iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000005515.1	ENSORLT00000006944.1	ENSORLP00000006943.1
ENSORLG00000005515.1	ENSORLT00000006946.1	ENSORLP00000006945.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-40	135.4	193	234
UBD/Beta-Prp	9.70e-55	186.1	147	352

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvWDlrtgvllks 38
           gH+++v cl++    +++++vsG+ D++  vWD+r+g +++s
   Q: 193  GHAADVLCLDLapseTGNTFVSGGCDKKANVWDMRSGQCIQS 234
           8***********9644499********************986 PP

UBD/Beta-Prp

   S: 46   rslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp..sgdklvsGshdrtirvwdletgqcleet 132
           +s+  h++  +a++f +++  ++t+s D+t  +wd+++g+ +++++gh ++vl+l++ p  +g+++vsG+ d+ ++vwd+++gqc++  
   Q: 147  KSVAMHTNYLSACSFTNSDMQILTSSGDGTCALWDVESGQLLQSFHGHAADVLCLDLAPseTGNTFVSGGCDKKANVWDMRSGQCIQ-S 234
           567889999*********99***************************************9778************************.* PP
   S: 133  lsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlng 220
           ++ h++ +n+v++ p+g+ ++sGs+D t+rl+dl+ ++ +    ++     v s++f+ +g+ l  g +d t+++wd+ +g+ v +l g
   Q: 235  FETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYsKESIIFGVSSVDFSLSGRLLFGGYNDYTINVWDVLKGTRVSILFG 323
           ******************************************9644467899************************************* PP
   S: 221  htdnvksvrfspnderlvsgssDgsiriW 249
           h++ v+ +r+sp+++ + +gs D ++r+W
   Q: 324  HENRVSTLRVSPDGTAFCTGSWDHTLRVW 352
           ***************************** PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MATQEVPLNE TLAHLKTESE TLKLKLEEER AKLHDVELHQ VAEKVEGLGQ FVMKTRRTLK 60
GHGNKVLCMD WCKDKRRIVS SSQDGKVIVW DAFTTNKEHA VTMPCTWVMA CAYAPSGCAV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGACAC AGGAGGTTCC GCTGAACGAG ACTCTGGCTC ACCTCAAAAC GGAGTCGGAG 60
ACGCTGAAGC TGAAGCTGGA GGAGGAACGA GCGAAGCTGC ACGATGTCGA GTGTGAGTGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0060047--P:heart contraction
GO:0007634--P:optokinetic behavior
GO:0007165--P:signal transduction
GO:0036269--P:swimming behavior

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001811	Ailuropoda melanoleuca	89.88	0.00e+00	648.00
IUUC-Apl-003399	Anas platyrhynchos	94.89	0.00e+00	631.00
IUUC-Aca-004861	Anolis carolinensis	92.33	0.00e+00	687.00
IUUC-Ame-011851	Astyanax mexicanus	96.01	0.00e+00	704.00
IUUC-Bta-012438	Bos taurus	92.05	0.00e+00	686.00
IUUC-Cel-018408	Caenorhabditis elegans	63.66	2.00e-136	478.00
IUUC-Cja-019086	Callithrix jacchus	92.59	0.00e+00	687.00
IUUC-Cfa-021255	Canis familiaris	95.03	0.00e+00	652.00
IUUC-Cpo-021398	Cavia porcellus	90.93	0.00e+00	675.00
IUUC-Csa-023776	Chlorocebus sabaeus	92.61	0.00e+00	691.00
IUUC-Cin-025305	Ciona intestinalis	58.90	6.00e-133	466.00
IUUC-Csv-026058	Ciona savignyi	58.36	9.00e-128	449.00
IUUC-Dre-028572	Danio rerio	92.94	0.00e+00	689.00
IUUC-Dor-031013	Dipodomys ordii	94.90	1.00e-148	518.00
IUUC-Dme-031889	Drosophila melanogaster	67.93	9.00e-147	512.00
IUUC-Eca-033977	Equus caballus	88.86	0.00e+00	658.00
IUUC-Eeu-035079	Erinaceus europaeus	91.76	0.00e+00	686.00
IUUC-Fca-035693	Felis catus	93.19	0.00e+00	643.00
IUUC-Fal-037345	Ficedula albicollis	91.76	0.00e+00	687.00
IUUC-Gmo-039222	Gadus morhua	96.88	0.00e+00	681.00
IUUC-Gga-040320	Gallus gallus	92.61	0.00e+00	689.00
IUUC-Gac-042644	Gasterosteus aculeatus	98.01	0.00e+00	721.00
IUUC-Ggo-044489	Gorilla gorilla	88.14	0.00e+00	652.00
IUUC-Hsa-046434	Homo sapiens	92.61	0.00e+00	691.00
IUUC-Itr-048771	Ictidomys tridecemlineatus	89.24	9.00e-171	592.00
IUUC-Laf-054255	Loxodonta africana	91.74	0.00e+00	680.00
IUUC-Mcc-055610	Macaca mulatta	92.59	0.00e+00	687.00
IUUC-Meu-056819	Macropus eugenii	92.95	1.00e-175	608.00
IUUC-Mga-059740	Meleagris gallopavo	94.08	0.00e+00	640.00
IUUC-Mmr-061221	Microcebus murinus	92.61	0.00e+00	688.00
IUUC-Mdo-062619	Monodelphis domestica	92.33	0.00e+00	688.00
IUUC-Mmu-064266	Mus musculus	92.33	0.00e+00	689.00
IUUC-Mpu-065766	Mustela putorius furo	94.67	2.00e-175	607.00
IUUC-Mlu-067221	Myotis lucifugus	87.25	0.00e+00	637.00
IUUC-Nle-069515	Nomascus leucogenys	94.60	0.00e+00	637.00
IUUC-Opr-070195	Ochotona princeps	83.81	7.00e-175	606.00
IUUC-Oan-072899	Ornithorhynchus anatinus	96.22	9.00e-105	371.00
IUUC-Ocu-074666	Oryctolagus cuniculus	95.33	6.00e-176	609.00
IUUC-Oga-089090	Otolemur garnettii	92.09	0.00e+00	684.00
IUUC-Oar-090017	Ovis aries	89.77	0.00e+00	639.00
IUUC-Ptr-091280	Pan troglodytes	94.62	0.00e+00	639.00
IUUC-Pan-092198	Papio anubis	94.01	0.00e+00	637.00
IUUC-Pfo-097182	Poecilia formosa	98.30	0.00e+00	691.00
IUUC-Pab-098157	Pongo abelii	92.61	0.00e+00	692.00
IUUC-Pca-100988	Procavia capensis	69.60	6.00e-134	470.00
IUUC-Pva-102232	Pteropus vampyrus	80.00	5.00e-165	573.00
IUUC-Rno-105526	Rattus norvegicus	88.73	0.00e+00	652.00
IUUC-Sce-106298	Saccharomyces cerevisiae	36.11	3.00e-68	251.00
IUUC-Sha-106754	Sarcophilus harrisii	92.90	0.00e+00	650.00
IUUC-Ssc-115390	Sus scrofa	92.63	0.00e+00	686.00
IUUC-Tgu-117377	Taeniopygia guttata	94.27	0.00e+00	632.00
IUUC-Tru-117938	Takifugu rubripes	98.58	0.00e+00	685.00
IUUC-Tsy-119392	Tarsius syrichta	78.95	4.00e-156	543.00
IUUC-Tbe-127469	Tupaia belangeri	91.57	0.00e+00	651.00
IUUC-Ttr-128252	Tursiops truncatus	91.76	0.00e+00	677.00
IUUC-Vpa-130173	Vicugna pacos	86.33	2.00e-132	465.00
IUUC-Xtr-131803	Xenopus tropicalis	92.90	0.00e+00	655.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence