taurus	98.02	3.00e-99	354.00
IUUC-Bci-013704	Botrytis cinerea	36.94	9.00e-19	87.40
IUUC-Bdi-014606	Brachypodium distachyon	41.43	1.00e-13	68.90
IUUC-Bra-016949	Brassica rapa	46.48	4.00e-16	77.00
IUUC-Cel-018428	Caenorhabditis elegans	40.91	3.00e-23	102.00
IUUC-Cja-019720	Callithrix jacchus	98.02	3.00e-99	354.00
IUUC-Cfa-020319	Canis familiaris	98.02	2.00e-99	354.00
IUUC-Cpo-021652	Cavia porcellus	95.54	4.00e-96	343.00
IUUC-Cre-022749	Chlamydomonas reinhardtii	40.91	3.00e-12	64.70
IUUC-Csa-023560	Chlorocebus sabaeus	98.51	4.00e-100	357.00
IUUC-Cho-025042	Choloepus hoffmanni	74.50	3.00e-42	164.00
IUUC-Cin-025502	Ciona intestinalis	45.09	5.00e-35	141.00
IUUC-Csv-026302	Ciona savignyi	41.62	2.00e-33	135.00
IUUC-Cgl-026541	Colletotrichum gloeosporioides	24.53	1.70e-02	32.30
IUUC-Cne-027055	Cryptococcus neoformans	47.71	7.00e-27	114.00
IUUC-Cme-027128	Cyanidioschyzon merolae	44.07	2.00e-11	62.80
IUUC-Dre-027714	Danio rerio	72.28	2.00e-64	239.00
IUUC-Dno-029232	Dasypus novemcinctus	99.36	9.00e-73	265.00
IUUC-Dor-030996	Dipodomys ordii	78.39	3.00e-69	254.00
IUUC-Dse-031359	Dothistroma septosporum	50.00	2.00e-27	116.00
IUUC-Dme-031992	Drosophila melanogaster	49.25	6.00e-45	174.00
IUUC-Ete-032973	Echinops telfairi	66.22	7.00e-46	177.00
IUUC-Eca-034116	Equus caballus	98.51	5.00e-100	357.00
IUUC-Eeu-035143	Erinaceus europaeus	82.67	3.00e-76	278.00
IUUC-Fca-035960	Felis catus	98.02	2.00e-99	355.00
IUUC-Fal-037039	Ficedula albicollis	88.61	1.00e-90	325.00
IUUC-Fox-037882	Fusarium oxysporum	34.23	9.00e-15	73.90
IUUC-Fso-038318	Fusarium solani	29.70	6.00e-16	77.80
IUUC-Gmo-038905	Gadus morhua	67.82	8.00e-61	226.00
IUUC-Ggr-039857	Gaeumannomyces graminis	33.64	3.00e-08	52.80
IUUC-Gga-041216	Gallus gallus	87.62	8.00e-72	263.00
IUUC-Gac-041987	Gasterosteus aculeatus	71.14	7.00e-66	243.00
IUUC-Gma-044312	Glycine max	51.47	1.00e-17	82.40
IUUC-Ggo-044930	Gorilla gorilla	85.64	3.00e-80	290.00
IUUC-Hsa-045876	Homo sapiens	98.51	4.00e-100	357.00
IUUC-Hvu-047088	Hordeum vulgare	40.00	4.00e-13	67.40
IUUC-Itr-048476	Ictidomys tridecemlineatus	97.99	2.00e-97	347.00
IUUC-Kpa-049202	Komagataella pastoris	36.05	2.00e-18	85.90
IUUC-Lch-049886	Latimeria chalumnae	81.00	4.00e-74	270.00
IUUC-Lpe-051199	Leersia perrieri	44.29	1.00e-14	72.80
IUUC-Loc-052556	Lepisosteus oculatus	73.13	6.00e-53	200.00
IUUC-Lma-053002	Leptosphaeria maculans	42.59	2.00e-21	96.30
IUUC-Laf-054516	Loxodonta africana	97.52	4.00e-98	350.00
IUUC-Mcc-054761	Macaca mulatta	98.51	1.00e-99	355.00
IUUC-Mor-057048	Magnaporthe oryzae	36.45	2.00e-16	79.30
IUUC-Mpo-057598	Magnaporthe poae	37.04	1.00e-06	45.80
IUUC-Mtr-058131	Medicago truncatula	50.75	2.00e-16	78.20
IUUC-Mla-059009	Melampsora laricipopulina	53.57	2.00e-29	120.00
IUUC-Mga-060199	Meleagris gallopavo	87.94	3.00e-70	257.00
IUUC-Mvi-060382	Microbotryum violaceum	42.45	5.00e-23	101.00
IUUC-Mmr-061671	Microcebus murinus	98.73	5.00e-73	266.00
IUUC-Mdo-062228	Monodelphis domestica	95.05	6.00e-96	343.00
IUUC-Mmu-064416	Mus musculus	96.00	3.00e-96	344.00
IUUC-Mac-064807	Musa acuminata	48.44	3.00e-14	71.20
IUUC-Mpu-066455	Mustela putorius furo	98.51	2.00e-100	358.00
IUUC-Mlu-067325	Myotis lucifugus	97.03	1.00e-97	348.00
IUUC-Nfi-068566	Neosartorya fischeri	46.79	9.00e-25	107.00
IUUC-Ncr-068687	Neurospora crassa	39.53	1.00e-15	76.60
IUUC-Nle-069937	Nomascus leucogenys	98.51	4.00e-100	357.00
IUUC-Opr-070321	Ochotona princeps	72.86	4.00e-64	237.00
IUUC-Ont-072636	Oreochromis niloticus	73.63	1.00e-64	239.00
IUUC-Oan-072915	Ornithorhynchus anatinus	86.14	2.00e-86	311.00
IUUC-Ocu-074547	Oryctolagus cuniculus	98.02	5.00e-92	330.00
IUUC-Oba-075269	Oryza barthii	44.29	2.00e-14	71.60
IUUC-Obr-076081	Oryza brachyantha	42.86	1.00e-14	72.40
IUUC-Ogl-077011	Oryza glaberrima	44.29	2.00e-14	71.60
IUUC-Ogu-078667	Oryza glumaepatula	44.29	2.00e-14	72.00
IUUC-Oin-079153	Oryza indica	44.29	2.00e-14	71.60
IUUC-Olo-080344	Oryza longistaminata	44.83	4.00e-11	60.80
IUUC-Ome-081805	Oryza meridionalis	41.43	1.00e-13	70.10
IUUC-Oni-082783	Oryza nivara	41.43	2.00e-13	68.60
IUUC-Opu-083247	Oryza punctata	42.86	3.00e-14	71.20
IUUC-Oru-085262	Oryza rufipogon	44.29	2.00e-14	71.60
IUUC-Osa-086250	Oryza sativa	44.29	1.00e-14	72.40
IUUC-Ola-086780	Oryzias latipes	71.64	3.00e-66	244.00
IUUC-Olu-087653	Ostreococcus lucimarinus	39.39	6.00e-12	63.20
IUUC-Oga-088012	Otolemur garnettii	99.36	4.00e-73	267.00
IUUC-Oar-090274	Ovis aries	85.64	9.00e-79	286.00
IUUC-Ptr-090780	Pan troglodytes	98.51	4.00e-100	357.00
IUUC-Pan-091815	Papio anubis	86.50	4.00e-82	296.00
IUUC-Psi-093883	Pelodiscus sinensis	89.50	3.00e-86	311.00
IUUC-Pma-094717	Petromyzon marinus	58.12	1.00e-27	116.00
IUUC-Pno-094958	Phaeosphaeria nodorum	44.14	7.00e-24	104.00
IUUC-Ppa-095445	Physcomitrella patens	56.67	3.00e-16	78.20
IUUC-Pfo-096051	Poecilia formosa	70.79	3.00e-62	231.00
IUUC-Pab-097609	Pongo abelii	98.02	4.00e-99	353.00
IUUC-Pop-099460	Populus trichocarpa	52.11	9.00e-19	86.30
IUUC-Pca-101094	Procavia capensis	97.03	4.00e-99	353.00
IUUC-Ppe-101481	Prunus persica	51.47	4.00e-17	80.50
IUUC-Pva-103219	Pteropus vampyrus	98.02	1.00e-88	319.00
IUUC-Pgr-103557	Puccinia graminis	49.11	3.00e-27	115.00
IUUC-Ptt-103719	Puccinia triticina	49.11	1.00e-27	117.00
IUUC-Pte-104301	Pyrenophora teres	44.86	2.00e-20	92.40
IUUC-Pyt-104486	Pyrenophora triticirepentis	47.87	1.00e-20	93.60
IUUC-Rno-105846	Rattus norvegicus	97.00	4.00e-97	347.00
IUUC-Sce-106405	Saccharomyces cerevisiae	44.95	2.00e-21	96.30
IUUC-Sha-107594	Sarcophilus harrisii	95.60	1.00e-70	258.00
IUUC-Sja-107951	Schizosaccharomyces japonicus	36.42	6.00e-22	97.80
IUUC-Spo-108137	Schizosaccharomyces pombe	46.60	2.00e-24	105.00
IUUC-Ssl-108503	Sclerotinia sclerotiorum	30.51	5.00e-21	94.70
IUUC-Smo-109621	Selaginella moellendorffii	43.06	3.00e-16	77.80
IUUC-Sit-110672	Setaria italica	47.14	2.00e-15	75.10
IUUC-Sly-111744	Solanum lycopersicum	57.81	1.00e-18	85.50
IUUC-Stu-112343	Solanum tuberosum	53.73	7.00e-18	83.20
IUUC-Sar-113298	Sorex araneus	96.98	1.00e-94	338.00
IUUC-Sbi-113918	Sorghum bicolor	42.86	2.00e-14	71.60
IUUC-Sre-114991	Sporisorium reilianum	46.23	5.00e-22	98.20
IUUC-Tgu-116452	Taeniopygia guttata	89.50	2.00e-84	305.00
IUUC-Tru-118621	Takifugu rubripes	70.85	5.00e-63	234.00
IUUC-Tsy-119500	Tarsius syrichta	98.73	9.00e-73	266.00
IUUC-Tni-120454	Tetraodon nigroviridis	66.99	1.00e-60	226.00
IUUC-Tca-121192	Theobroma cacao	46.48	1.00e-16	79.30
IUUC-Tre-122011	Trichoderma reesei	34.00	9.00e-17	80.90
IUUC-Tvi-122317	Trichoderma virens	35.53	2.00e-17	83.20
IUUC-Tae-123854	Triticum aestivum	41.43	4.00e-14	70.50
IUUC-Tur-126556	Triticum urartu	41.43	9.00e-14	69.70
IUUC-Tme-127135	Tuber melanosporum	51.85	2.00e-21	96.30
IUUC-Tbe-127287	Tupaia belangeri	96.04	9.00e-95	339.00
IUUC-Ttr-128864	Tursiops truncatus	98.51	2.00e-99	354.00
IUUC-Uma-129539	Ustilago maydis	50.53	2.00e-24	106.00
IUUC-Vda-129713	Verticillium dahliae	44.05	5.00e-12	65.10
IUUC-Vpa-130462	Vicugna pacos	98.51	3.00e-100	357.00
IUUC-Vvi-130988	Vitis vinifera	50.00	2.00e-16	78.60
IUUC-Xtr-131830	Xenopus tropicalis	79.29	2.00e-82	297.00
IUUC-Xma-133952	Xiphophorus maculatus	70.30	9.00e-63	233.00
IUUC-Yli-134433	Yarrowia lipolytica	44.74	6.00e-23	101.00
IUUC-Zma-134867	Zea mays	41.43	4.00e-14	70.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence